RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C RAD3P06839 778 aa6.46□□□□□ -1.38
SFB3YHR098C MBR1P23493 339 aa6.46□□□□□ -1.38
SFB3YHR098C CBF5P33322 483 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
SFB3YHR098C SLD2P34252 453 aa6.46□□□□□ -1.38
SFB3YHR098C CST6P40535 587 aa6.46□□□□□ -1.38
SFB3YHR098C HOT1Q03213 719 aa6.46□□□□□ -1.38
SFB3YHR098C BNR1P40450 1375 aa6.45□□□□□ -1.38
SFB3YHR098C SPO1P53541 631 aa6.45□□□□□ -1.38
SFB3YHR098C TAF13P11747 167 aa6.45□□□□□ -1.38
SFB3YHR098C PUP2P32379 260 aa6.45□□□□□ -1.38
SFB3YHR098C CCT5P40413 562 aaKnown RBP6.45□□□□□ -1.38
SFB3YHR098C YNL050CP53952 270 aa6.45□□□□□ -1.38
SFB3YHR098C PDR1P12383 1068 aa6.44□□□□□ -1.38
SFB3YHR098C BIO2P32451 375 aa6.44□□□□□ -1.38
SFB3YHR098C OSW7P43611 510 aa6.44□□□□□ -1.38
SFB3YHR098C YJL007CP47080 104 aa6.44□□□□□ -1.38
SFB3YHR098C PET111P08468 800 aa6.44□□□□□ -1.38
SFB3YHR098C ISW1P38144 1129 aa6.44□□□□□ -1.38
SFB3YHR098C RGD1P38339 666 aa6.44□□□□□ -1.38
SFB3YHR098C SAP1P39955 897 aaKnown RBP6.44□□□□□ -1.38
SFB3YHR098C YAF9P53930 226 aa6.44□□□□□ -1.38
SFB3YHR098C YDR090CQ03193 310 aa6.44□□□□□ -1.38
SFB3YHR098C RRB1Q04225 511 aaKnown RBP6.44□□□□□ -1.38
SFB3YHR098C COX6P00427 148 aa6.43□□□□□ -1.38
SFB3YHR098C VPS30Q02948 557 aa6.43□□□□□ -1.38
SFB3YHR098C SGD1Q06132 899 aa6.43□□□□□ -1.38
SFB3YHR098C YNG2P38806 282 aaKnown RBP6.43□□□□□ -1.38
SFB3YHR098C STB3Q12427 513 aa6.43□□□□□ -1.38
SFB3YHR098C HOP09932 586 aa6.42□□□□□ -1.38
SFB3YHR098C RFC5P38251 354 aa6.42□□□□□ -1.38
SFB3YHR098C CTK3P46963 296 aaPredicted RBP6.42□□□□□ -1.38
SFB3YHR098C RTS3P53289 263 aa6.42□□□□□ -1.38
SFB3YHR098C AOS1Q06624 347 aa6.42□□□□□ -1.38
SFB3YHR098C HIM1Q06674 414 aa6.42□□□□□ -1.38
SFB3YHR098C SSA4P22202 642 aaKnown RBP6.42□□□□□ -1.38
SFB3YHR098C ZUO1P32527 433 aaKnown RBP6.42□□□□□ -1.38
SFB3YHR098C EDS1P38073 919 aa6.42□□□□□ -1.38
SFB3YHR098C PET123P17558 318 aa6.41□□□□□ -1.38
SFB3YHR098C ELM1P32801 640 aa6.41□□□□□ -1.38
SFB3YHR098C NUP188P52593 1655 aaKnown RBP6.41□□□□□ -1.38
SFB3YHR098C RLP24Q07915 199 aaKnown RBP6.41□□□□□ -1.38
SFB3YHR098C VAS1P07806 1104 aaKnown RBP6.4□□□□□ -1.38
SFB3YHR098C COQ8P27697 501 aa6.4□□□□□ -1.38
SFB3YHR098C CDC3P32457 520 aaKnown RBP6.4□□□□□ -1.38
SFB3YHR098C DPH5P32469 300 aaPredicted RBP6.4□□□□□ -1.38
SFB3YHR098C RIO2P40160 425 aaKnown RBP6.4□□□□□ -1.38
SFB3YHR098C DNM1P54861 757 aa6.4□□□□□ -1.38
SFB3YHR098C CSI1Q04368 295 aa6.4□□□□□ -1.38
SFB3YHR098C ERV41Q04651 352 aa6.4□□□□□ -1.38
SFB3YHR098C SLP1Q12232 587 aa6.4□□□□□ -1.38
SFB3YHR098C SEC14P24280 304 aaKnown RBP6.4□□□□□ -1.38
SFB3YHR098C OLA1P38219 394 aaKnown RBP6.4□□□□□ -1.38
SFB3YHR098C PMC1P38929 1173 aaPredicted RBP6.4□□□□□ -1.38
SFB3YHR098C FYV10P40492 516 aa6.4□□□□□ -1.38
SFB3YHR098C REF2P42073 533 aaPredicted RBP6.4□□□□□ -1.38
SFB3YHR098C WHI5Q12416 295 aa6.4□□□□□ -1.38
SFB3YHR098C PRX1P34227 261 aaKnown RBP6.4□□□□□ -1.39
SFB3YHR098C PCH2P38126 564 aa6.39□□□□□ -1.39
SFB3YHR098C VPS29P38759 282 aa6.39□□□□□ -1.39
SFB3YHR098C PXR1P53335 271 aaPredicted RBP6.39□□□□□ -1.39
SFB3YHR098C VMS1Q04311 632 aaKnown RBP6.39□□□□□ -1.39
SFB3YHR098C HAT1Q12341 374 aa6.39□□□□□ -1.39
SFB3YHR098C SEC7P11075 2009 aaKnown RBP6.39□□□□□ -1.39
SFB3YHR098C RPL19AP0CX82 189 aaKnown RBP6.39□□□□□ -1.39
SFB3YHR098C RPL19BP0CX83 189 aaPredicted RBP6.39□□□□□ -1.39
SFB3YHR098C RRP14P36080 434 aaKnown RBP6.39□□□□□ -1.39
SFB3YHR098C TPS3P38426 1054 aaKnown RBP6.39□□□□□ -1.39
SFB3YHR098C HGH1P48362 394 aaKnown RBP6.39□□□□□ -1.39
SFB3YHR098C RIA1P53893 1110 aa6.39□□□□□ -1.39
SFB3YHR098C SVL3Q03088 825 aaKnown RBP6.39□□□□□ -1.39
SFB3YHR098C BCK1Q01389 1478 aa6.38□□□□□ -1.39
SFB3YHR098C IOC3P43596 787 aa6.38□□□□□ -1.39
SFB3YHR098C RBA50Q04418 439 aa6.38□□□□□ -1.39
SFB3YHR098C YDR338CQ05497 695 aa6.38□□□□□ -1.39
SFB3YHR098C YSH1Q06224 779 aaPredicted RBP6.38□□□□□ -1.39
SFB3YHR098C MCM16Q12262 181 aa6.38□□□□□ -1.39
SFB3YHR098C YJR142WP47173 342 aa6.38□□□□□ -1.39
SFB3YHR098C OMS1Q06668 471 aa6.38□□□□□ -1.39
SFB3YHR098C APL4Q12028 832 aa6.38□□□□□ -1.39
SFB3YHR098C YRF1-1P0CX20 1796 aa6.37□□□□□ -1.39
SFB3YHR098C YRF1-5P0CX21 1796 aa6.37□□□□□ -1.39
SFB3YHR098C YRF1-8P0CX22 1796 aa6.37□□□□□ -1.39
SFB3YHR098C CDC16P09798 840 aa6.37□□□□□ -1.39
SFB3YHR098C HEL1P36113 551 aa6.37□□□□□ -1.39
SFB3YHR098C SFH1Q06168 426 aa6.37□□□□□ -1.39
SFB3YHR098C MRM1P25270 412 aa6.37□□□□□ -1.39
SFB3YHR098C YME2P32843 850 aa6.37□□□□□ -1.39
SFB3YHR098C BCH2P36122 765 aa6.37□□□□□ -1.39
SFB3YHR098C SEC26P41810 973 aaKnown RBP6.37□□□□□ -1.39
SFB3YHR098C RSC8P43609 557 aaKnown RBP6.37□□□□□ -1.39
SFB3YHR098C ENT3P47160 408 aa6.37□□□□□ -1.39
SFB3YHR098C YGL242CP53066 181 aa6.37□□□□□ -1.39
SFB3YHR098C WAR1Q03631 944 aa6.37□□□□□ -1.39
SFB3YHR098C SDH5Q08230 162 aa6.37□□□□□ -1.39
SFB3YHR098C TSR3Q12094 313 aaKnown RBP6.37□□□□□ -1.39
SFB3YHR098C STE11P23561 717 aa6.36□□□□□ -1.39
SFB3YHR098C CDC60P26637 1090 aaKnown RBP6.36□□□□□ -1.39
SFB3YHR098C ECM32P32644 1121 aaKnown RBP6.36□□□□□ -1.39
SFB3YHR098C NDC80P40460 691 aa6.36□□□□□ -1.39
SFB3YHR098C ZDS1P50111 915 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms