RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C AI1P03875 834 aa6.5□□□□□ -1.37
ATG38YLR211C VMA3P25515 160 aa6.5□□□□□ -1.37
ATG38YLR211C THI72Q08579 599 aa6.5□□□□□ -1.37
ATG38YLR211C ISC10P32645 267 aa6.49□□□□□ -1.37
ATG38YLR211C ICP55P40051 511 aa6.49□□□□□ -1.37
ATG38YLR211C SRS2P12954 1174 aa6.48□□□□□ -1.37
ATG38YLR211C PDC5P16467 563 aaKnown RBP6.48□□□□□ -1.37
ATG38YLR211C NSG2P53898 299 aa6.48□□□□□ -1.37
ATG38YLR211C KNS1P32350 737 aaPredicted RBP6.46□□□□□ -1.38
ATG38YLR211C BOI1P38041 980 aaKnown RBP6.46□□□□□ -1.38
ATG38YLR211C PRK1P40494 810 aa6.46□□□□□ -1.38
ATG38YLR211C KTR2P33550 425 aa6.45□□□□□ -1.38
ATG38YLR211C ITC1P53125 1264 aa6.45□□□□□ -1.38
ATG38YLR211C PNP1Q05788 311 aa6.45□□□□□ -1.38
ATG38YLR211C PHM7Q12252 991 aa6.45□□□□□ -1.38
ATG38YLR211C BSD2P38356 321 aa6.44□□□□□ -1.38
ATG38YLR211C APM2P38700 605 aa6.44□□□□□ -1.38
ATG38YLR211C HEH2Q03281 663 aa6.44□□□□□ -1.38
ATG38YLR211C TDA6Q06466 467 aa6.44□□□□□ -1.38
ATG38YLR211C RPP1AP05318 106 aaPredicted RBP6.43□□□□□ -1.38
ATG38YLR211C NCL1P38205 684 aaKnown RBP6.43□□□□□ -1.38
ATG38YLR211C YOR296WQ08748 1289 aa6.43□□□□□ -1.38
ATG38YLR211C MRP10O75012 95 aa6.42□□□□□ -1.38
ATG38YLR211C DYS1P38791 387 aa6.42□□□□□ -1.38
ATG38YLR211C MTC5Q03897 1148 aa6.42□□□□□ -1.38
ATG38YLR211C IDI1P15496 288 aa6.41□□□□□ -1.38
ATG38YLR211C LDH1P38139 375 aa6.41□□□□□ -1.38
ATG38YLR211C BOL3P39724 118 aa6.41□□□□□ -1.38
ATG38YLR211C PUS1Q12211 544 aaKnown RBP6.41□□□□□ -1.38
ATG38YLR211C MSN1P22148 382 aa6.4□□□□□ -1.38
ATG38YLR211C APC11Q12157 165 aa6.4□□□□□ -1.38
ATG38YLR211C GIP1P38229 639 aa6.39□□□□□ -1.39
ATG38YLR211C MCX1P38323 520 aaPredicted RBP6.39□□□□□ -1.39
ATG38YLR211C YNR014WP53719 212 aa6.39□□□□□ -1.39
ATG38YLR211C LSO1Q3E827 93 aa6.39□□□□□ -1.39
ATG38YLR211C RPB10P22139 70 aa6.38□□□□□ -1.39
ATG38YLR211C BOI2P39969 1040 aa6.38□□□□□ -1.39
ATG38YLR211C YCK2P23292 546 aaKnown RBP6.37□□□□□ -1.39
ATG38YLR211C YER156CP40093 338 aaKnown RBP6.37□□□□□ -1.39
ATG38YLR211C NAR1P23503 491 aaKnown RBP6.36□□□□□ -1.39
ATG38YLR211C SKN7P38889 622 aa6.36□□□□□ -1.39
ATG38YLR211C YPR053CQ6Q5F3 151 aa6.36□□□□□ -1.39
ATG38YLR211C RRN6P32786 894 aa6.35□□□□□ -1.39
ATG38YLR211C PGM2P37012 569 aaKnown RBP6.35□□□□□ -1.39
ATG38YLR211C ISW1P38144 1129 aa6.35□□□□□ -1.39
ATG38YLR211C YIL165CP40446 119 aa6.35□□□□□ -1.39
ATG38YLR211C HXT8P40886 569 aa6.35□□□□□ -1.39
ATG38YLR211C RGD2P43556 714 aa6.35□□□□□ -1.39
ATG38YLR211C LSB3P43603 459 aaKnown RBP6.35□□□□□ -1.39
ATG38YLR211C SUT1P53032 299 aaKnown RBP6.35□□□□□ -1.39
ATG38YLR211C GIS4Q04233 774 aa6.35□□□□□ -1.39
ATG38YLR211C YDR215CQ12240 137 aa6.35□□□□□ -1.39
ATG38YLR211C MET1P36150 593 aa6.34□□□□□ -1.39
ATG38YLR211C SLN1P39928 1220 aaPredicted RBP6.34□□□□□ -1.39
ATG38YLR211C CCT8P47079 568 aaKnown RBP6.34□□□□□ -1.39
ATG38YLR211C YMR187CQ03236 431 aa6.34□□□□□ -1.39
ATG38YLR211C EMG1Q06287 252 aaKnown RBP6.34□□□□□ -1.39
ATG38YLR211C SSA1P10591 642 aaKnown RBP6.33□□□□□ -1.4
ATG38YLR211C ALG14P38242 237 aa6.33□□□□□ -1.4
ATG38YLR211C FUR4P05316 633 aaKnown RBP6.32□□□□□ -1.4
ATG38YLR211C RPL34AP87262 121 aaPredicted RBP6.31□□□□□ -1.4
ATG38YLR211C NHA1Q99271 985 aa6.31□□□□□ -1.4
ATG38YLR211C PRY1P47032 299 aa6.3□□□□□ -1.4
ATG38YLR211C PPT1P53043 513 aa6.3□□□□□ -1.4
ATG38YLR211C NTA1P40354 457 aa6.29□□□□□ -1.4
ATG38YLR211C KAR5Q04746 504 aa6.29□□□□□ -1.4
ATG38YLR211C TIF6Q12522 245 aaKnown RBP6.29□□□□□ -1.4
ATG38YLR211C YJL181WP46987 611 aa6.28□□□□□ -1.4
ATG38YLR211C MCA1Q08601 432 aa6.28□□□□□ -1.4
ATG38YLR211C TFA2P36145 328 aa6.27□□□□□ -1.41
ATG38YLR211C GLO3P38682 493 aaKnown RBP6.27□□□□□ -1.41
ATG38YLR211C AIM46P38885 310 aa6.27□□□□□ -1.41
ATG38YLR211C RAD55P38953 406 aa6.27□□□□□ -1.41
ATG38YLR211C FIR1P40020 876 aa6.27□□□□□ -1.41
ATG38YLR211C QDR1P40475 563 aa6.27□□□□□ -1.41
ATG38YLR211C BUD9P53226 547 aa6.27□□□□□ -1.41
ATG38YLR211C GAS5Q08193 484 aa6.27□□□□□ -1.41
ATG38YLR211C TRL1P09880 827 aaKnown RBP6.26□□□□□ -1.41
ATG38YLR211C GEF1P37020 779 aa6.26□□□□□ -1.41
ATG38YLR211C PSY2P40164 858 aa6.25□□□□□ -1.41
ATG38YLR211C INP51P40559 946 aaKnown RBP6.25□□□□□ -1.41
ATG38YLR211C ATG1P53104 897 aa6.25□□□□□ -1.41
ATG38YLR211C ALD3P54114 506 aa6.25□□□□□ -1.41
ATG38YLR211C RSC2Q06488 889 aa6.25□□□□□ -1.41
ATG38YLR211C CDC3P32457 520 aaKnown RBP6.24□□□□□ -1.41
ATG38YLR211C SMC1P32908 1225 aa6.24□□□□□ -1.41
ATG38YLR211C IRS4P36115 615 aaKnown RBP6.24□□□□□ -1.41
ATG38YLR211C TED1P40533 473 aa6.24□□□□□ -1.41
ATG38YLR211C SOK2P53438 785 aaPredicted RBP6.24□□□□□ -1.41
ATG38YLR211C BIO5P53744 561 aaKnown RBP6.24□□□□□ -1.41
ATG38YLR211C AMN1P38285 549 aaPredicted RBP6.23□□□□□ -1.41
ATG38YLR211C RRM3P38766 723 aa6.23□□□□□ -1.41
ATG38YLR211C GIP2P40036 548 aa6.23□□□□□ -1.41
ATG38YLR211C TY4B-PA0A0B7P3V8 1104 aa6.22□□□□□ -1.41
ATG38YLR211C ERP5P38819 212 aa6.22□□□□□ -1.41
ATG38YLR211C CTR9P89105 1077 aa6.22□□□□□ -1.41
ATG38YLR211C MNL2Q12205 849 aa6.22□□□□□ -1.41
ATG38YLR211C TY4A-HQ6Q5P6 413 aa6.22□□□□□ -1.41
ATG38YLR211C TAT1P38085 619 aa6.21□□□□□ -1.42
ATG38YLR211C YBR287WP38355 427 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms