RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C MDJ2P42834 146 aa6.4□□□□□ -1.38
RTA1YGR213C SKP1P52286 194 aa6.4□□□□□ -1.38
RTA1YGR213C CUZ1P53899 274 aa6.4□□□□□ -1.38
RTA1YGR213C DIT1P21623 536 aa6.39□□□□□ -1.39
RTA1YGR213C RPB10P22139 70 aa6.39□□□□□ -1.39
RTA1YGR213C GRS1P38088 690 aaKnown RBP6.39□□□□□ -1.39
RTA1YGR213C STB3Q12427 513 aa6.39□□□□□ -1.39
RTA1YGR213C GBP2P25555 427 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
RTA1YGR213C SPR3P41901 512 aa6.38□□□□□ -1.39
RTA1YGR213C YMR265CQ03508 461 aaKnown RBP6.38□□□□□ -1.39
RTA1YGR213C HXT8P40886 569 aa6.37□□□□□ -1.39
RTA1YGR213C SUT1P53032 299 aaKnown RBP6.37□□□□□ -1.39
RTA1YGR213C CUS1Q02554 436 aaPredicted RBP6.37□□□□□ -1.39
RTA1YGR213C MSN1P22148 382 aa6.36□□□□□ -1.39
RTA1YGR213C YOR296WQ08748 1289 aa6.36□□□□□ -1.39
RTA1YGR213C YDR461C-AQ2V2P7 80 aa6.36□□□□□ -1.39
RTA1YGR213C RPP1AP05318 106 aaPredicted RBP6.35□□□□□ -1.39
RTA1YGR213C NAB2P32505 525 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
RTA1YGR213C STM1P39015 273 aaKnown RBP6.35□□□□□ -1.39
RTA1YGR213C KRE33P53914 1056 aaKnown RBP6.35□□□□□ -1.39
RTA1YGR213C SMC1P32908 1225 aa6.34□□□□□ -1.39
RTA1YGR213C ISW1P38144 1129 aa6.34□□□□□ -1.39
RTA1YGR213C GIP1P38229 639 aa6.34□□□□□ -1.39
RTA1YGR213C BSD2P38356 321 aa6.34□□□□□ -1.39
RTA1YGR213C APM2P38700 605 aa6.34□□□□□ -1.39
RTA1YGR213C UFD2P54860 961 aa6.34□□□□□ -1.39
RTA1YGR213C SEN54Q02825 467 aaPredicted RBP6.34□□□□□ -1.39
RTA1YGR213C SYT1Q06836 1226 aa6.34□□□□□ -1.39
RTA1YGR213C SLD2P34252 453 aa6.33□□□□□ -1.4
RTA1YGR213C YHL050CP38721 697 aa6.33□□□□□ -1.4
RTA1YGR213C YHR219WP38900 624 aa6.33□□□□□ -1.4
RTA1YGR213C CEM1P39525 442 aa6.33□□□□□ -1.4
RTA1YGR213C TRS120Q04183 1289 aa6.33□□□□□ -1.4
RTA1YGR213C NUT2Q06213 157 aa6.33□□□□□ -1.4
RTA1YGR213C FIR1P40020 876 aa6.32□□□□□ -1.4
RTA1YGR213C NTA1P40354 457 aa6.32□□□□□ -1.4
RTA1YGR213C RGD2P43556 714 aa6.32□□□□□ -1.4
RTA1YGR213C LYS5P50113 272 aa6.32□□□□□ -1.4
RTA1YGR213C ITC1P53125 1264 aa6.32□□□□□ -1.4
RTA1YGR213C YNR040WP53736 256 aa6.32□□□□□ -1.4
RTA1YGR213C ADE12P80210 433 aaKnown RBP6.32□□□□□ -1.4
RTA1YGR213C FRT1Q99332 602 aa6.32□□□□□ -1.4
RTA1YGR213C FPS1P23900 669 aa6.31□□□□□ -1.4
RTA1YGR213C NCL1P38205 684 aaKnown RBP6.31□□□□□ -1.4
RTA1YGR213C MSC7P38694 644 aa6.31□□□□□ -1.4
RTA1YGR213C RAD55P38953 406 aa6.31□□□□□ -1.4
RTA1YGR213C HEH2Q03281 663 aa6.31□□□□□ -1.4
RTA1YGR213C MSC6Q08818 692 aaKnown RBP6.31□□□□□ -1.4
RTA1YGR213C MNL2Q12205 849 aa6.31□□□□□ -1.4
RTA1YGR213C YBR287WP38355 427 aa6.3□□□□□ -1.4
RTA1YGR213C SEC20P28791 383 aa6.29□□□□□ -1.4
RTA1YGR213C PPX1P38698 397 aa6.29□□□□□ -1.4
RTA1YGR213C YPL062WQ02781 134 aa6.29□□□□□ -1.4
RTA1YGR213C TY1A-DR2Q03964 440 aaKnown RBP6.29□□□□□ -1.4
RTA1YGR213C HPF1Q05164 967 aa6.29□□□□□ -1.4
RTA1YGR213C IRS4P36115 615 aaKnown RBP6.28□□□□□ -1.4
RTA1YGR213C YIL165CP40446 119 aa6.28□□□□□ -1.4
RTA1YGR213C JJJ3P47138 172 aa6.28□□□□□ -1.4
RTA1YGR213C RSC4Q02206 625 aa6.28□□□□□ -1.4
RTA1YGR213C EMG1Q06287 252 aaKnown RBP6.28□□□□□ -1.4
RTA1YGR213C DPH6Q12429 685 aa6.28□□□□□ -1.4
RTA1YGR213C TIF6Q12522 245 aaKnown RBP6.28□□□□□ -1.4
RTA1YGR213C IPL1P38991 367 aa6.27□□□□□ -1.41
RTA1YGR213C YER156CP40093 338 aaKnown RBP6.27□□□□□ -1.41
RTA1YGR213C PSY2P40164 858 aa6.27□□□□□ -1.41
RTA1YGR213C YGR035CP53222 116 aa6.27□□□□□ -1.41
RTA1YGR213C GPI13Q07830 1017 aa6.27□□□□□ -1.41
RTA1YGR213C AIM46P38885 310 aa6.26□□□□□ -1.41
RTA1YGR213C YNL011CP53980 444 aa6.26□□□□□ -1.41
RTA1YGR213C IDI1P15496 288 aa6.25□□□□□ -1.41
RTA1YGR213C CDC55Q00362 526 aa6.25□□□□□ -1.41
RTA1YGR213C WHI5Q12416 295 aa6.25□□□□□ -1.41
RTA1YGR213C PRK1P40494 810 aa6.24□□□□□ -1.41
RTA1YGR213C GPM1P00950 247 aaKnown RBP6.23□□□□□ -1.41
RTA1YGR213C HEM3P28789 327 aa6.22□□□□□ -1.41
RTA1YGR213C MET4P32389 672 aa6.22□□□□□ -1.41
RTA1YGR213C RSC2Q06488 889 aa6.22□□□□□ -1.41
RTA1YGR213C PDC5P16467 563 aaKnown RBP6.21□□□□□ -1.42
RTA1YGR213C KNS1P32350 737 aaPredicted RBP6.21□□□□□ -1.42
RTA1YGR213C PPT1P53043 513 aa6.21□□□□□ -1.42
RTA1YGR213C BSC2Q05611 235 aa6.21□□□□□ -1.42
RTA1YGR213C TRK2P28584 889 aa6.2□□□□□ -1.42
RTA1YGR213C THI12P42883 340 aa6.2□□□□□ -1.42
RTA1YGR213C THI5P43534 340 aa6.2□□□□□ -1.42
RTA1YGR213C THI11P47183 340 aa6.2□□□□□ -1.42
RTA1YGR213C CTR9P89105 1077 aa6.2□□□□□ -1.42
RTA1YGR213C THI13Q07748 340 aa6.2□□□□□ -1.42
RTA1YGR213C MRP10O75012 95 aa6.19□□□□□ -1.42
RTA1YGR213C PHO4P07270 312 aaKnown RBP6.19□□□□□ -1.42
RTA1YGR213C PYC2P32327 1180 aaKnown RBP6.18□□□□□ -1.42
RTA1YGR213C SAM37P50110 327 aa6.18□□□□□ -1.42
RTA1YGR213C COBP00163 385 aa6.17□□□□□ -1.42
RTA1YGR213C ALD3P54114 506 aa6.17□□□□□ -1.42
RTA1YGR213C NOC3Q07896 663 aaPredicted RBP6.17□□□□□ -1.42
RTA1YGR213C FLP1P03870 423 aa6.16□□□□□ -1.42
RTA1YGR213C FUS1P11710 512 aa6.16□□□□□ -1.42
RTA1YGR213C INP51P40559 946 aaKnown RBP6.16□□□□□ -1.42
RTA1YGR213C YJL181WP46987 611 aa6.16□□□□□ -1.42
RTA1YGR213C RRP15Q06511 250 aaPredicted RBP6.16□□□□□ -1.42
RTA1YGR213C GCD6P32501 712 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms