RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W CUS1Q02554 436 aaPredicted RBP6.12□□□□□ -1.43
VPS38YLR360W HAT1Q12341 374 aa6.12□□□□□ -1.43
VPS38YLR360W RPP1AP05318 106 aaPredicted RBP6.1□□□□□ -1.43
VPS38YLR360W BOI1P38041 980 aaKnown RBP6.1□□□□□ -1.43
VPS38YLR360W GLO3P38682 493 aaKnown RBP6.1□□□□□ -1.43
VPS38YLR360W SUT1P53032 299 aaKnown RBP6.1□□□□□ -1.43
VPS38YLR360W SYT1Q06836 1226 aa6.1□□□□□ -1.43
VPS38YLR360W YDR461C-AQ2V2P7 80 aa6.1□□□□□ -1.43
VPS38YLR360W LSO1Q3E827 93 aa6.1□□□□□ -1.43
VPS38YLR360W RPC31P17890 251 aa6.08□□□□□ -1.44
VPS38YLR360W QDR1P40475 563 aa6.08□□□□□ -1.44
VPS38YLR360W DPH6Q12429 685 aa6.08□□□□□ -1.44
VPS38YLR360W NCL1P38205 684 aaKnown RBP6.07□□□□□ -1.44
VPS38YLR360W APM2P38700 605 aa6.07□□□□□ -1.44
VPS38YLR360W FIR1P40020 876 aa6.07□□□□□ -1.44
VPS38YLR360W HXT8P40886 569 aa6.07□□□□□ -1.44
VPS38YLR360W SKP1P52286 194 aa6.07□□□□□ -1.44
VPS38YLR360W YBL113CQ7M4S9 792 aa6.07□□□□□ -1.44
VPS38YLR360W RPB10P22139 70 aa6.06□□□□□ -1.44
VPS38YLR360W NAB2P32505 525 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44 RIP-Chip
VPS38YLR360W GRS1P38088 690 aaKnown RBP6.06□□□□□ -1.44
VPS38YLR360W GIP1P38229 639 aa6.06□□□□□ -1.44
VPS38YLR360W BSD2P38356 321 aa6.06□□□□□ -1.44
VPS38YLR360W MSN1P22148 382 aa6.05□□□□□ -1.44
VPS38YLR360W ISW1P38144 1129 aa6.05□□□□□ -1.44
VPS38YLR360W ERP5P38819 212 aa6.05□□□□□ -1.44
VPS38YLR360W JJJ3P47138 172 aa6.05□□□□□ -1.44
VPS38YLR360W ATG1P53104 897 aa6.05□□□□□ -1.44
VPS38YLR360W YNR040WP53736 256 aa6.05□□□□□ -1.44
VPS38YLR360W YOR296WQ08748 1289 aa6.05□□□□□ -1.44
VPS38YLR360W APC11Q12157 165 aa6.05□□□□□ -1.44
VPS38YLR360W TRL1P09880 827 aaKnown RBP6.03□□□□□ -1.44
VPS38YLR360W HEH2Q03281 663 aa6.03□□□□□ -1.44
VPS38YLR360W MTC5Q03897 1148 aa6.03□□□□□ -1.44
VPS38YLR360W TY1A-DR2Q03964 440 aaKnown RBP6.03□□□□□ -1.44
VPS38YLR360W YBR287WP38355 427 aa6.02□□□□□ -1.45
VPS38YLR360W MSC7P38694 644 aa6.02□□□□□ -1.45
VPS38YLR360W ITC1P53125 1264 aa6.02□□□□□ -1.45
VPS38YLR360W SMC1P32908 1225 aa6.01□□□□□ -1.45
VPS38YLR360W KTR2P33550 425 aa6.01□□□□□ -1.45
VPS38YLR360W ACF4P47129 309 aa6.01□□□□□ -1.45
VPS38YLR360W RAD55P38953 406 aa6□□□□□ -1.45
VPS38YLR360W MDJ2P42834 146 aa6□□□□□ -1.45
VPS38YLR360W SSF1P38789 453 aaPredicted RBP5.99□□□□□ -1.45
VPS38YLR360W RGD2P43556 714 aa5.99□□□□□ -1.45
VPS38YLR360W GPM1P00950 247 aaKnown RBP5.99□□□□□ -1.45
VPS38YLR360W AIM46P38885 310 aa5.99□□□□□ -1.45
VPS38YLR360W NTA1P40354 457 aa5.99□□□□□ -1.45
VPS38YLR360W YIL165CP40446 119 aa5.99□□□□□ -1.45
VPS38YLR360W PDC5P16467 563 aaKnown RBP5.98□□□□□ -1.45
VPS38YLR360W PRK1P40494 810 aa5.98□□□□□ -1.45
VPS38YLR360W UFD2P54860 961 aa5.98□□□□□ -1.45
VPS38YLR360W EMG1Q06287 252 aaKnown RBP5.98□□□□□ -1.45
VPS38YLR360W IDI1P15496 288 aa5.97□□□□□ -1.45
VPS38YLR360W MDJ1P35191 511 aa5.97□□□□□ -1.45
VPS38YLR360W IRS4P36115 615 aaKnown RBP5.97□□□□□ -1.45
VPS38YLR360W YJL181WP46987 611 aa5.97□□□□□ -1.45
VPS38YLR360W TRS120Q04183 1289 aa5.97□□□□□ -1.45
VPS38YLR360W THI72Q08579 599 aa5.97□□□□□ -1.45
VPS38YLR360W TIF6Q12522 245 aaKnown RBP5.97□□□□□ -1.45
VPS38YLR360W AI1P03875 834 aa5.96□□□□□ -1.46
VPS38YLR360W KNS1P32350 737 aaPredicted RBP5.96□□□□□ -1.46
VPS38YLR360W YHL050CP38721 697 aa5.96□□□□□ -1.46
VPS38YLR360W YHR219WP38900 624 aa5.96□□□□□ -1.46
VPS38YLR360W ICP55P40051 511 aa5.96□□□□□ -1.46
VPS38YLR360W YER156CP40093 338 aaKnown RBP5.96□□□□□ -1.46
VPS38YLR360W PSY2P40164 858 aa5.96□□□□□ -1.46
VPS38YLR360W PPT1P53043 513 aa5.95□□□□□ -1.46
VPS38YLR360W YML020WQ03722 664 aa5.95□□□□□ -1.46
VPS38YLR360W NUT2Q06213 157 aa5.95□□□□□ -1.46
VPS38YLR360W RSC2Q06488 889 aa5.95□□□□□ -1.46
VPS38YLR360W FRT1Q99332 602 aa5.95□□□□□ -1.46
VPS38YLR360W STM1P39015 273 aaKnown RBP5.94□□□□□ -1.46
VPS38YLR360W YNR014WP53719 212 aa5.94□□□□□ -1.46
VPS38YLR360W MRP10O75012 95 aa5.93□□□□□ -1.46
VPS38YLR360W SBE2P42223 864 aaKnown RBP5.93□□□□□ -1.46
VPS38YLR360W NSG2P53898 299 aa5.93□□□□□ -1.46
VPS38YLR360W YNL011CP53980 444 aa5.93□□□□□ -1.46
VPS38YLR360W SLD2P34252 453 aa5.92□□□□□ -1.46
VPS38YLR360W MET1P36150 593 aa5.92□□□□□ -1.46
VPS38YLR360W PUS1Q12211 544 aaKnown RBP5.92□□□□□ -1.46
VPS38YLR360W PGM2P37012 569 aaKnown RBP5.91□□□□□ -1.46
VPS38YLR360W ALG14P38242 237 aa5.91□□□□□ -1.46
VPS38YLR360W BOI2P39969 1040 aa5.91□□□□□ -1.46
VPS38YLR360W THI12P42883 340 aa5.91□□□□□ -1.46
VPS38YLR360W THI5P43534 340 aa5.91□□□□□ -1.46
VPS38YLR360W THI11P47183 340 aa5.91□□□□□ -1.46
VPS38YLR360W THI13Q07748 340 aa5.91□□□□□ -1.46
VPS38YLR360W MNL2Q12205 849 aa5.91□□□□□ -1.46
VPS38YLR360W RSC4Q02206 625 aa5.9□□□□□ -1.47
VPS38YLR360W MSC6Q08818 692 aaKnown RBP5.9□□□□□ -1.47
VPS38YLR360W PHM7Q12252 991 aa5.9□□□□□ -1.47
VPS38YLR360W ECM2P38241 364 aaKnown RBP5.89□□□□□ -1.47
VPS38YLR360W IPL1P38991 367 aa5.89□□□□□ -1.47
VPS38YLR360W INP51P40559 946 aaKnown RBP5.89□□□□□ -1.47
VPS38YLR360W CDC55Q00362 526 aa5.89□□□□□ -1.47
VPS38YLR360W BSC2Q05611 235 aa5.89□□□□□ -1.47
VPS38YLR360W GPI13Q07830 1017 aa5.89□□□□□ -1.47
VPS38YLR360W NHA1Q99271 985 aa5.89□□□□□ -1.47
VPS38YLR360W NAR1P23503 491 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms