RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C ENT3P47160 408 aa12.3□□□□□ -0.44
CCA1YER168C YPL150WQ12152 901 aa12.3□□□□□ -0.44
CCA1YER168C OPI1P21957 404 aa12.29□□□□□ -0.44
CCA1YER168C MNN4P36044 1178 aa12.29□□□□□ -0.44
CCA1YER168C ARP5P53946 755 aa12.29□□□□□ -0.44
CCA1YER168C ELG1Q12050 791 aa12.29□□□□□ -0.44
CCA1YER168C ADR1P07248 1323 aa12.29□□□□□ -0.44
CCA1YER168C EBP2P36049 427 aaKnown RBP12.28□□□□□ -0.44
CCA1YER168C MIC60P36112 540 aa12.28□□□□□ -0.44
CCA1YER168C TCB2P48231 1178 aa12.28□□□□□ -0.44
CCA1YER168C PSK2Q08217 1101 aa12.28□□□□□ -0.44
CCA1YER168C NYV1Q12255 253 aa12.28□□□□□ -0.44
CCA1YER168C LAM4P38800 1345 aa12.28□□□□□ -0.44
CCA1YER168C YMR147WP40218 223 aaKnown RBP12.27□□□□□ -0.44
CCA1YER168C BBC1P47068 1157 aa12.27□□□□□ -0.44
CCA1YER168C RDS1P25611 832 aa12.26□□□□□ -0.45
CCA1YER168C NPR3P38742 1146 aa12.26□□□□□ -0.45
CCA1YER168C YHL017WP38745 532 aa12.26□□□□□ -0.45
CCA1YER168C MATALPHA2P0CY08 210 aa12.26□□□□□ -0.45
CCA1YER168C HMLALPHA2P0CY09 210 aa12.26□□□□□ -0.45
CCA1YER168C PEP3P27801 918 aa12.26□□□□□ -0.45
CCA1YER168C FBP26P32604 452 aa12.26□□□□□ -0.45
CCA1YER168C MRPL10P36520 322 aa12.26□□□□□ -0.45
CCA1YER168C ECM23Q02710 187 aa12.26□□□□□ -0.45
CCA1YER168C PKH3Q03306 898 aaPredicted RBP12.26□□□□□ -0.45
CCA1YER168C LAM6Q08001 693 aa12.26□□□□□ -0.45
CCA1YER168C YKE2P52553 114 aa12.25□□□□□ -0.45
CCA1YER168C SSL2Q00578 843 aa12.25□□□□□ -0.45
CCA1YER168C ETT1Q08421 412 aaKnown RBP12.25□□□□□ -0.45
CCA1YER168C GRE2Q12068 342 aaKnown RBP12.25□□□□□ -0.45
CCA1YER168C MAL33P38157 468 aa12.24□□□□□ -0.45
CCA1YER168C MSB4Q12317 492 aa12.24□□□□□ -0.45
CCA1YER168C HAT1Q12341 374 aa12.24□□□□□ -0.45
CCA1YER168C TRS33Q99394 268 aa12.24□□□□□ -0.45
CCA1YER168C POM152P39685 1337 aa12.24□□□□□ -0.45
CCA1YER168C IMP2'P32351 346 aa12.23□□□□□ -0.45
CCA1YER168C HAL5P38970 855 aaKnown RBP12.23□□□□□ -0.45
CCA1YER168C RRI2Q12348 645 aa12.23□□□□□ -0.45
CCA1YER168C DDP1Q99321 188 aaKnown RBP12.23□□□□□ -0.45
CCA1YER168C TAF13P11747 167 aa12.22□□□□□ -0.45
CCA1YER168C MPE1P35728 441 aaKnown RBP12.22□□□□□ -0.45
CCA1YER168C YLR407WQ06070 228 aa12.22□□□□□ -0.45
CCA1YER168C ATE1P16639 503 aa12.21□□□□□ -0.46
CCA1YER168C RFC5P38251 354 aa12.21□□□□□ -0.46
CCA1YER168C ESF1Q06344 628 aaKnown RBP12.21□□□□□ -0.46
CCA1YER168C PRP40P33203 583 aaKnown RBP12.2□□□□□ -0.46
CCA1YER168C SKI2P35207 1287 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
CCA1YER168C YFR006WP43590 535 aa12.2□□□□□ -0.46
CCA1YER168C KAR5Q04746 504 aa12.2□□□□□ -0.46
CCA1YER168C SGD1Q06132 899 aa12.2□□□□□ -0.46
CCA1YER168C PIF1P07271 859 aa12.19□□□□□ -0.46
CCA1YER168C GLO3P38682 493 aaKnown RBP12.19□□□□□ -0.46
CCA1YER168C BUD6P41697 788 aa12.19□□□□□ -0.46
CCA1YER168C SSF2Q12153 453 aaPredicted RBP12.19□□□□□ -0.46
CCA1YER168C TAH18Q12181 623 aa12.19□□□□□ -0.46
CCA1YER168C MET1P36150 593 aa12.19□□□□□ -0.46
CCA1YER168C RPN11P43588 306 aaKnown RBP12.19□□□□□ -0.46
CCA1YER168C GPA1P08539 472 aa12.18□□□□□ -0.46
CCA1YER168C NGR1P32831 672 aaKnown RBP12.18□□□□□ -0.46
CCA1YER168C YER130CP39959 443 aa12.17□□□□□ -0.46
CCA1YER168C EPL1P43572 832 aa12.17□□□□□ -0.46
CCA1YER168C SES1P07284 462 aaKnown RBP12.16□□□□□ -0.46
CCA1YER168C CYC8P14922 966 aa12.16□□□□□ -0.46
CCA1YER168C YPT11P48559 417 aa12.16□□□□□ -0.46
CCA1YER168C UBP10P53874 792 aaPredicted RBP12.15□□□□□ -0.46
CCA1YER168C TIM50Q02776 476 aa12.15□□□□□ -0.46
CCA1YER168C ESC2Q06340 456 aa12.15□□□□□ -0.46
CCA1YER168C PPM2Q08282 695 aa12.15□□□□□ -0.46
CCA1YER168C CRG1P38892 291 aaRIP-Chip data12.15□□□□□ -0.47not detected
CCA1YER168C NPR2P39923 615 aa12.15□□□□□ -0.47
CCA1YER168C YIL055CP40523 627 aaKnown RBP12.15□□□□□ -0.47
CCA1YER168C ENP2P48234 707 aaKnown RBP12.15□□□□□ -0.47
CCA1YER168C ALD3P54114 506 aa12.15□□□□□ -0.47
CCA1YER168C THI3Q07471 609 aa12.15□□□□□ -0.47
CCA1YER168C YJL181WP46987 611 aa12.14□□□□□ -0.47
CCA1YER168C IRC8P47046 822 aa12.14□□□□□ -0.47
CCA1YER168C SPN1Q06505 410 aaPredicted RBP12.14□□□□□ -0.47
CCA1YER168C RER2P35196 286 aa12.13□□□□□ -0.47
CCA1YER168C SIS2P36024 562 aa12.13□□□□□ -0.47
CCA1YER168C RFT1P38206 574 aaPredicted RBP12.13□□□□□ -0.47
CCA1YER168C RAT1Q02792 1006 aaKnown RBP12.13□□□□□ -0.47
CCA1YER168C SRC1Q03707 834 aa12.13□□□□□ -0.47
CCA1YER168C VMS1Q04311 632 aaKnown RBP12.13□□□□□ -0.47
CCA1YER168C NOP58Q12499 511 aaKnown RBP12.13□□□□□ -0.47
CCA1YER168C PGI1P12709 554 aaKnown RBP12.12□□□□□ -0.47
CCA1YER168C MGM1P32266 881 aa12.12□□□□□ -0.47
CCA1YER168C GRX7P38068 203 aa12.12□□□□□ -0.47
CCA1YER168C FYV10P40492 516 aa12.12□□□□□ -0.47
CCA1YER168C EST2Q06163 884 aa12.12□□□□□ -0.47
CCA1YER168C DIT2P21595 489 aa12.11□□□□□ -0.47
CCA1YER168C RRM3P38766 723 aa12.11□□□□□ -0.47
CCA1YER168C STU2P46675 888 aa12.11□□□□□ -0.47
CCA1YER168C PFK2P16862 959 aaKnown RBP RIP-Chip data12.11□□□□□ -0.47not detected
CCA1YER168C COQ1P18900 473 aa12.11□□□□□ -0.47
CCA1YER168C SRP40P32583 406 aaPredicted RBP12.11□□□□□ -0.47
CCA1YER168C YIR042CP40586 236 aa12.11□□□□□ -0.47
CCA1YER168C FAS2P19097 1887 aaKnown RBP12.1□□□□□ -0.47
CCA1YER168C HSP82P02829 709 aaKnown RBP12.1□□□□□ -0.47
CCA1YER168C MPH3P0CE00 602 aa12.1□□□□□ -0.47
CCA1YER168C INM2Q05533 292 aa12.1□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms