RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C STB3Q12427 513 aa8.56□□□□□ -1.04
PEX12YMR026C RPC31P17890 251 aa8.55□□□□□ -1.04
PEX12YMR026C ACF4P47129 309 aa8.55□□□□□ -1.04
PEX12YMR026C RPB10P22139 70 aa8.54□□□□□ -1.04
PEX12YMR026C GRS1P38088 690 aaKnown RBP8.54□□□□□ -1.04
PEX12YMR026C SPR3P41901 512 aa8.54□□□□□ -1.04
PEX12YMR026C MDJ2P42834 146 aa8.54□□□□□ -1.04
PEX12YMR026C SKP1P52286 194 aa8.54□□□□□ -1.04
PEX12YMR026C SUT1P53032 299 aaKnown RBP8.54□□□□□ -1.04
PEX12YMR026C KTR2P33550 425 aa8.53□□□□□ -1.04
PEX12YMR026C HXT8P40886 569 aa8.53□□□□□ -1.04
PEX12YMR026C KRE33P53914 1056 aaKnown RBP8.52□□□□□ -1.05
PEX12YMR026C CUS1Q02554 436 aaPredicted RBP8.52□□□□□ -1.05
PEX12YMR026C NOP8Q08287 484 aaPredicted RBP8.51□□□□□ -1.05
PEX12YMR026C YOR296WQ08748 1289 aa8.5□□□□□ -1.05
PEX12YMR026C RPP1AP05318 106 aaPredicted RBP8.49□□□□□ -1.05
PEX12YMR026C MSN1P22148 382 aa8.49□□□□□ -1.05
PEX12YMR026C NAB2P32505 525 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05 RIP-Chip
PEX12YMR026C GIP1P38229 639 aa8.49□□□□□ -1.05
PEX12YMR026C CEM1P39525 442 aa8.49□□□□□ -1.05
PEX12YMR026C ADE12P80210 433 aaKnown RBP8.49□□□□□ -1.05
PEX12YMR026C YDR461C-AQ2V2P7 80 aa8.49□□□□□ -1.05
PEX12YMR026C ISW1P38144 1129 aa8.48□□□□□ -1.05
PEX12YMR026C BSD2P38356 321 aa8.48□□□□□ -1.05
PEX12YMR026C STM1P39015 273 aaKnown RBP8.48□□□□□ -1.05
PEX12YMR026C FIR1P40020 876 aa8.48□□□□□ -1.05
PEX12YMR026C SMC1P32908 1225 aa8.47□□□□□ -1.05
PEX12YMR026C SLD2P34252 453 aa8.47□□□□□ -1.05
PEX12YMR026C APM2P38700 605 aa8.47□□□□□ -1.05
PEX12YMR026C YNR040WP53736 256 aa8.47□□□□□ -1.05
PEX12YMR026C SYT1Q06836 1226 aa8.47□□□□□ -1.05
PEX12YMR026C FPS1P23900 669 aa8.46□□□□□ -1.06
PEX12YMR026C NCL1P38205 684 aaKnown RBP8.46□□□□□ -1.06
PEX12YMR026C LYS5P50113 272 aa8.46□□□□□ -1.06
PEX12YMR026C UFD2P54860 961 aa8.46□□□□□ -1.06
PEX12YMR026C TRS120Q04183 1289 aa8.46□□□□□ -1.06
PEX12YMR026C YBR287WP38355 427 aa8.45□□□□□ -1.06
PEX12YMR026C YHL050CP38721 697 aa8.45□□□□□ -1.06
PEX12YMR026C YHR219WP38900 624 aa8.45□□□□□ -1.06
PEX12YMR026C RGD2P43556 714 aa8.45□□□□□ -1.06
PEX12YMR026C HPF1Q05164 967 aa8.45□□□□□ -1.06
PEX12YMR026C NUT2Q06213 157 aa8.45□□□□□ -1.06
PEX12YMR026C NTA1P40354 457 aa8.44□□□□□ -1.06
PEX12YMR026C ITC1P53125 1264 aa8.44□□□□□ -1.06
PEX12YMR026C SEN54Q02825 467 aaPredicted RBP8.44□□□□□ -1.06
PEX12YMR026C FRT1Q99332 602 aa8.44□□□□□ -1.06
PEX12YMR026C MSC7P38694 644 aa8.43□□□□□ -1.06
PEX12YMR026C HEH2Q03281 663 aa8.43□□□□□ -1.06
PEX12YMR026C MSC6Q08818 692 aaKnown RBP8.43□□□□□ -1.06
PEX12YMR026C RAD55P38953 406 aa8.42□□□□□ -1.06
PEX12YMR026C YPL062WQ02781 134 aa8.42□□□□□ -1.06
PEX12YMR026C YGR035CP53222 116 aa8.41□□□□□ -1.06
PEX12YMR026C TY1A-DR2Q03964 440 aaKnown RBP8.41□□□□□ -1.06
PEX12YMR026C MNL2Q12205 849 aa8.41□□□□□ -1.06
PEX12YMR026C IRS4P36115 615 aaKnown RBP8.4□□□□□ -1.06
PEX12YMR026C DPH6Q12429 685 aa8.4□□□□□ -1.06
PEX12YMR026C TIF6Q12522 245 aaKnown RBP8.4□□□□□ -1.06
PEX12YMR026C SEC20P28791 383 aa8.39□□□□□ -1.07
PEX12YMR026C YIL165CP40446 119 aa8.39□□□□□ -1.07
PEX12YMR026C JJJ3P47138 172 aa8.39□□□□□ -1.07
PEX12YMR026C EMG1Q06287 252 aaKnown RBP8.39□□□□□ -1.07
PEX12YMR026C PPX1P38698 397 aa8.38□□□□□ -1.07
PEX12YMR026C AIM46P38885 310 aa8.38□□□□□ -1.07
PEX12YMR026C IPL1P38991 367 aa8.38□□□□□ -1.07
PEX12YMR026C PSY2P40164 858 aa8.38□□□□□ -1.07
PEX12YMR026C YNL011CP53980 444 aa8.38□□□□□ -1.07
PEX12YMR026C YER156CP40093 338 aaKnown RBP8.37□□□□□ -1.07
PEX12YMR026C RSC4Q02206 625 aa8.37□□□□□ -1.07
PEX12YMR026C GPI13Q07830 1017 aa8.37□□□□□ -1.07
PEX12YMR026C IDI1P15496 288 aa8.35□□□□□ -1.07
PEX12YMR026C PRK1P40494 810 aa8.35□□□□□ -1.07
PEX12YMR026C CDC55Q00362 526 aa8.34□□□□□ -1.07
PEX12YMR026C GPM1P00950 247 aaKnown RBP8.32□□□□□ -1.08
PEX12YMR026C THI12P42883 340 aa8.32□□□□□ -1.08
PEX12YMR026C THI5P43534 340 aa8.32□□□□□ -1.08
PEX12YMR026C THI11P47183 340 aa8.32□□□□□ -1.08
PEX12YMR026C RSC2Q06488 889 aa8.32□□□□□ -1.08
PEX12YMR026C THI13Q07748 340 aa8.32□□□□□ -1.08
PEX12YMR026C WHI5Q12416 295 aa8.32□□□□□ -1.08
PEX12YMR026C TRK2P28584 889 aa8.31□□□□□ -1.08
PEX12YMR026C HEM3P28789 327 aa8.31□□□□□ -1.08
PEX12YMR026C PDC5P16467 563 aaKnown RBP8.3□□□□□ -1.08
PEX12YMR026C PPT1P53043 513 aa8.3□□□□□ -1.08
PEX12YMR026C KNS1P32350 737 aaPredicted RBP8.29□□□□□ -1.08
PEX12YMR026C MET4P32389 672 aa8.29□□□□□ -1.08
PEX12YMR026C BSC2Q05611 235 aa8.29□□□□□ -1.08
PEX12YMR026C MRP10O75012 95 aa8.28□□□□□ -1.08
PEX12YMR026C SAM37P50110 327 aa8.27□□□□□ -1.09
PEX12YMR026C CTR9P89105 1077 aa8.27□□□□□ -1.09
PEX12YMR026C PHO4P07270 312 aaKnown RBP8.26□□□□□ -1.09
PEX12YMR026C PYC2P32327 1180 aaKnown RBP8.26□□□□□ -1.09
PEX12YMR026C YJL181WP46987 611 aa8.26□□□□□ -1.09
PEX12YMR026C INP51P40559 946 aaKnown RBP8.24□□□□□ -1.09
PEX12YMR026C NOC3Q07896 663 aaPredicted RBP8.24□□□□□ -1.09
PEX12YMR026C FUS1P11710 512 aa8.23□□□□□ -1.09
PEX12YMR026C YHL008CP38750 627 aa8.23□□□□□ -1.09
PEX12YMR026C COBP00163 385 aa8.22□□□□□ -1.09
PEX12YMR026C FLP1P03870 423 aa8.22□□□□□ -1.09
PEX12YMR026C GCD6P32501 712 aaKnown RBP8.22□□□□□ -1.09
PEX12YMR026C VPS35P34110 944 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms