RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C MNR2P35724 969 aa3.91□□□□□ -1.78
SPT4YGR063C MUD2P36084 527 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C TTI1P36097 1038 aa3.91□□□□□ -1.78
SPT4YGR063C RPC37P36121 282 aa3.91□□□□□ -1.78
SPT4YGR063C VPS29P38759 282 aa3.91□□□□□ -1.78
SPT4YGR063C SEC9P40357 651 aa3.91□□□□□ -1.78
SPT4YGR063C YRB1P41920 201 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C SAP155P43612 1002 aa3.91□□□□□ -1.78
SPT4YGR063C MAL13P53338 473 aa3.91□□□□□ -1.78
SPT4YGR063C ADE12P80210 433 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C RRB1Q04225 511 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C VPS20Q04272 221 aa3.91□□□□□ -1.78
SPT4YGR063C EIS1Q05050 843 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C RSA3Q05942 220 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C MAK21Q12176 1025 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C MSB4Q12317 492 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-HO13535 1793 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-DR5P0C2I2 1755 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-DR6P0C2I3 1755 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-LR2P0C2I5 1755 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-LR3P0C2I6 1755 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C TY1B-PR1P0C2I9 1755 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C TY1B-PR2P0C2J0 1756 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-PR3P0C2J1 1755 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C TY1B-JR1P47098 1755 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-ML2Q03434 1755 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C TY1B-ER1Q03612 1755 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-ML1Q04711 1755 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C TY1B-GR2Q12269 1755 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-OLQ12273 1755 aa3.91□□□□□ -1.78
SPT4YGR063C TY1B-PLQ12414 1755 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C MLP1Q02455 1875 aaKnown RBP3.9□□□□□ -1.78
SPT4YGR063C TRK1P12685 1235 aa3.9□□□□□ -1.79
SPT4YGR063C YEF3P16521 1044 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C TPD3P31383 635 aa3.9□□□□□ -1.79
SPT4YGR063C TIF3P34167 436 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C SLD2P34252 453 aa3.9□□□□□ -1.79
SPT4YGR063C YSW1P38280 609 aa3.9□□□□□ -1.79
SPT4YGR063C LIN1P38852 340 aaPredicted RBP3.9□□□□□ -1.79
SPT4YGR063C SEC26P41810 973 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C MTR4P47047 1073 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C ILM1P47155 203 aa3.9□□□□□ -1.79
SPT4YGR063C HST2P53686 357 aa3.9□□□□□ -1.79
SPT4YGR063C HEF3P53978 1044 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C SUB1P54000 292 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C ASI1P54074 624 aa3.9□□□□□ -1.79
SPT4YGR063C CUS1Q02554 436 aaPredicted RBP3.9□□□□□ -1.79
SPT4YGR063C AOS1Q06624 347 aa3.9□□□□□ -1.79
SPT4YGR063C IMH1Q06704 911 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C TSR1Q07381 788 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C CMS1Q07897 291 aaKnown RBP3.9□□□□□ -1.79
SPT4YGR063C APC11Q12157 165 aa3.9□□□□□ -1.79
SPT4YGR063C TY4A-HQ6Q5P6 413 aa3.9□□□□□ -1.79
SPT4YGR063C SWI1P09547 1314 aa3.9□□□□□ -1.79
SPT4YGR063C SES1P07284 462 aaKnown RBP3.89□□□□□ -1.79
SPT4YGR063C TRL1P09880 827 aaKnown RBP3.89□□□□□ -1.79
SPT4YGR063C NAT1P12945 854 aaKnown RBP3.89□□□□□ -1.79
SPT4YGR063C TAL1P15019 335 aaKnown RBP3.89□□□□□ -1.79
SPT4YGR063C ATE1P16639 503 aa3.89□□□□□ -1.79
SPT4YGR063C DPB3P27344 201 aa3.89□□□□□ -1.79
SPT4YGR063C YEL043WP32618 956 aa3.89□□□□□ -1.79
SPT4YGR063C HEL1P36113 551 aa3.89□□□□□ -1.79
SPT4YGR063C ESL2P36168 1195 aa3.89□□□□□ -1.79
SPT4YGR063C RCR1P38212 213 aa3.89□□□□□ -1.79
SPT4YGR063C DSF2P38213 736 aa3.89□□□□□ -1.79
SPT4YGR063C RFC5P38251 354 aa3.89□□□□□ -1.79
SPT4YGR063C RGD1P38339 666 aa3.89□□□□□ -1.79
SPT4YGR063C PPX1P38698 397 aa3.89□□□□□ -1.79
SPT4YGR063C SPT8P38915 602 aa3.89□□□□□ -1.79
SPT4YGR063C UBP9P39967 754 aa3.89□□□□□ -1.79
SPT4YGR063C NCS2P53923 493 aaPredicted RBP3.89□□□□□ -1.79
SPT4YGR063C VTC3Q02725 835 aa3.89□□□□□ -1.79
SPT4YGR063C VMS1Q04311 632 aaKnown RBP3.89□□□□□ -1.79
SPT4YGR063C LCB5Q06147 687 aaKnown RBP3.89□□□□□ -1.79
SPT4YGR063C SLX4Q12098 748 aa3.89□□□□□ -1.79
SPT4YGR063C LSO1Q3E827 93 aa3.89□□□□□ -1.79
SPT4YGR063C MDS3P53094 1487 aa3.89□□□□□ -1.79
SPT4YGR063C CHC1P22137 1653 aaKnown RBP3.89□□□□□ -1.79
SPT4YGR063C RPA190P10964 1664 aaKnown RBP3.88□□□□□ -1.79
SPT4YGR063C PMR1P13586 950 aa3.88□□□□□ -1.79
SPT4YGR063C KRS1P15180 591 aaKnown RBP3.88□□□□□ -1.79
SPT4YGR063C PRP16P15938 1071 aaPredicted RBP3.88□□□□□ -1.79
SPT4YGR063C KAR9P32526 644 aa3.88□□□□□ -1.79
SPT4YGR063C RAD5P32849 1169 aaPredicted RBP3.88□□□□□ -1.79
SPT4YGR063C TFC3P34111 1160 aa3.88□□□□□ -1.79
SPT4YGR063C LHS1P36016 881 aa3.88□□□□□ -1.79
SPT4YGR063C DID4P36108 232 aa3.88□□□□□ -1.79
SPT4YGR063C SRL3P36167 246 aa3.88□□□□□ -1.79
SPT4YGR063C UBP14P38237 781 aaKnown RBP3.88□□□□□ -1.79
SPT4YGR063C RTR1P40084 226 aaPredicted RBP3.88□□□□□ -1.79
SPT4YGR063C CCT5P40413 562 aaKnown RBP3.88□□□□□ -1.79
SPT4YGR063C FKH1P40466 484 aa3.88□□□□□ -1.79
SPT4YGR063C TAF1P46677 1066 aa3.88□□□□□ -1.79
SPT4YGR063C APL6P46682 809 aa3.88□□□□□ -1.79
SPT4YGR063C ALD2P47771 506 aa3.88□□□□□ -1.79
SPT4YGR063C CTH1P47976 325 aa3.88□□□□□ -1.79
SPT4YGR063C ORM1P53224 222 aa3.88□□□□□ -1.79
SPT4YGR063C YNL247WP53852 767 aaKnown RBP3.88□□□□□ -1.79
SPT4YGR063C RCF1Q03713 159 aa3.88□□□□□ -1.79
SPT4YGR063C YDR338CQ05497 695 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms