RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W BDH2P39713 417 aa8.4□□□□□ -1.06
SNF4YGL115W PAC1P39946 494 aaKnown RBP8.4□□□□□ -1.06
SNF4YGL115W MAM1P40065 302 aa8.4□□□□□ -1.06
SNF4YGL115W PRP43P53131 767 aaKnown RBP8.4□□□□□ -1.06
SNF4YGL115W LCD1Q04377 747 aa8.4□□□□□ -1.06
SNF4YGL115W NKP2Q06162 153 aa8.4□□□□□ -1.06
SNF4YGL115W LAM6Q08001 693 aa8.4□□□□□ -1.06
SNF4YGL115W NOP58Q12499 511 aaKnown RBP8.4□□□□□ -1.06
SNF4YGL115W DLD1P32891 587 aa8.39□□□□□ -1.07
SNF4YGL115W LEO1P38439 464 aa8.39□□□□□ -1.07
SNF4YGL115W AKL1P38080 1108 aaKnown RBP8.38□□□□□ -1.07
SNF4YGL115W AIR1P40507 360 aaKnown RBP8.38□□□□□ -1.07
SNF4YGL115W BDP1P46678 594 aa8.38□□□□□ -1.07
SNF4YGL115W DSD1P53095 428 aa8.38□□□□□ -1.07
SNF4YGL115W TUB4P53378 473 aa8.38□□□□□ -1.07
SNF4YGL115W AGE1Q04412 482 aa8.38□□□□□ -1.07
SNF4YGL115W BNI1P41832 1953 aa8.37□□□□□ -1.07
SNF4YGL115W RPS19AP07280 144 aaKnown RBP8.37□□□□□ -1.07
SNF4YGL115W RPS19BP07281 144 aaPredicted RBP8.37□□□□□ -1.07
SNF4YGL115W SIT4P20604 311 aa8.37□□□□□ -1.07
SNF4YGL115W YPP1P46951 817 aa8.37□□□□□ -1.07
SNF4YGL115W YNL115CP53925 644 aa8.37□□□□□ -1.07
SNF4YGL115W ROM2P51862 1356 aaKnown RBP8.36□□□□□ -1.07
SNF4YGL115W YNG2P38806 282 aaKnown RBP8.36□□□□□ -1.07
SNF4YGL115W HYR1P40581 163 aaKnown RBP8.36□□□□□ -1.07
SNF4YGL115W ZDS1P50111 915 aaKnown RBP8.36□□□□□ -1.07
SNF4YGL115W HST1P53685 503 aa8.36□□□□□ -1.07
SNF4YGL115W SRT1Q03175 343 aa8.36□□□□□ -1.07
SNF4YGL115W CDC16P09798 840 aa8.35□□□□□ -1.07
SNF4YGL115W RKM3P38222 552 aa8.35□□□□□ -1.07
SNF4YGL115W CIR1P42940 261 aa8.35□□□□□ -1.07
SNF4YGL115W RSC1P53236 928 aa8.35□□□□□ -1.07
SNF4YGL115W FPK1P53739 893 aa8.35□□□□□ -1.07
SNF4YGL115W RIA1P53893 1110 aa8.35□□□□□ -1.07
SNF4YGL115W AIM44Q99299 758 aa8.35□□□□□ -1.07
SNF4YGL115W ADE6P38972 1358 aaKnown RBP8.35□□□□□ -1.07
SNF4YGL115W BRN1P38170 754 aa8.34□□□□□ -1.07
SNF4YGL115W RFC1P38630 861 aaKnown RBP8.34□□□□□ -1.07
SNF4YGL115W KRE33P53914 1056 aaKnown RBP8.34□□□□□ -1.07
SNF4YGL115W CSI1Q04368 295 aa8.34□□□□□ -1.07
SNF4YGL115W RNR2P09938 399 aaKnown RBP8.32□□□□□ -1.08
SNF4YGL115W RPN12P32496 274 aa8.32□□□□□ -1.08
SNF4YGL115W GLC3P32775 704 aa8.32□□□□□ -1.08
SNF4YGL115W NTH2P35172 780 aa8.32□□□□□ -1.08
SNF4YGL115W NMD2P38798 1089 aaKnown RBP8.32□□□□□ -1.08
SNF4YGL115W NPA3P47122 385 aa8.32□□□□□ -1.08
SNF4YGL115W SPO1P53541 631 aa8.32□□□□□ -1.08
SNF4YGL115W YMR196WQ04336 1088 aa8.32□□□□□ -1.08
SNF4YGL115W ITT1Q04638 464 aa8.32□□□□□ -1.08
SNF4YGL115W RSM25P40496 264 aa8.31□□□□□ -1.08
SNF4YGL115W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
SNF4YGL115W ATF2P53296 535 aa8.31□□□□□ -1.08
SNF4YGL115W HRQ1Q05549 1077 aa8.31□□□□□ -1.08
SNF4YGL115W GAS4Q08271 471 aa8.31□□□□□ -1.08
SNF4YGL115W LYS2P07702 1392 aa8.31□□□□□ -1.08
SNF4YGL115W YRF1-2P40105 1681 aa8.3□□□□□ -1.08
SNF4YGL115W RPS24AP0CX31 135 aaKnown RBP8.3□□□□□ -1.08
SNF4YGL115W RPS24BP0CX32 135 aaKnown RBP8.3□□□□□ -1.08
SNF4YGL115W SLY41P22215 453 aa8.3□□□□□ -1.08
SNF4YGL115W SCJ1P25303 377 aa8.3□□□□□ -1.08
SNF4YGL115W HGH1P48362 394 aaKnown RBP8.3□□□□□ -1.08
SNF4YGL115W ESC2Q06340 456 aa8.3□□□□□ -1.08
SNF4YGL115W DUR1,2P32528 1835 aaKnown RBP8.3□□□□□ -1.08
SNF4YGL115W MOD5P07884 428 aa8.29□□□□□ -1.08
SNF4YGL115W GCD7P32502 381 aaPredicted RBP8.29□□□□□ -1.08
SNF4YGL115W RVS167P39743 482 aaKnown RBP8.29□□□□□ -1.08
SNF4YGL115W HXT13P39924 564 aa8.29□□□□□ -1.08
SNF4YGL115W KRI1P42846 591 aaKnown RBP8.29□□□□□ -1.08
SNF4YGL115W YNR029CP53729 429 aaKnown RBP8.29□□□□□ -1.08
SNF4YGL115W VPS20Q04272 221 aa8.29□□□□□ -1.08
SNF4YGL115W BIK1P11709 440 aa8.28□□□□□ -1.08
SNF4YGL115W RPN1P38764 993 aaKnown RBP8.28□□□□□ -1.08
SNF4YGL115W MDG1P53885 366 aa8.28□□□□□ -1.08
SNF4YGL115W RRP5Q05022 1729 aaKnown RBP8.27□□□□□ -1.09
SNF4YGL115W TRL1P09880 827 aaKnown RBP8.27□□□□□ -1.09
SNF4YGL115W MCM2P29469 868 aa8.27□□□□□ -1.09
SNF4YGL115W MPE1P35728 441 aaKnown RBP8.27□□□□□ -1.09
SNF4YGL115W TPM2P40414 161 aa8.27□□□□□ -1.09
SNF4YGL115W YNR021WP53723 404 aaKnown RBP8.27□□□□□ -1.09
SNF4YGL115W PUS5Q06244 254 aa8.27□□□□□ -1.09
SNF4YGL115W BMS1Q08965 1183 aaKnown RBP8.27□□□□□ -1.09
SNF4YGL115W MIC60P36112 540 aa8.26□□□□□ -1.09
SNF4YGL115W HXT17P53631 564 aa8.26□□□□□ -1.09
SNF4YGL115W CTF4Q01454 927 aa8.26□□□□□ -1.09
SNF4YGL115W VAS1P07806 1104 aaKnown RBP8.25□□□□□ -1.09
SNF4YGL115W TAF13P11747 167 aa8.25□□□□□ -1.09
SNF4YGL115W ELM1P32801 640 aa8.25□□□□□ -1.09
SNF4YGL115W STU2P46675 888 aa8.25□□□□□ -1.09
SNF4YGL115W COQ4O13525 335 aa8.24□□□□□ -1.09
SNF4YGL115W YIL177CP40434 1758 aa8.24□□□□□ -1.09
SNF4YGL115W YJL225CP40889 1758 aa8.24□□□□□ -1.09
SNF4YGL115W TCD1P38756 429 aa8.23□□□□□ -1.09
SNF4YGL115W HOS3Q02959 697 aaKnown RBP8.23□□□□□ -1.09
SNF4YGL115W AOS1Q06624 347 aa8.23□□□□□ -1.09
SNF4YGL115W TY4B-HP0C2J7 1802 aa8.22□□□□□ -1.09
SNF4YGL115W TY4B-JP47024 1803 aa8.22□□□□□ -1.09
SNF4YGL115W CDC4P07834 779 aa8.22□□□□□ -1.09
SNF4YGL115W UGA3P26370 528 aa8.22□□□□□ -1.09
SNF4YGL115W SIS2P36024 562 aa8.22□□□□□ -1.09
SNF4YGL115W HST2P53686 357 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms