RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W FIR1P40020 876 aa10.2□□□□□ -0.78
LCP5YER127W UBP2Q01476 1272 aa10.2□□□□□ -0.78
LCP5YER127W PDC6P26263 563 aaKnown RBP10.19□□□□□ -0.78
LCP5YER127W SMC1P32908 1225 aa10.19□□□□□ -0.78
LCP5YER127W KTR2P33550 425 aa10.19□□□□□ -0.78
LCP5YER127W MET4P32389 672 aa10.18□□□□□ -0.78
LCP5YER127W SRC1Q03707 834 aa10.18□□□□□ -0.78
LCP5YER127W PSH1Q12161 406 aa10.18□□□□□ -0.78
LCP5YER127W ATE1P16639 503 aa10.17□□□□□ -0.78
LCP5YER127W GPI13Q07830 1017 aa10.17□□□□□ -0.78
LCP5YER127W ALD2P47771 506 aa10.16□□□□□ -0.78
LCP5YER127W OPT2Q06593 877 aa10.16□□□□□ -0.78
LCP5YER127W MNL2Q12205 849 aa10.16□□□□□ -0.78
LCP5YER127W MSN1P22148 382 aa10.15□□□□□ -0.78
LCP5YER127W MGE1P38523 228 aa10.15□□□□□ -0.78
LCP5YER127W NOP7P53261 605 aaKnown RBP10.15□□□□□ -0.78
LCP5YER127W YNL011CP53980 444 aa10.15□□□□□ -0.78
LCP5YER127W RAD55P38953 406 aa10.14□□□□□ -0.79
LCP5YER127W UBP15P50101 1230 aa10.13□□□□□ -0.79
LCP5YER127W MON2P48563 1636 aaPredicted RBP10.13□□□□□ -0.79
LCP5YER127W LEU1P07264 779 aaKnown RBP10.12□□□□□ -0.79
LCP5YER127W RRP15Q06511 250 aaPredicted RBP10.12□□□□□ -0.79
LCP5YER127W ISW1P38144 1129 aa10.11□□□□□ -0.79
LCP5YER127W YBR287WP38355 427 aa10.11□□□□□ -0.79
LCP5YER127W GIP1P38229 639 aa10.1□□□□□ -0.79
LCP5YER127W NTA1P40354 457 aa10.1□□□□□ -0.79
LCP5YER127W RGD2P43556 714 aa10.1□□□□□ -0.79
LCP5YER127W CDC55Q00362 526 aa10.1□□□□□ -0.79
LCP5YER127W CDC19P00549 500 aaKnown RBP10.09□□□□□ -0.79
LCP5YER127W RPC31P17890 251 aa10.09□□□□□ -0.79
LCP5YER127W SEC8P32855 1065 aa10.09□□□□□ -0.79
LCP5YER127W BSD2P38356 321 aa10.09□□□□□ -0.79
LCP5YER127W OSH7P38755 437 aa10.09□□□□□ -0.79
LCP5YER127W SCW11P53189 542 aa10.09□□□□□ -0.79
LCP5YER127W NAB2P32505 525 aaKnown RBP RIP-Chip data10.08□□□□□ -0.8 RIP-Chip
LCP5YER127W SAM37P50110 327 aa10.08□□□□□ -0.8
LCP5YER127W CUS1Q02554 436 aaPredicted RBP10.08□□□□□ -0.8
LCP5YER127W OYE2Q03558 400 aaKnown RBP10.08□□□□□ -0.8
LCP5YER127W YOR296WQ08748 1289 aa10.08□□□□□ -0.8
LCP5YER127W PHO4P07270 312 aaKnown RBP10.07□□□□□ -0.8
LCP5YER127W RGP1P16664 663 aa10.07□□□□□ -0.8
LCP5YER127W IRS4P36115 615 aaKnown RBP10.07□□□□□ -0.8
LCP5YER127W GLY1P37303 387 aaKnown RBP10.07□□□□□ -0.8
LCP5YER127W RSC4Q02206 625 aa10.07□□□□□ -0.8
LCP5YER127W TIF6Q12522 245 aaKnown RBP10.07□□□□□ -0.8
LCP5YER127W MRPL16P38064 232 aa10.06□□□□□ -0.8
LCP5YER127W PSY2P40164 858 aa10.06□□□□□ -0.8
LCP5YER127W GCD6P32501 712 aaKnown RBP10.05□□□□□ -0.8
LCP5YER127W RPT1P33299 467 aaKnown RBP10.05□□□□□ -0.8
LCP5YER127W BSC2Q05611 235 aa10.05□□□□□ -0.8
LCP5YER127W STB3Q12427 513 aa10.05□□□□□ -0.8
LCP5YER127W DAK2P43550 591 aa10.04□□□□□ -0.8
LCP5YER127W NOC3Q07896 663 aaPredicted RBP10.04□□□□□ -0.8
LCP5YER127W TY1A-BLQ12266 440 aa10.04□□□□□ -0.8
LCP5YER127W PAM1P37304 830 aaKnown RBP10.03□□□□□ -0.8
LCP5YER127W AIM46P38885 310 aa10.03□□□□□ -0.8
LCP5YER127W VPS35P34110 944 aa10.02□□□□□ -0.81
LCP5YER127W MET10P39692 1035 aa10.02□□□□□ -0.81
LCP5YER127W YJR107WP47145 328 aa10.02□□□□□ -0.81
LCP5YER127W SKP1P52286 194 aa10.02□□□□□ -0.81
LCP5YER127W MET22P32179 357 aa10.01□□□□□ -0.81
LCP5YER127W APM2P38700 605 aa10.01□□□□□ -0.81
LCP5YER127W NAM8Q00539 523 aaKnown RBP10.01□□□□□ -0.81
LCP5YER127W YDR444WQ04093 687 aa10.01□□□□□ -0.81
LCP5YER127W CIC1P38779 376 aaKnown RBP10□□□□□ -0.81
LCP5YER127W OXR1Q08952 273 aa10□□□□□ -0.81
LCP5YER127W MET1P36150 593 aa9.99□□□□□ -0.81
LCP5YER127W ITC1P53125 1264 aa9.99□□□□□ -0.81
LCP5YER127W YNR040WP53736 256 aa9.99□□□□□ -0.81
LCP5YER127W LCB5Q06147 687 aaKnown RBP9.99□□□□□ -0.81
LCP5YER127W EMG1Q06287 252 aaKnown RBP9.99□□□□□ -0.81
LCP5YER127W INP54Q08227 384 aaKnown RBP9.99□□□□□ -0.81
LCP5YER127W MCM2P29469 868 aa9.98□□□□□ -0.81
LCP5YER127W NCL1P38205 684 aaKnown RBP9.98□□□□□ -0.81
LCP5YER127W YHL008CP38750 627 aa9.98□□□□□ -0.81
LCP5YER127W ECM2P38241 364 aaKnown RBP9.97□□□□□ -0.81
LCP5YER127W YIL165CP40446 119 aa9.97□□□□□ -0.81
LCP5YER127W RPP1AP05318 106 aaPredicted RBP9.96□□□□□ -0.82
LCP5YER127W YMR265CQ03508 461 aaKnown RBP9.96□□□□□ -0.82
LCP5YER127W FYV10P40492 516 aa9.94□□□□□ -0.82
LCP5YER127W ROG3P43602 733 aa9.94□□□□□ -0.82
LCP5YER127W TY1A-MR1Q04215 440 aa9.93□□□□□ -0.82
LCP5YER127W DIT1P21623 536 aa9.92□□□□□ -0.82
LCP5YER127W PEP7P32609 515 aa9.92□□□□□ -0.82
LCP5YER127W RPS26AP39938 119 aaKnown RBP9.92□□□□□ -0.82
LCP5YER127W RPS26BP39939 119 aaKnown RBP9.92□□□□□ -0.82
LCP5YER127W CUZ1P53899 274 aa9.92□□□□□ -0.82
LCP5YER127W KRE33P53914 1056 aaKnown RBP9.92□□□□□ -0.82
LCP5YER127W SPR28Q04921 423 aa9.92□□□□□ -0.82
LCP5YER127W FLP1P03870 423 aa9.91□□□□□ -0.82
LCP5YER127W DAL4Q04895 635 aa9.91□□□□□ -0.82
LCP5YER127W YCS4Q06156 1176 aa9.9□□□□□ -0.82
LCP5YER127W FPS1P23900 669 aa9.89□□□□□ -0.83
LCP5YER127W PYC2P32327 1180 aaKnown RBP9.89□□□□□ -0.83
LCP5YER127W CTR9P89105 1077 aa9.89□□□□□ -0.83
LCP5YER127W SVF1Q05515 481 aa9.89□□□□□ -0.83
LCP5YER127W JIP5Q06214 492 aaPredicted RBP9.89□□□□□ -0.83
LCP5YER127W TOS4Q06266 489 aa9.89□□□□□ -0.83
LCP5YER127W ADE12P80210 433 aaKnown RBP9.88□□□□□ -0.83
LCP5YER127W HEH2Q03281 663 aa9.88□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 614.2 ms