RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W PDR18P53756 1333 aa8.22□□□□□ -1.09
CTF3YLR381W PSK1P31374 1356 aa8.22□□□□□ -1.09
CTF3YLR381W RAV1P47104 1357 aa8.22□□□□□ -1.09
CTF3YLR381W ULS1Q08562 1619 aa8.22□□□□□ -1.09
CTF3YLR381W KRS1P15180 591 aaKnown RBP8.22□□□□□ -1.09
CTF3YLR381W YEL1P34225 687 aa8.22□□□□□ -1.09
CTF3YLR381W LHS1P36016 881 aa8.22□□□□□ -1.09
CTF3YLR381W ILM1P47155 203 aa8.22□□□□□ -1.09
CTF3YLR381W SSL2Q00578 843 aa8.22□□□□□ -1.09
CTF3YLR381W CDC60P26637 1090 aaKnown RBP8.21□□□□□ -1.09
CTF3YLR381W SEC66P33754 206 aa8.21□□□□□ -1.09
CTF3YLR381W TFC3P34111 1160 aa8.21□□□□□ -1.09
CTF3YLR381W MUD2P36084 527 aaKnown RBP8.21□□□□□ -1.09
CTF3YLR381W ALD4P46367 519 aaKnown RBP8.21□□□□□ -1.09
CTF3YLR381W EIS1Q05050 843 aaKnown RBP8.21□□□□□ -1.09
CTF3YLR381W YRF1-4O13559 1382 aa8.21□□□□□ -1.1
CTF3YLR381W PRP16P15938 1071 aaPredicted RBP8.21□□□□□ -1.1
CTF3YLR381W FAR1P21268 830 aa8.21□□□□□ -1.1
CTF3YLR381W SWC3P31376 625 aa8.21□□□□□ -1.1
CTF3YLR381W TTI1P36097 1038 aa8.21□□□□□ -1.1
CTF3YLR381W SRL3P36167 246 aa8.21□□□□□ -1.1
CTF3YLR381W ATG14P38270 344 aa8.21□□□□□ -1.1
CTF3YLR381W VID28P40547 921 aa8.21□□□□□ -1.1
CTF3YLR381W SEC27P41811 889 aaKnown RBP8.21□□□□□ -1.1
CTF3YLR381W SAP155P43612 1002 aa8.21□□□□□ -1.1
CTF3YLR381W YEF3P16521 1044 aaKnown RBP8.2□□□□□ -1.1
CTF3YLR381W KDX1P36005 433 aa8.2□□□□□ -1.1
CTF3YLR381W CLB4P24871 460 aa8.19□□□□□ -1.1
CTF3YLR381W SET2P46995 733 aaKnown RBP8.19□□□□□ -1.1
CTF3YLR381W DSL1P53847 754 aa8.19□□□□□ -1.1
CTF3YLR381W GCR2Q01722 534 aa8.19□□□□□ -1.1
CTF3YLR381W FMP30Q02883 468 aa8.19□□□□□ -1.1
CTF3YLR381W MRD1Q06106 887 aaKnown RBP8.19□□□□□ -1.1
CTF3YLR381W APC2Q12440 853 aa8.19□□□□□ -1.1
CTF3YLR381W BRR1Q99177 341 aaPredicted RBP8.19□□□□□ -1.1
CTF3YLR381W BUD14P27637 709 aa8.19□□□□□ -1.1
CTF3YLR381W LYS2P07702 1392 aa8.19□□□□□ -1.1
CTF3YLR381W YSW1P38280 609 aa8.18□□□□□ -1.1
CTF3YLR381W CTH1P47976 325 aa8.18□□□□□ -1.1
CTF3YLR381W SNF2P22082 1703 aa8.18□□□□□ -1.1
CTF3YLR381W PRT1P06103 763 aaKnown RBP8.18□□□□□ -1.1
CTF3YLR381W SUI3P09064 285 aaKnown RBP8.18□□□□□ -1.1
CTF3YLR381W NAT1P12945 854 aaKnown RBP8.18□□□□□ -1.1
CTF3YLR381W RME1P32338 300 aaKnown RBP8.18□□□□□ -1.1
CTF3YLR381W CSE1P33307 960 aa8.18□□□□□ -1.1
CTF3YLR381W FAP1P53971 965 aa8.18□□□□□ -1.1
CTF3YLR381W STE23Q06010 1027 aa8.18□□□□□ -1.1
CTF3YLR381W MMR1Q06324 491 aa8.18□□□□□ -1.1
CTF3YLR381W PMR1P13586 950 aa8.17□□□□□ -1.1
CTF3YLR381W ATE1P16639 503 aa8.17□□□□□ -1.1
CTF3YLR381W ASF1P32447 279 aa8.17□□□□□ -1.1
CTF3YLR381W YLF2P38746 405 aa8.17□□□□□ -1.1
CTF3YLR381W RNR2P09938 399 aaKnown RBP8.17□□□□□ -1.1
CTF3YLR381W GAL11P19659 1081 aa8.17□□□□□ -1.1
CTF3YLR381W HIR2P32480 875 aa8.17□□□□□ -1.1
CTF3YLR381W ECM4P36156 370 aa8.17□□□□□ -1.1
CTF3YLR381W ERB1Q04660 807 aaKnown RBP8.17□□□□□ -1.1
CTF3YLR381W FAR8Q05040 523 aa8.17□□□□□ -1.1
CTF3YLR381W RUD3Q12234 484 aaKnown RBP8.17□□□□□ -1.1
CTF3YLR381W TRL1P09880 827 aaKnown RBP8.16□□□□□ -1.1
CTF3YLR381W RPN2P32565 945 aaKnown RBP8.16□□□□□ -1.1
CTF3YLR381W LIN1P38852 340 aaPredicted RBP8.16□□□□□ -1.1
CTF3YLR381W VPS8P39702 1274 aa8.16□□□□□ -1.1
CTF3YLR381W CCT5P40413 562 aaKnown RBP8.16□□□□□ -1.1
CTF3YLR381W GCN20P43535 752 aaKnown RBP8.16□□□□□ -1.1
CTF3YLR381W BNI4P53858 892 aa8.16□□□□□ -1.1
CTF3YLR381W NCS2P53923 493 aaPredicted RBP8.16□□□□□ -1.1
CTF3YLR381W RBA50Q04418 439 aa8.16□□□□□ -1.1
CTF3YLR381W YPR172WQ06608 200 aa8.16□□□□□ -1.1
CTF3YLR381W PDR1P12383 1068 aa8.15□□□□□ -1.1
CTF3YLR381W TRK1P12685 1235 aa8.15□□□□□ -1.1
CTF3YLR381W GCD2P12754 651 aaPredicted RBP8.15□□□□□ -1.1
CTF3YLR381W TUP1P16649 713 aa8.15□□□□□ -1.1
CTF3YLR381W CPS1P27614 576 aa8.15□□□□□ -1.1
CTF3YLR381W PDB1P32473 366 aaKnown RBP8.15□□□□□ -1.1
CTF3YLR381W PET112P33893 541 aa8.15□□□□□ -1.1
CTF3YLR381W LSG1P53145 640 aaKnown RBP8.15□□□□□ -1.1
CTF3YLR381W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1 RIP-Chip
CTF3YLR381W PKH1Q03407 766 aa8.15□□□□□ -1.1
CTF3YLR381W SPN1Q06505 410 aaPredicted RBP8.15□□□□□ -1.1
CTF3YLR381W SWI1P09547 1314 aa8.15□□□□□ -1.1
CTF3YLR381W SEC6P32844 805 aa8.15□□□□□ -1.1
CTF3YLR381W PTH2P34222 208 aa8.15□□□□□ -1.1
CTF3YLR381W SEC5P89102 971 aa8.15□□□□□ -1.1
CTF3YLR381W MFM1Q02783 413 aa8.15□□□□□ -1.1
CTF3YLR381W SRC1Q03707 834 aa8.15□□□□□ -1.1
CTF3YLR381W DPL1Q05567 589 aa8.15□□□□□ -1.1
CTF3YLR381W DNL4Q08387 944 aaPredicted RBP8.15□□□□□ -1.1
CTF3YLR381W MET7Q08645 548 aa8.15□□□□□ -1.1
CTF3YLR381W TAL1P15019 335 aaKnown RBP8.14□□□□□ -1.11
CTF3YLR381W UBP1P25037 809 aa8.14□□□□□ -1.11
CTF3YLR381W RAD5P32849 1169 aaPredicted RBP8.14□□□□□ -1.11
CTF3YLR381W YKR018CP36114 725 aa8.14□□□□□ -1.11
CTF3YLR381W OSH3P38713 996 aaKnown RBP8.14□□□□□ -1.11
CTF3YLR381W CCT4P39078 528 aaKnown RBP8.14□□□□□ -1.11
CTF3YLR381W NUP60P39705 539 aa8.14□□□□□ -1.11
CTF3YLR381W VPS53P47061 822 aa8.14□□□□□ -1.11
CTF3YLR381W GYP7P48365 746 aa8.14□□□□□ -1.11
CTF3YLR381W RIA1P53893 1110 aa8.14□□□□□ -1.11
CTF3YLR381W BET4Q00618 327 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms