RNA–Protein interactions for RNA: YFL045C

SEC53, Transcript of Phosphomannomutase, yeast

Gene SEC53, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC53	YFL045C	SCD5	P34758	872 aa		5.12	□□□□□ -1.59
SEC53	YFL045C	YMR265C	Q03508	461 aa	Known RBP	5.12	□□□□□ -1.59
SEC53	YFL045C	CAB1	Q04430	367 aa		5.12	□□□□□ -1.59
SEC53	YFL045C	TRS33	Q99394	268 aa		5.12	□□□□□ -1.59
SEC53	YFL045C	TOP2	P06786	1428 aa	Known RBP	5.12	□□□□□ -1.59
SEC53	YFL045C	CEM1	P39525	442 aa		5.11	□□□□□ -1.59
SEC53	YFL045C	NOP2	P40991	618 aa	Known RBP	5.11	□□□□□ -1.59
SEC53	YFL045C	CWC15	Q03772	175 aa	Known RBP	5.11	□□□□□ -1.59
SEC53	YFL045C	PUF6	Q04373	656 aa	Known RBP	5.11	□□□□□ -1.59
SEC53	YFL045C	Q0182	Q9ZZW1	134 aa		5.11	□□□□□ -1.59
SEC53	YFL045C	STH1	P32597	1359 aa		5.11	□□□□□ -1.59
SEC53	YFL045C	RPO31	P04051	1460 aa		5.11	□□□□□ -1.59
SEC53	YFL045C	SCC2	Q04002	1493 aa		5.11	□□□□□ -1.59
SEC53	YFL045C	BPT1	P14772	1559 aa		5.11	□□□□□ -1.59
SEC53	YFL045C	KOG1	P38873	1557 aa		5.1	□□□□□ -1.59
SEC53	YFL045C	SPR3	P41901	512 aa		5.1	□□□□□ -1.59
SEC53	YFL045C	ATG2	P53855	1592 aa		5.09	□□□□□ -1.59
SEC53	YFL045C	RGP1	P16664	663 aa		5.09	□□□□□ -1.59
SEC53	YFL045C	MRPL16	P38064	232 aa		5.09	□□□□□ -1.59
SEC53	YFL045C	YTA6	P40328	754 aa		5.09	□□□□□ -1.59
SEC53	YFL045C	SKP1	P52286	194 aa		5.09	□□□□□ -1.59
SEC53	YFL045C	KRE33	P53914	1056 aa	Known RBP	5.09	□□□□□ -1.59
SEC53	YFL045C	RKR1	Q04781	1562 aa		5.08	□□□□□ -1.6
SEC53	YFL045C	SSM4	P40318	1319 aa		5.08	□□□□□ -1.6
SEC53	YFL045C	MSC7	P38694	644 aa		5.08	□□□□□ -1.6
SEC53	YFL045C	CWH41	P53008	833 aa		5.08	□□□□□ -1.6
SEC53	YFL045C	STB3	Q12427	513 aa		5.08	□□□□□ -1.6
SEC53	YFL045C	SNQ2	P32568	1501 aa	Known RBP	5.07	□□□□□ -1.6
SEC53	YFL045C	SRS2	P12954	1174 aa		5.07	□□□□□ -1.6
SEC53	YFL045C	RPC31	P17890	251 aa		5.07	□□□□□ -1.6
SEC53	YFL045C	YBR197C	P38306	217 aa		5.07	□□□□□ -1.6
SEC53	YFL045C	TPS3	P38426	1054 aa	Known RBP	5.07	□□□□□ -1.6
SEC53	YFL045C	ALD4	P46367	519 aa	Known RBP	5.07	□□□□□ -1.6
SEC53	YFL045C	ADE12	P80210	433 aa	Known RBP	5.07	□□□□□ -1.6
SEC53	YFL045C	NUP170	P38181	1502 aa		5.07	□□□□□ -1.6
SEC53	YFL045C	MRPL33	P20084	86 aa		5.06	□□□□□ -1.6
SEC53	YFL045C	POL5	P39985	1022 aa	Known RBP	5.06	□□□□□ -1.6
SEC53	YFL045C	KAP122	P32767	1081 aa		5.05	□□□□□ -1.6
SEC53	YFL045C	ENP1	P38333	483 aa	Known RBP	5.05	□□□□□ -1.6
SEC53	YFL045C	TY1A-DR2	Q03964	440 aa	Known RBP	5.05	□□□□□ -1.6
SEC53	YFL045C	GEA1	P47102	1408 aa	Predicted RBP	5.05	□□□□□ -1.6
SEC53	YFL045C	PEP1	P32319	1579 aa		5.04	□□□□□ -1.6
SEC53	YFL045C	FPS1	P23900	669 aa		5.04	□□□□□ -1.6
SEC53	YFL045C	PUN1	Q06991	263 aa		5.04	□□□□□ -1.6
SEC53	YFL045C	YCF1	P39109	1515 aa	Known RBP	5.03	□□□□□ -1.6
SEC53	YFL045C	GPM1	P00950	247 aa	Known RBP	5.03	□□□□□ -1.6
SEC53	YFL045C	RPP1A	P05318	106 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC53	YFL045C	VMA3	P25515	160 aa		5.03	□□□□□ -1.6
SEC53	YFL045C	QDR2	P40474	542 aa		5.03	□□□□□ -1.6
SEC53	YFL045C	YFL066C	P43538	392 aa		5.03	□□□□□ -1.6
SEC53	YFL045C	MTO1	P53070	669 aa		5.03	□□□□□ -1.6
SEC53	YFL045C	CUS1	Q02554	436 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC53	YFL045C	PNP1	Q05788	311 aa		5.03	□□□□□ -1.6
SEC53	YFL045C	PAN1	P32521	1480 aa		5.02	□□□□□ -1.61
SEC53	YFL045C	MDS3	P53094	1487 aa		5.02	□□□□□ -1.61
SEC53	YFL045C	ISC10	P32645	267 aa		5.02	□□□□□ -1.61
SEC53	YFL045C	KTR2	P33550	425 aa		5.02	□□□□□ -1.61
SEC53	YFL045C	FOX2	Q02207	900 aa	Known RBP	5.02	□□□□□ -1.61
SEC53	YFL045C	APC11	Q12157	165 aa		5.02	□□□□□ -1.61
SEC53	YFL045C	TSC11	P40061	1430 aa		5.02	□□□□□ -1.61
SEC53	YFL045C	SEC3	P33332	1336 aa	Known RBP	5.01	□□□□□ -1.61
SEC53	YFL045C	KNS1	P32350	737 aa	Predicted RBP	5.01	□□□□□ -1.61
SEC53	YFL045C	BOI1	P38041	980 aa	Known RBP	5.01	□□□□□ -1.61
SEC53	YFL045C	HEH2	Q03281	663 aa		5.01	□□□□□ -1.61
SEC53	YFL045C	LSO1	Q3E827	93 aa		5.01	□□□□□ -1.61
SEC53	YFL045C	PDC5	P16467	563 aa	Known RBP	5	□□□□□ -1.61
SEC53	YFL045C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
SEC53	YFL045C	YNR040W	P53736	256 aa		5	□□□□□ -1.61
SEC53	YFL045C	AI1	P03875	834 aa		4.99	□□□□□ -1.61
SEC53	YFL045C	SSA1	P10591	642 aa	Known RBP	4.99	□□□□□ -1.61
SEC53	YFL045C	APM2	P38700	605 aa		4.99	□□□□□ -1.61
SEC53	YFL045C	DYS1	P38791	387 aa		4.99	□□□□□ -1.61
SEC53	YFL045C	BOL3	P39724	118 aa		4.99	□□□□□ -1.61
SEC53	YFL045C	ITC1	P53125	1264 aa		4.99	□□□□□ -1.61
SEC53	YFL045C	YOR296W	Q08748	1289 aa		4.99	□□□□□ -1.61
SEC53	YFL045C	NCL1	P38205	684 aa	Known RBP	4.98	□□□□□ -1.61
SEC53	YFL045C	YER156C	P40093	338 aa	Known RBP	4.98	□□□□□ -1.61
SEC53	YFL045C	PRK1	P40494	810 aa		4.98	□□□□□ -1.61
SEC53	YFL045C	IDI1	P15496	288 aa		4.97	□□□□□ -1.61
SEC53	YFL045C	MDJ1	P35191	511 aa		4.97	□□□□□ -1.61
SEC53	YFL045C	LDH1	P38139	375 aa		4.97	□□□□□ -1.61
SEC53	YFL045C	BSD2	P38356	321 aa		4.97	□□□□□ -1.61
SEC53	YFL045C	PHM7	Q12252	991 aa		4.97	□□□□□ -1.61
SEC53	YFL045C	MSN1	P22148	382 aa		4.96	□□□□□ -1.62
SEC53	YFL045C	GIP1	P38229	639 aa		4.96	□□□□□ -1.62
SEC53	YFL045C	ICP55	P40051	511 aa		4.96	□□□□□ -1.62
SEC53	YFL045C	SBE2	P42223	864 aa	Known RBP	4.96	□□□□□ -1.62
SEC53	YFL045C	PDR15	Q04182	1529 aa	Known RBP	4.96	□□□□□ -1.62
SEC53	YFL045C	SNT2	P53127	1403 aa		4.96	□□□□□ -1.62
SEC53	YFL045C	RRN6	P32786	894 aa		4.95	□□□□□ -1.62
SEC53	YFL045C	RPB10	P22139	70 aa		4.94	□□□□□ -1.62
SEC53	YFL045C	GEF1	P37020	779 aa		4.94	□□□□□ -1.62
SEC53	YFL045C	ISW1	P38144	1129 aa		4.94	□□□□□ -1.62
SEC53	YFL045C	HXT8	P40886	569 aa		4.94	□□□□□ -1.62
SEC53	YFL045C	NSG2	P53898	299 aa		4.94	□□□□□ -1.62
SEC53	YFL045C	RPL34A	P87262	121 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC53	YFL045C	THI72	Q08579	599 aa		4.94	□□□□□ -1.62
SEC53	YFL045C	MCX1	P38323	520 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC53	YFL045C	RGD2	P43556	714 aa		4.93	□□□□□ -1.62
SEC53	YFL045C	VPS15	P22219	1454 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms