RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W Q0182Q9ZZW1 134 aa3.61□□□□□ -1.83
SMD1YGR074W AI3P03877 415 aa3.6□□□□□ -1.83
SMD1YGR074W BIO2P32451 375 aa3.6□□□□□ -1.83
SMD1YGR074W RPL34AP87262 121 aaPredicted RBP3.6□□□□□ -1.83
SMD1YGR074W MLF3P32047 452 aa3.59□□□□□ -1.83
SMD1YGR074W NCL1P38205 684 aaKnown RBP3.59□□□□□ -1.83
SMD1YGR074W MTO1P53070 669 aa3.59□□□□□ -1.83
SMD1YGR074W YNL165WP53891 406 aa3.59□□□□□ -1.83
SMD1YGR074W PUB1P32588 453 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SMD1YGR074W YKL222CP35995 705 aa3.58□□□□□ -1.84
SMD1YGR074W SIS2P36024 562 aa3.58□□□□□ -1.84
SMD1YGR074W TOS1P38288 455 aa3.58□□□□□ -1.84
SMD1YGR074W RIM21P48565 533 aa3.58□□□□□ -1.84
SMD1YGR074W SUB2Q07478 446 aaKnown RBP3.58□□□□□ -1.84
SMD1YGR074W TSC13Q99190 310 aa3.58□□□□□ -1.84
SMD1YGR074W TRP3P00937 484 aa3.57□□□□□ -1.84
SMD1YGR074W SAC7P17121 654 aa3.57□□□□□ -1.84
SMD1YGR074W PDI1P17967 522 aaKnown RBP3.57□□□□□ -1.84
SMD1YGR074W YCR015CP25616 317 aa3.57□□□□□ -1.84
SMD1YGR074W COQ2P32378 372 aa3.57□□□□□ -1.84
SMD1YGR074W KAE1P36132 386 aa3.57□□□□□ -1.84
SMD1YGR074W GEF1P37020 779 aa3.57□□□□□ -1.84
SMD1YGR074W PRK1P40494 810 aa3.57□□□□□ -1.84
SMD1YGR074W NAR1P23503 491 aaKnown RBP3.56□□□□□ -1.84
SMD1YGR074W RRM3P38766 723 aa3.56□□□□□ -1.84
SMD1YGR074W GIS4Q04233 774 aa3.56□□□□□ -1.84
SMD1YGR074W CYT1P07143 309 aa3.55□□□□□ -1.84
SMD1YGR074W RDS2P19541 446 aaKnown RBP3.55□□□□□ -1.84
SMD1YGR074W CPS1P27614 576 aa3.55□□□□□ -1.84
SMD1YGR074W SFA1P32771 386 aa3.55□□□□□ -1.84
SMD1YGR074W CTH1P47976 325 aa3.55□□□□□ -1.84
SMD1YGR074W SKP1P52286 194 aa3.55□□□□□ -1.84
SMD1YGR074W ARI1P53111 347 aaKnown RBP3.55□□□□□ -1.84
SMD1YGR074W UTP4Q06679 776 aaKnown RBP3.55□□□□□ -1.84
SMD1YGR074W KAP122P32767 1081 aa3.54□□□□□ -1.84
SMD1YGR074W APM2P38700 605 aa3.54□□□□□ -1.84
SMD1YGR074W BRE4Q07660 1125 aa3.54□□□□□ -1.84
SMD1YGR074W SCD5P34758 872 aa3.53□□□□□ -1.84
SMD1YGR074W TTI1P36097 1038 aa3.53□□□□□ -1.84
SMD1YGR074W CUS1Q02554 436 aaPredicted RBP3.53□□□□□ -1.84
SMD1YGR074W ENO1P00924 437 aaKnown RBP3.52□□□□□ -1.85
SMD1YGR074W RSC6P25632 483 aa3.52□□□□□ -1.85
SMD1YGR074W SLD2P34252 453 aa3.52□□□□□ -1.85
SMD1YGR074W GAS5Q08193 484 aa3.52□□□□□ -1.85
SMD1YGR074W SLP1Q12232 587 aa3.52□□□□□ -1.85
SMD1YGR074W YLR122CQ12312 125 aa3.52□□□□□ -1.85
SMD1YGR074W MRX10Q05648 414 aa3.51□□□□□ -1.85
SMD1YGR074W RNQ1P25367 405 aa3.5□□□□□ -1.85
SMD1YGR074W CDC3P32457 520 aaKnown RBP3.5□□□□□ -1.85
SMD1YGR074W YNR040WP53736 256 aa3.5□□□□□ -1.85
SMD1YGR074W YML020WQ03722 664 aa3.5□□□□□ -1.85
SMD1YGR074W HAP4P14064 554 aa3.49□□□□□ -1.85
SMD1YGR074W CHS2P14180 963 aa3.49□□□□□ -1.85
SMD1YGR074W KTR7P40504 517 aa3.49□□□□□ -1.85
SMD1YGR074W MAG2Q06436 670 aaKnown RBP3.49□□□□□ -1.85
SMD1YGR074W UBP1P25037 809 aa3.48□□□□□ -1.85
SMD1YGR074W PHO87P25360 923 aa3.48□□□□□ -1.85
SMD1YGR074W NGR1P32831 672 aaKnown RBP3.48□□□□□ -1.85
SMD1YGR074W TGL4P36165 910 aa3.48□□□□□ -1.85
SMD1YGR074W GAS4Q08271 471 aa3.48□□□□□ -1.85
SMD1YGR074W NOB1Q08444 459 aaKnown RBP3.48□□□□□ -1.85
SMD1YGR074W TY4B-PA0A0B7P3V8 1104 aa3.47□□□□□ -1.85
SMD1YGR074W RPC31P17890 251 aa3.47□□□□□ -1.85
SMD1YGR074W PUP1P25043 261 aa3.47□□□□□ -1.85
SMD1YGR074W SAF1P38352 637 aa3.47□□□□□ -1.85
SMD1YGR074W QDR2P40474 542 aa3.47□□□□□ -1.85
SMD1YGR074W ACS2P52910 683 aaKnown RBP3.47□□□□□ -1.85
SMD1YGR074W DSE4P53753 1117 aa3.47□□□□□ -1.85
SMD1YGR074W ECM23Q02710 187 aa3.47□□□□□ -1.85
SMD1YGR074W TY4A-HQ6Q5P6 413 aa3.47□□□□□ -1.85
SMD1YGR074W PEP12P32854 288 aa3.46□□□□□ -1.86
SMD1YGR074W HXT5P38695 592 aa3.46□□□□□ -1.86
SMD1YGR074W NIT1P40447 199 aa3.46□□□□□ -1.86
SMD1YGR074W CWH41P53008 833 aa3.46□□□□□ -1.86
SMD1YGR074W YGR130CP53278 816 aa3.46□□□□□ -1.86
SMD1YGR074W IDI1P15496 288 aa3.45□□□□□ -1.86
SMD1YGR074W VAN1P23642 535 aa3.45□□□□□ -1.86
SMD1YGR074W GIP2P40036 548 aa3.45□□□□□ -1.86
SMD1YGR074W YER156CP40093 338 aaKnown RBP3.45□□□□□ -1.86
SMD1YGR074W YML083CQ04526 418 aa3.45□□□□□ -1.86
SMD1YGR074W RSC2Q06488 889 aa3.45□□□□□ -1.86
SMD1YGR074W MRP10O75012 95 aa3.44□□□□□ -1.86
SMD1YGR074W GAL2P13181 574 aa3.44□□□□□ -1.86
SMD1YGR074W UBX7P38349 436 aa3.44□□□□□ -1.86
SMD1YGR074W TED1P40533 473 aa3.44□□□□□ -1.86
SMD1YGR074W SOK2P53438 785 aaPredicted RBP3.44□□□□□ -1.86
SMD1YGR074W HAT1Q12341 374 aa3.44□□□□□ -1.86
SMD1YGR074W TY1A-NL1Q12391 440 aaKnown RBP3.44□□□□□ -1.86
SMD1YGR074W CYC7P00045 113 aa3.43□□□□□ -1.86
SMD1YGR074W ITC1P53125 1264 aa3.43□□□□□ -1.86
SMD1YGR074W ESC8Q08119 714 aa3.43□□□□□ -1.86
SMD1YGR074W NOP8Q08287 484 aaPredicted RBP3.43□□□□□ -1.86
SMD1YGR074W DYS1P38791 387 aa3.42□□□□□ -1.86
SMD1YGR074W AKR1P39010 764 aa3.42□□□□□ -1.86
SMD1YGR074W SPO74P45819 413 aa3.42□□□□□ -1.86
SMD1YGR074W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SMD1YGR074W YOR296WQ08748 1289 aa3.42□□□□□ -1.86
SMD1YGR074W NAM7P30771 971 aaKnown RBP3.41□□□□□ -1.86
SMD1YGR074W GIP1P38229 639 aa3.41□□□□□ -1.86
SMD1YGR074W YBR287WP38355 427 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms