RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C PRP45P28004 379 aaPredicted RBP4.59□□□□□ -1.67
SHQ1YIL104C LEU2P04173 364 aaPredicted RBP4.58□□□□□ -1.68
SHQ1YIL104C SPB4P25808 606 aaPredicted RBP4.58□□□□□ -1.68
SHQ1YIL104C PUS1Q12211 544 aaKnown RBP4.58□□□□□ -1.68
SHQ1YIL104C DPH6Q12429 685 aa4.58□□□□□ -1.68
SHQ1YIL104C SCJ1P25303 377 aa4.57□□□□□ -1.68
SHQ1YIL104C VAC17P25591 423 aa4.57□□□□□ -1.68
SHQ1YIL104C YBL086CP38177 466 aa4.57□□□□□ -1.68
SHQ1YIL104C MMP1Q12372 583 aa4.57□□□□□ -1.68
SHQ1YIL104C YJR098CP47139 656 aa4.56□□□□□ -1.68
SHQ1YIL104C YEF3P16521 1044 aaKnown RBP4.56□□□□□ -1.68
SHQ1YIL104C CSE4P36012 229 aa4.56□□□□□ -1.68
SHQ1YIL104C SLM3Q12093 417 aa4.56□□□□□ -1.68
SHQ1YIL104C TCB1Q12466 1186 aa4.56□□□□□ -1.68
SHQ1YIL104C POL5P39985 1022 aaKnown RBP4.55□□□□□ -1.68
SHQ1YIL104C ROG3P43602 733 aa4.55□□□□□ -1.68
SHQ1YIL104C MTR4P47047 1073 aaKnown RBP4.55□□□□□ -1.68
SHQ1YIL104C HIM1Q06674 414 aa4.55□□□□□ -1.68
SHQ1YIL104C AUS1Q08409 1394 aa4.54□□□□□ -1.68
SHQ1YIL104C DLD1P32891 587 aa4.54□□□□□ -1.68
SHQ1YIL104C OSH7P38755 437 aa4.54□□□□□ -1.68
SHQ1YIL104C LYS5P50113 272 aa4.54□□□□□ -1.68
SHQ1YIL104C TY1A-MR1Q04215 440 aa4.54□□□□□ -1.68
SHQ1YIL104C PDS5Q04264 1277 aa4.54□□□□□ -1.68
SHQ1YIL104C IMH1Q06704 911 aaKnown RBP4.54□□□□□ -1.68
SHQ1YIL104C PHM7Q12252 991 aa4.54□□□□□ -1.68
SHQ1YIL104C DOT5P40553 215 aa4.53□□□□□ -1.68
SHQ1YIL104C LSB3P43603 459 aaKnown RBP4.53□□□□□ -1.68
SHQ1YIL104C EMW1P42842 904 aaKnown RBP4.52□□□□□ -1.69
SHQ1YIL104C YMR074CQ04773 145 aa4.52□□□□□ -1.69
SHQ1YIL104C GAS4Q08271 471 aa4.52□□□□□ -1.69
SHQ1YIL104C MHP1P43638 1398 aa4.51□□□□□ -1.69
SHQ1YIL104C ESS1P22696 170 aa4.51□□□□□ -1.69
SHQ1YIL104C DMA1P38823 416 aa4.51□□□□□ -1.69
SHQ1YIL104C ATF2P53296 535 aa4.51□□□□□ -1.69
SHQ1YIL104C FOX2Q02207 900 aaKnown RBP4.51□□□□□ -1.69
SHQ1YIL104C YRF1-2P40105 1681 aa4.51□□□□□ -1.69
SHQ1YIL104C RRP5Q05022 1729 aaKnown RBP4.5□□□□□ -1.69
SHQ1YIL104C NPR2P39923 615 aa4.5□□□□□ -1.69
SHQ1YIL104C XKS1P42826 600 aa4.5□□□□□ -1.69
SHQ1YIL104C RRP46P53256 223 aaPredicted RBP4.5□□□□□ -1.69
SHQ1YIL104C TAP42Q04372 366 aa4.5□□□□□ -1.69
SHQ1YIL104C CCP1P00431 361 aa4.49□□□□□ -1.69
SHQ1YIL104C MKS1P34072 584 aa4.48□□□□□ -1.69
SHQ1YIL104C JJJ3P47138 172 aa4.48□□□□□ -1.69
SHQ1YIL104C RSF2P46974 1380 aa4.48□□□□□ -1.69
SHQ1YIL104C YJU3P28321 313 aa4.47□□□□□ -1.69
SHQ1YIL104C YKR075CP36155 307 aa4.47□□□□□ -1.69
SHQ1YIL104C RPN11P43588 306 aaKnown RBP4.47□□□□□ -1.69
SHQ1YIL104C TY4B-HP0C2J7 1802 aa4.47□□□□□ -1.69
SHQ1YIL104C TY4B-JP47024 1803 aa4.47□□□□□ -1.69
SHQ1YIL104C COBP00163 385 aa4.46□□□□□ -1.69
SHQ1YIL104C PDI1P17967 522 aaKnown RBP4.46□□□□□ -1.69
SHQ1YIL104C RSC30P38781 883 aa4.46□□□□□ -1.69
SHQ1YIL104C LYS4P49367 693 aaPredicted RBP4.46□□□□□ -1.69
SHQ1YIL104C ADE16P54113 591 aaKnown RBP4.46□□□□□ -1.69
SHQ1YIL104C DFG5Q05031 458 aa4.46□□□□□ -1.69
SHQ1YIL104C SPT7P35177 1332 aa4.46□□□□□ -1.7
SHQ1YIL104C MDJ1P35191 511 aa4.46□□□□□ -1.7
SHQ1YIL104C YKL133CP36066 463 aa4.46□□□□□ -1.7
SHQ1YIL104C NSG2P53898 299 aa4.46□□□□□ -1.7
SHQ1YIL104C BDS1Q08347 646 aa4.46□□□□□ -1.7
SHQ1YIL104C CTH1P47976 325 aa4.45□□□□□ -1.7
SHQ1YIL104C YIL177CP40434 1758 aa4.44□□□□□ -1.7
SHQ1YIL104C YJL225CP40889 1758 aa4.44□□□□□ -1.7
SHQ1YIL104C SEC3P33332 1336 aaKnown RBP4.44□□□□□ -1.7
SHQ1YIL104C CDC19P00549 500 aaKnown RBP4.44□□□□□ -1.7
SHQ1YIL104C GRX4P32642 244 aa4.44□□□□□ -1.7
SHQ1YIL104C DSD1P53095 428 aa4.44□□□□□ -1.7
SHQ1YIL104C INP54Q08227 384 aaKnown RBP4.44□□□□□ -1.7
SHQ1YIL104C YRF1-4O13559 1382 aa4.43□□□□□ -1.7
SHQ1YIL104C AI1P03875 834 aa4.43□□□□□ -1.7
SHQ1YIL104C LEU3P08638 886 aa4.43□□□□□ -1.7
SHQ1YIL104C ARG8P18544 423 aa4.43□□□□□ -1.7
SHQ1YIL104C OSM1P21375 501 aaKnown RBP4.43□□□□□ -1.7
SHQ1YIL104C FIG4P42837 879 aa4.43□□□□□ -1.7
SHQ1YIL104C PKH3Q03306 898 aaPredicted RBP4.43□□□□□ -1.7
SHQ1YIL104C RPO41P13433 1351 aaKnown RBP4.43□□□□□ -1.7
SHQ1YIL104C SCT1P32784 759 aa4.42□□□□□ -1.7
SHQ1YIL104C VTC4P47075 721 aa4.42□□□□□ -1.7
SHQ1YIL104C NAM8Q00539 523 aaKnown RBP4.42□□□□□ -1.7
SHQ1YIL104C THI72Q08579 599 aa4.42□□□□□ -1.7
SHQ1YIL104C SIR4P11978 1358 aa4.42□□□□□ -1.7
SHQ1YIL104C ROM2P51862 1356 aaKnown RBP4.42□□□□□ -1.7
SHQ1YIL104C YRF1-3P0CX14 1859 aa4.42□□□□□ -1.7
SHQ1YIL104C YRF1-7P0CX15 1859 aa4.42□□□□□ -1.7
SHQ1YIL104C YRF1-6P53819 1859 aa4.42□□□□□ -1.7
SHQ1YIL104C FBP26P32604 452 aa4.41□□□□□ -1.7
SHQ1YIL104C AKL1P38080 1108 aaKnown RBP4.41□□□□□ -1.7
SHQ1YIL104C NRD1P53617 575 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SHQ1YIL104C YNR021WP53723 404 aaKnown RBP4.41□□□□□ -1.7
SHQ1YIL104C NUP145P49687 1317 aa4.41□□□□□ -1.7
SHQ1YIL104C URB1P34241 1764 aaKnown RBP4.41□□□□□ -1.7
SHQ1YIL104C KAR2P16474 682 aaKnown RBP4.41□□□□□ -1.7
SHQ1YIL104C NTH2P35172 780 aa4.41□□□□□ -1.7
SHQ1YIL104C STE6P12866 1290 aa4.4□□□□□ -1.71
SHQ1YIL104C TEC1P18412 486 aa4.4□□□□□ -1.71
SHQ1YIL104C CEM1P39525 442 aa4.4□□□□□ -1.71
SHQ1YIL104C HSP104P31539 908 aaKnown RBP4.39□□□□□ -1.71
SHQ1YIL104C ENP1P38333 483 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms