RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeastyeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP2YLR335W RRM3P38766 723 aa5.08□□□□□ -1.6
NUP2YLR335W RIX1P38883 763 aaPredicted RBP5.08□□□□□ -1.6
NUP2YLR335W STM1P39015 273 aaKnown RBP5.08□□□□□ -1.6
NUP2YLR335W TY4B-JP47024 1803 aa5.08□□□□□ -1.6
NUP2YLR335W BBC1P47068 1157 aa5.08□□□□□ -1.6
NUP2YLR335W YPT11P48559 417 aa5.08□□□□□ -1.6
NUP2YLR335W ARP5P53946 755 aa5.08□□□□□ -1.6
NUP2YLR335W NOP53Q12080 455 aaKnown RBP5.08□□□□□ -1.6
NUP2YLR335W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
NUP2YLR335W RSM7P47150 247 aa5.08□□□□□ -1.6
NUP2YLR335W FAR11P53917 953 aa5.08□□□□□ -1.6
NUP2YLR335W ALO1P54783 526 aaKnown RBP5.08□□□□□ -1.6
NUP2YLR335W RMD1Q03441 430 aa5.08□□□□□ -1.6
NUP2YLR335W INP54Q08227 384 aaKnown RBP5.08□□□□□ -1.6
NUP2YLR335W TRS33Q99394 268 aa5.08□□□□□ -1.6
NUP2YLR335W RPL22AP05749 121 aaKnown RBP5.07□□□□□ -1.6
NUP2YLR335W LPD1P09624 499 aaKnown RBP5.07□□□□□ -1.6
NUP2YLR335W OPI1P21957 404 aa5.07□□□□□ -1.6
NUP2YLR335W MBR1P23493 339 aa5.07□□□□□ -1.6
NUP2YLR335W RDS1P25611 832 aa5.07□□□□□ -1.6
NUP2YLR335W YKE2P52553 114 aa5.07□□□□□ -1.6
NUP2YLR335W TCB1Q12466 1186 aa5.07□□□□□ -1.6
NUP2YLR335W URB1P34241 1764 aaKnown RBP5.07□□□□□ -1.6
NUP2YLR335W MATALPHA2P0CY08 210 aa5.06□□□□□ -1.6
NUP2YLR335W HMLALPHA2P0CY09 210 aa5.06□□□□□ -1.6
NUP2YLR335W MFT1P33441 392 aaKnown RBP5.06□□□□□ -1.6
NUP2YLR335W YKT6P36015 200 aaKnown RBP5.06□□□□□ -1.6
NUP2YLR335W MAL33P38157 468 aa5.06□□□□□ -1.6
NUP2YLR335W MGA2P40578 1113 aa5.06□□□□□ -1.6
NUP2YLR335W XKS1P42826 600 aa5.06□□□□□ -1.6
NUP2YLR335W PGI1P12709 554 aaKnown RBP5.06□□□□□ -1.6
NUP2YLR335W RNT1Q02555 471 aa5.06□□□□□ -1.6
NUP2YLR335W MTC5Q03897 1148 aa5.06□□□□□ -1.6
NUP2YLR335W YCG1Q06680 1035 aa5.06□□□□□ -1.6
NUP2YLR335W ALE1Q08548 619 aa5.06□□□□□ -1.6
NUP2YLR335W YIL177CP40434 1758 aa5.06□□□□□ -1.6
NUP2YLR335W YJL225CP40889 1758 aa5.06□□□□□ -1.6
NUP2YLR335W GPA1P08539 472 aa5.05□□□□□ -1.6
NUP2YLR335W RRP1P35178 278 aaPredicted RBP5.05□□□□□ -1.6
NUP2YLR335W RAD26P40352 1085 aa5.05□□□□□ -1.6
NUP2YLR335W SSL2Q00578 843 aa5.05□□□□□ -1.6
NUP2YLR335W COG4Q06096 861 aa5.05□□□□□ -1.6
NUP2YLR335W SSP2Q08646 371 aa5.05□□□□□ -1.6
NUP2YLR335W STE11P23561 717 aa5.05□□□□□ -1.6
NUP2YLR335W GSY2P27472 705 aa5.05□□□□□ -1.6
NUP2YLR335W DEP1P31385 405 aa5.05□□□□□ -1.6
NUP2YLR335W MNR2P35724 969 aa5.05□□□□□ -1.6
NUP2YLR335W BUD6P41697 788 aa5.05□□□□□ -1.6
NUP2YLR335W ZDS2P54786 942 aa5.05□□□□□ -1.6
NUP2YLR335W RMT2Q03305 412 aa5.05□□□□□ -1.6
NUP2YLR335W GIN4Q12263 1142 aa5.05□□□□□ -1.6
NUP2YLR335W PRP45P28004 379 aaPredicted RBP5.04□□□□□ -1.6
NUP2YLR335W FBP26P32604 452 aa5.04□□□□□ -1.6
NUP2YLR335W RFC5P38251 354 aa5.04□□□□□ -1.6
NUP2YLR335W YER130CP39959 443 aa5.04□□□□□ -1.6
NUP2YLR335W CTH1P47976 325 aa5.04□□□□□ -1.6
NUP2YLR335W CST9Q06032 482 aa5.04□□□□□ -1.6
NUP2YLR335W BCH2P36122 765 aa5.04□□□□□ -1.6
NUP2YLR335W KTR3P38130 404 aaPredicted RBP5.04□□□□□ -1.6
NUP2YLR335W MSB3P48566 633 aaPredicted RBP5.04□□□□□ -1.6
NUP2YLR335W MRS2Q01926 470 aa5.04□□□□□ -1.6
NUP2YLR335W YLR407WQ06070 228 aa5.04□□□□□ -1.6
NUP2YLR335W MSB4Q12317 492 aa5.04□□□□□ -1.6
NUP2YLR335W GYP5Q12344 894 aa5.04□□□□□ -1.6
NUP2YLR335W RSF2P46974 1380 aa5.03□□□□□ -1.6
NUP2YLR335W OSM1P21375 501 aaKnown RBP5.03□□□□□ -1.6
NUP2YLR335W PEP3P27801 918 aa5.03□□□□□ -1.6
NUP2YLR335W SSF2Q12153 453 aaPredicted RBP5.03□□□□□ -1.6
NUP2YLR335W MPH3P0CE00 602 aa5.02□□□□□ -1.61
NUP2YLR335W CLB1P24868 471 aa5.02□□□□□ -1.61
NUP2YLR335W YEL043WP32618 956 aa5.02□□□□□ -1.61
NUP2YLR335W CIC1P38779 376 aaKnown RBP5.02□□□□□ -1.61
NUP2YLR335W VID28P40547 921 aa5.02□□□□□ -1.61
NUP2YLR335W MAL13P53338 473 aa5.02□□□□□ -1.61
NUP2YLR335W VPS75P53853 264 aa5.02□□□□□ -1.61
NUP2YLR335W ECM23Q02710 187 aa5.02□□□□□ -1.61
NUP2YLR335W WAR1Q03631 944 aa5.02□□□□□ -1.61
NUP2YLR335W VPS64Q03944 604 aa5.02□□□□□ -1.61
NUP2YLR335W PSH1Q12161 406 aa5.02□□□□□ -1.61
NUP2YLR335W CBP3P21560 335 aa5.02□□□□□ -1.61
NUP2YLR335W DPB3P27344 201 aa5.02□□□□□ -1.61
NUP2YLR335W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
NUP2YLR335W ALF1P53904 254 aa5.02□□□□□ -1.61
NUP2YLR335W UTP13Q05946 817 aaKnown RBP5.02□□□□□ -1.61
NUP2YLR335W EPS1P40557 701 aa5.01□□□□□ -1.61
NUP2YLR335W ESF1Q06344 628 aaKnown RBP5.01□□□□□ -1.61
NUP2YLR335W SNU66Q12420 587 aaPredicted RBP5.01□□□□□ -1.61
NUP2YLR335W MSH1P25846 959 aa5.01□□□□□ -1.61
NUP2YLR335W SRP40P32583 406 aaPredicted RBP5.01□□□□□ -1.61
NUP2YLR335W CAJ1P39101 391 aa5.01□□□□□ -1.61
NUP2YLR335W NOC2P39744 710 aaKnown RBP5.01□□□□□ -1.61
NUP2YLR335W THI12P42883 340 aa5.01□□□□□ -1.61
NUP2YLR335W THI5P43534 340 aa5.01□□□□□ -1.61
NUP2YLR335W ENT3P47160 408 aa5.01□□□□□ -1.61
NUP2YLR335W THI11P47183 340 aa5.01□□□□□ -1.61
NUP2YLR335W ENP2P48234 707 aaKnown RBP5.01□□□□□ -1.61
NUP2YLR335W PRP31P49704 494 aaPredicted RBP5.01□□□□□ -1.61
NUP2YLR335W YBP2P53169 641 aa5.01□□□□□ -1.61
NUP2YLR335W ATG13Q06628 738 aa5.01□□□□□ -1.61
NUP2YLR335W THI13Q07748 340 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms