RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	FAA4	P47912	694 aa	Known RBP	4.03	□□□□□ -1.76
CCM1	YGR150C	PUS6	P53294	404 aa		4.03	□□□□□ -1.76
CCM1	YGR150C	UTP13	Q05946	817 aa	Known RBP	4.03	□□□□□ -1.76
CCM1	YGR150C	FLC1	Q08967	793 aa		4.03	□□□□□ -1.76
CCM1	YGR150C	TMA17	Q12513	150 aa		4.03	□□□□□ -1.76
CCM1	YGR150C	PIF1	P07271	859 aa		4.03	□□□□□ -1.77
CCM1	YGR150C	ERR1	P0CX10	437 aa		4.03	□□□□□ -1.77
CCM1	YGR150C	ERR2	P0CX11	437 aa		4.03	□□□□□ -1.77
CCM1	YGR150C	OPI1	P21957	404 aa		4.03	□□□□□ -1.77
CCM1	YGR150C	TYW3	P53177	273 aa		4.03	□□□□□ -1.77
CCM1	YGR150C	NYV1	Q12255	253 aa		4.03	□□□□□ -1.77
CCM1	YGR150C	RPP1B	P10622	106 aa	Known RBP	4.02	□□□□□ -1.77
CCM1	YGR150C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
CCM1	YGR150C	ILV3	P39522	585 aa	Known RBP	4.02	□□□□□ -1.77
CCM1	YGR150C	RSP5	P39940	809 aa	Known RBP	4.02	□□□□□ -1.77
CCM1	YGR150C	YJR120W	P47157	116 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	SAM37	P50110	327 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	MEH1	Q02205	184 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	STE20	Q03497	939 aa	Known RBP	4.02	□□□□□ -1.77
CCM1	YGR150C	SND1	Q04007	877 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	TOS4	Q06266	489 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	YRR1	Q12172	810 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	HIR1	P32479	840 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	UFD2	P54860	961 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	MDM1	Q01846	1127 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	OPI10	Q08202	246 aa		4.02	□□□□□ -1.77
CCM1	YGR150C	TUM1	Q08686	304 aa	Known RBP	4.02	□□□□□ -1.77
CCM1	YGR150C	CIT1	P00890	479 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	MPH2	P0CD99	609 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	MPH3	P0CE00	602 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	NIT1	P40447	199 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	YGR053C	P53234	283 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	OXR1	Q08952	273 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	AI4	P03878	556 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	TAF13	P11747	167 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	CDC34	P14682	295 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	YKL069W	P36088	180 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	SLI15	P38283	698 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	NTG2	Q08214	380 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	SAM3	Q08986	587 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	APC11	Q12157	165 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	RRI2	Q12348	645 aa		4.01	□□□□□ -1.77
CCM1	YGR150C	HXK1	P04806	485 aa	Known RBP	4	□□□□□ -1.77
CCM1	YGR150C	YKL222C	P35995	705 aa		4	□□□□□ -1.77
CCM1	YGR150C	YGR237C	P50089	785 aa		4	□□□□□ -1.77
CCM1	YGR150C	YPR084W	Q06821	456 aa		4	□□□□□ -1.77
CCM1	YGR150C	PSK2	Q08217	1101 aa		4	□□□□□ -1.77
CCM1	YGR150C	GYP5	Q12344	894 aa		4	□□□□□ -1.77
CCM1	YGR150C	YEF3	P16521	1044 aa	Known RBP	4	□□□□□ -1.77
CCM1	YGR150C	TEC1	P18412	486 aa		4	□□□□□ -1.77
CCM1	YGR150C	SFP1	P32432	683 aa		4	□□□□□ -1.77
CCM1	YGR150C	FAA3	P39002	694 aa		4	□□□□□ -1.77
CCM1	YGR150C	TUB4	P53378	473 aa		4	□□□□□ -1.77
CCM1	YGR150C	SPP1	Q03012	353 aa		4	□□□□□ -1.77
CCM1	YGR150C	ATG13	Q06628	738 aa		4	□□□□□ -1.77
CCM1	YGR150C	RPB10	P22139	70 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	MSH2	P25847	964 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	GUT2	P32191	649 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	YAP1801	P38856	637 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	FAF1	P40546	346 aa	Predicted RBP	3.99	□□□□□ -1.77
CCM1	YGR150C	PEX21	P50091	288 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	YGR125W	P53273	1036 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	TGL2	P54857	326 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	CDC55	Q00362	526 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
CCM1	YGR150C	SRF1	Q12516	437 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	TY4B-P	A0A0B7P3V8	1104 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	CAN1	P04817	590 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	UBP1	P25037	809 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	YHL008C	P38750	627 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	YNL011C	P53980	444 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	UBX4	P54730	416 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	TBF1	Q02457	562 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	CDC73	Q06697	393 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	REC8	Q12188	680 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	TY4A-H	Q6Q5P6	413 aa		3.99	□□□□□ -1.77
CCM1	YGR150C	FOB1	O13329	566 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	CCP1	P00431	361 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	HSC82	P15108	705 aa	Known RBP	3.98	□□□□□ -1.77
CCM1	YGR150C	DUT1	P33317	147 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	GPP1	P41277	250 aa	Known RBP	3.98	□□□□□ -1.77
CCM1	YGR150C	NHA1	Q99271	985 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	PGI1	P12709	554 aa	Known RBP	3.98	□□□□□ -1.77
CCM1	YGR150C	YBR197C	P38306	217 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	GGA2	P38817	585 aa	Known RBP	3.98	□□□□□ -1.77
CCM1	YGR150C	AIM9	P40053	627 aa	Known RBP	3.98	□□□□□ -1.77
CCM1	YGR150C	FIG4	P42837	879 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	VNX1	P42839	908 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	HLJ1	P48353	224 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	ESC2	Q06340	456 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	BDS1	Q08347	646 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	RTP1	Q12751	981 aa		3.98	□□□□□ -1.77
CCM1	YGR150C	CYT1	P07143	309 aa		3.97	□□□□□ -1.77
CCM1	YGR150C	SWI3	P32591	825 aa		3.97	□□□□□ -1.77
CCM1	YGR150C	KTR2	P33550	425 aa		3.97	□□□□□ -1.77
CCM1	YGR150C	TFC3	P34111	1160 aa		3.97	□□□□□ -1.77
CCM1	YGR150C	CIC1	P38779	376 aa	Known RBP	3.97	□□□□□ -1.77
CCM1	YGR150C	PEA2	P40091	420 aa		3.97	□□□□□ -1.77
CCM1	YGR150C	PMT3	P47190	753 aa		3.97	□□□□□ -1.77
CCM1	YGR150C	CWH41	P53008	833 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms