RNA–Protein interactions for RNA: YML010W

SPT5, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT5, Length 3,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT5YML010W SRP40P32583 406 aaPredicted RBP14.93□□□□□ -0.02
SPT5YML010W PRP45P28004 379 aaPredicted RBP14.92□□□□□ -0.02
SPT5YML010W TPM1P17536 199 aaKnown RBP14.91□□□□□ -0.02
SPT5YML010W DEP1P31385 405 aa14.91□□□□□ -0.02
SPT5YML010W XKS1P42826 600 aa14.91□□□□□ -0.02
SPT5YML010W CLB1P24868 471 aa14.91□□□□□ -0.02
SPT5YML010W SSF1P38789 453 aaPredicted RBP14.91□□□□□ -0.02
SPT5YML010W GSY2P27472 705 aa14.89□□□□□ -0.03
SPT5YML010W PCH2P38126 564 aa14.88□□□□□ -0.03
SPT5YML010W TLG2Q08144 397 aa14.88□□□□□ -0.03
SPT5YML010W APL2P36000 726 aaPredicted RBP14.88□□□□□ -0.03
SPT5YML010W AI2P03876 854 aa14.87□□□□□ -0.03
SPT5YML010W MSH4P40965 878 aaPredicted RBP14.87□□□□□ -0.03
SPT5YML010W COG4Q06096 861 aa14.87□□□□□ -0.03
SPT5YML010W YKL068W-AQ3E826 78 aa14.87□□□□□ -0.03
SPT5YML010W MEC3Q02574 474 aa14.87□□□□□ -0.03
SPT5YML010W PSK2Q08217 1101 aa14.87□□□□□ -0.03
SPT5YML010W APL4Q12028 832 aa14.87□□□□□ -0.03
SPT5YML010W SSK22P25390 1331 aaPredicted RBP14.87□□□□□ -0.03
SPT5YML010W PET123P17558 318 aa14.86□□□□□ -0.03
SPT5YML010W BBC1P47068 1157 aa14.86□□□□□ -0.03
SPT5YML010W CDC15P27636 974 aa14.86□□□□□ -0.03
SPT5YML010W BUD6P41697 788 aa14.85□□□□□ -0.03
SPT5YML010W YPT11P48559 417 aa14.85□□□□□ -0.03
SPT5YML010W IMP2'P32351 346 aa14.85□□□□□ -0.03
SPT5YML010W GDT1P38301 280 aaPredicted RBP14.85□□□□□ -0.03
SPT5YML010W ESF1Q06344 628 aaKnown RBP14.85□□□□□ -0.03
SPT5YML010W RRP43P25359 394 aaPredicted RBP14.84□□□□□ -0.03
SPT5YML010W MRC1P25588 1096 aa14.84□□□□□ -0.03
SPT5YML010W YHL017WP38745 532 aa14.84□□□□□ -0.03
SPT5YML010W YKE2P52553 114 aa14.84□□□□□ -0.03
SPT5YML010W EPS1P40557 701 aa14.83□□□□□ -0.03
SPT5YML010W EPL1P43572 832 aa14.83□□□□□ -0.03
SPT5YML010W FCP1Q03254 732 aa14.83□□□□□ -0.03
SPT5YML010W YGL140CP53120 1219 aa14.83□□□□□ -0.04
SPT5YML010W PSY4P38193 441 aa14.83□□□□□ -0.04
SPT5YML010W FBP26P32604 452 aa14.82□□□□□ -0.04
SPT5YML010W YJR008WP47085 338 aa14.82□□□□□ -0.04
SPT5YML010W SWE1P32944 819 aa14.82□□□□□ -0.04
SPT5YML010W RRB1Q04225 511 aaKnown RBP14.81□□□□□ -0.04
SPT5YML010W MATALPHA2P0CY08 210 aa14.81□□□□□ -0.04
SPT5YML010W HMLALPHA2P0CY09 210 aa14.81□□□□□ -0.04
SPT5YML010W MCM4P30665 933 aaKnown RBP14.81□□□□□ -0.04
SPT5YML010W STR2P47164 639 aa14.8□□□□□ -0.04
SPT5YML010W TMA16Q08687 178 aa14.8□□□□□ -0.04
SPT5YML010W SML1Q04964 104 aa14.79□□□□□ -0.04
SPT5YML010W PKH1Q03407 766 aa14.79□□□□□ -0.04
SPT5YML010W GYL1Q04322 720 aa14.79□□□□□ -0.04
SPT5YML010W TCB1Q12466 1186 aa14.79□□□□□ -0.04
SPT5YML010W HSP82P02829 709 aaKnown RBP14.79□□□□□ -0.04
SPT5YML010W THI12P42883 340 aa14.79□□□□□ -0.04
SPT5YML010W THI5P43534 340 aa14.79□□□□□ -0.04
SPT5YML010W THI11P47183 340 aa14.79□□□□□ -0.04
SPT5YML010W RPN7Q06103 429 aaKnown RBP14.79□□□□□ -0.04
SPT5YML010W THI13Q07748 340 aa14.79□□□□□ -0.04
SPT5YML010W OSM1P21375 501 aaKnown RBP14.78□□□□□ -0.04
SPT5YML010W VPS41P38959 992 aa14.78□□□□□ -0.04
SPT5YML010W ECM1P39715 212 aa14.78□□□□□ -0.04
SPT5YML010W PET111P08468 800 aa14.77□□□□□ -0.04
SPT5YML010W MED8P38304 223 aa14.77□□□□□ -0.04
SPT5YML010W ADE16P54113 591 aaKnown RBP14.77□□□□□ -0.04
SPT5YML010W YMR102CQ03177 834 aa14.77□□□□□ -0.04
SPT5YML010W YLR407WQ06070 228 aa14.77□□□□□ -0.04
SPT5YML010W PSH1Q12161 406 aa14.77□□□□□ -0.04
SPT5YML010W RGP1P16664 663 aa14.77□□□□□ -0.05
SPT5YML010W YMR147WP40218 223 aaKnown RBP14.77□□□□□ -0.05
SPT5YML010W TFG2P41896 400 aaPredicted RBP14.77□□□□□ -0.05
SPT5YML010W PEP3P27801 918 aa14.77□□□□□ -0.05
SPT5YML010W RTT107P38850 1070 aa14.77□□□□□ -0.05
SPT5YML010W MRS2Q01926 470 aa14.76□□□□□ -0.05
SPT5YML010W SAP1P39955 897 aaKnown RBP14.76□□□□□ -0.05
SPT5YML010W MCM16Q12262 181 aa14.76□□□□□ -0.05
SPT5YML010W GIN4Q12263 1142 aa14.76□□□□□ -0.05
SPT5YML010W PDC1P06169 563 aaKnown RBP14.75□□□□□ -0.05
SPT5YML010W RNA1P11745 407 aaKnown RBP14.75□□□□□ -0.05
SPT5YML010W RNT1Q02555 471 aa14.75□□□□□ -0.05
SPT5YML010W SET1P38827 1080 aaKnown RBP14.74□□□□□ -0.05
SPT5YML010W DSN1P40568 576 aa14.74□□□□□ -0.05
SPT5YML010W APT1P49435 187 aaKnown RBP14.74□□□□□ -0.05
SPT5YML010W RBA50Q04418 439 aa14.74□□□□□ -0.05
SPT5YML010W YPR204WQ08995 1032 aa14.74□□□□□ -0.05
SPT5YML010W GYP5Q12344 894 aa14.74□□□□□ -0.05
SPT5YML010W HCA4P20448 770 aaKnown RBP14.74□□□□□ -0.05
SPT5YML010W YKT6P36015 200 aaKnown RBP14.74□□□□□ -0.05
SPT5YML010W VPS75P53853 264 aa14.74□□□□□ -0.05
SPT5YML010W YNL193WP53870 558 aa14.74□□□□□ -0.05
SPT5YML010W MSH1P25846 959 aa14.73□□□□□ -0.05
SPT5YML010W SEC18P18759 758 aaKnown RBP14.73□□□□□ -0.05
SPT5YML010W REI1P38344 393 aaPredicted RBP14.73□□□□□ -0.05
SPT5YML010W YCG1Q06680 1035 aa14.73□□□□□ -0.05
SPT5YML010W UBP16Q02863 499 aa14.72□□□□□ -0.05
SPT5YML010W HXK1P04806 485 aaKnown RBP14.71□□□□□ -0.05
SPT5YML010W UBC1P21734 215 aaKnown RBP14.71□□□□□ -0.05
SPT5YML010W SEC9P40357 651 aa14.71□□□□□ -0.05
SPT5YML010W RMT2Q03305 412 aa14.71□□□□□ -0.05
SPT5YML010W ECM23Q02710 187 aa14.71□□□□□ -0.06
SPT5YML010W MGA2P40578 1113 aa14.7□□□□□ -0.06
SPT5YML010W RFT1P38206 574 aaPredicted RBP14.7□□□□□ -0.06
SPT5YML010W YBP2P53169 641 aa14.7□□□□□ -0.06
SPT5YML010W AFT2Q08957 416 aa14.69□□□□□ -0.06
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms