RNA–Protein interactions for RNA: YDR414C

ERD1, Transcript of Predicted membrane protein required for lumenal ER protein retention, yeastyeast

Gene ERD1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERD1YDR414C HST2P53686 357 aa6.56□□□□□ -1.36
ERD1YDR414C KTR1P27810 393 aaKnown RBP6.55□□□□□ -1.36
ERD1YDR414C GRX4P32642 244 aa6.55□□□□□ -1.36
ERD1YDR414C RPL34BP40525 121 aaKnown RBP6.55□□□□□ -1.36
ERD1YDR414C KAR2P16474 682 aaKnown RBP6.54□□□□□ -1.36
ERD1YDR414C SSA4P22202 642 aaKnown RBP6.54□□□□□ -1.36
ERD1YDR414C UGA3P26370 528 aa6.54□□□□□ -1.36
ERD1YDR414C TPD3P31383 635 aa6.54□□□□□ -1.36
ERD1YDR414C YBL036CP38197 257 aa6.54□□□□□ -1.36
ERD1YDR414C RTF1P53064 558 aa6.54□□□□□ -1.36
ERD1YDR414C YDL144CQ07589 356 aa6.54□□□□□ -1.36
ERD1YDR414C ADE6P38972 1358 aaKnown RBP6.54□□□□□ -1.36
ERD1YDR414C GEF1P37020 779 aa6.53□□□□□ -1.36
ERD1YDR414C PRP43P53131 767 aaKnown RBP6.53□□□□□ -1.36
ERD1YDR414C SCW11P53189 542 aa6.53□□□□□ -1.36
ERD1YDR414C SYH1Q02875 849 aaKnown RBP6.53□□□□□ -1.36
ERD1YDR414C SUB2Q07478 446 aaKnown RBP6.53□□□□□ -1.36
ERD1YDR414C YPR204WQ08995 1032 aa6.53□□□□□ -1.36
ERD1YDR414C PUS1Q12211 544 aaKnown RBP6.53□□□□□ -1.36
ERD1YDR414C TY1A-BLQ12266 440 aa6.53□□□□□ -1.36
ERD1YDR414C ATG32P40458 529 aa6.52□□□□□ -1.37
ERD1YDR414C FPK1P53739 893 aa6.52□□□□□ -1.37
ERD1YDR414C NIS1P53939 407 aa6.52□□□□□ -1.37
ERD1YDR414C MMP1Q12372 583 aa6.52□□□□□ -1.37
ERD1YDR414C SRF1Q12516 437 aa6.52□□□□□ -1.37
ERD1YDR414C RTR1P40084 226 aaPredicted RBP6.51□□□□□ -1.37
ERD1YDR414C NUP85P46673 744 aa6.51□□□□□ -1.37
ERD1YDR414C TYW1Q08960 810 aaKnown RBP6.51□□□□□ -1.37
ERD1YDR414C AUS1Q08409 1394 aa6.51□□□□□ -1.37
ERD1YDR414C TY4B-HP0C2J7 1802 aa6.5□□□□□ -1.37
ERD1YDR414C TY4B-JP47024 1803 aa6.5□□□□□ -1.37
ERD1YDR414C RRP46P53256 223 aaPredicted RBP6.5□□□□□ -1.37
ERD1YDR414C RVB2Q12464 471 aaKnown RBP6.5□□□□□ -1.37
ERD1YDR414C APC1P53886 1748 aa6.5□□□□□ -1.37
ERD1YDR414C RPO41P13433 1351 aaKnown RBP6.49□□□□□ -1.37
ERD1YDR414C TIF1P10081 395 aaKnown RBP6.49□□□□□ -1.37
ERD1YDR414C SIT4P20604 311 aa6.49□□□□□ -1.37
ERD1YDR414C MPP10P47083 593 aaKnown RBP6.49□□□□□ -1.37
ERD1YDR414C SPT5P27692 1063 aaKnown RBP6.48□□□□□ -1.37
ERD1YDR414C HIM1Q06674 414 aa6.48□□□□□ -1.37
ERD1YDR414C RAD59Q12223 238 aa6.48□□□□□ -1.37
ERD1YDR414C MIP1P15801 1254 aa6.47□□□□□ -1.37
ERD1YDR414C SUI2P20459 304 aaKnown RBP6.47□□□□□ -1.37
ERD1YDR414C HXT10P43581 546 aa6.47□□□□□ -1.37
ERD1YDR414C KXD1P53158 218 aa6.47□□□□□ -1.37
ERD1YDR414C NRD1P53617 575 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
ERD1YDR414C PAP2P53632 584 aaKnown RBP6.47□□□□□ -1.37
ERD1YDR414C PKH3Q03306 898 aaPredicted RBP6.47□□□□□ -1.37
ERD1YDR414C RPS24AP0CX31 135 aaKnown RBP6.46□□□□□ -1.38
ERD1YDR414C RPS24BP0CX32 135 aaKnown RBP6.46□□□□□ -1.38
ERD1YDR414C PRD1P25375 712 aa6.46□□□□□ -1.38
ERD1YDR414C SIS2P36024 562 aa6.46□□□□□ -1.38
ERD1YDR414C THI12P42883 340 aa6.46□□□□□ -1.38
ERD1YDR414C THI5P43534 340 aa6.46□□□□□ -1.38
ERD1YDR414C THI11P47183 340 aa6.46□□□□□ -1.38
ERD1YDR414C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
ERD1YDR414C THI13Q07748 340 aa6.46□□□□□ -1.38
ERD1YDR414C YRF1-2P40105 1681 aa6.45□□□□□ -1.38
ERD1YDR414C SLX8P40072 274 aa6.45□□□□□ -1.38
ERD1YDR414C ESS1P22696 170 aa6.44□□□□□ -1.38
ERD1YDR414C BIO2P32451 375 aa6.44□□□□□ -1.38
ERD1YDR414C RTG2P32608 588 aaKnown RBP6.44□□□□□ -1.38
ERD1YDR414C FPR3P38911 411 aaKnown RBP6.44□□□□□ -1.38
ERD1YDR414C SAP155P43612 1002 aa6.44□□□□□ -1.38
ERD1YDR414C YML020WQ03722 664 aa6.44□□□□□ -1.38
ERD1YDR414C THI22Q06490 572 aa6.44□□□□□ -1.38
ERD1YDR414C NOP8Q08287 484 aaPredicted RBP6.44□□□□□ -1.38
ERD1YDR414C PHM7Q12252 991 aa6.44□□□□□ -1.38
ERD1YDR414C YIL177CP40434 1758 aa6.44□□□□□ -1.38
ERD1YDR414C YJL225CP40889 1758 aa6.44□□□□□ -1.38
ERD1YDR414C SIR4P11978 1358 aa6.44□□□□□ -1.38
ERD1YDR414C PDC1P06169 563 aaKnown RBP6.43□□□□□ -1.38
ERD1YDR414C ARG8P18544 423 aa6.43□□□□□ -1.38
ERD1YDR414C YNL115CP53925 644 aa6.43□□□□□ -1.38
ERD1YDR414C GAS4Q08271 471 aa6.43□□□□□ -1.38
ERD1YDR414C RRP5Q05022 1729 aaKnown RBP6.42□□□□□ -1.38
ERD1YDR414C FKS3Q04952 1785 aa6.42□□□□□ -1.38
ERD1YDR414C SUP45P12385 437 aaKnown RBP6.42□□□□□ -1.38
ERD1YDR414C TTI1P36097 1038 aa6.42□□□□□ -1.38
ERD1YDR414C HEF3P53978 1044 aaKnown RBP6.42□□□□□ -1.38
ERD1YDR414C DPH6Q12429 685 aa6.42□□□□□ -1.38
ERD1YDR414C RAD2P07276 1031 aa6.41□□□□□ -1.38
ERD1YDR414C SCJ1P25303 377 aa6.41□□□□□ -1.38
ERD1YDR414C MRT4P33201 236 aaKnown RBP6.41□□□□□ -1.38
ERD1YDR414C AKL1P38080 1108 aaKnown RBP6.41□□□□□ -1.38
ERD1YDR414C BUD27P43573 796 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
ERD1YDR414C YRF1-4O13559 1382 aa6.41□□□□□ -1.38
ERD1YDR414C URB1P34241 1764 aaKnown RBP6.41□□□□□ -1.38
ERD1YDR414C YJU3P28321 313 aa6.4□□□□□ -1.38
ERD1YDR414C FUN12P39730 1002 aaKnown RBP6.4□□□□□ -1.38
ERD1YDR414C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
ERD1YDR414C YFR016CP43597 1233 aaKnown RBP6.4□□□□□ -1.38
ERD1YDR414C YNL108CP53929 270 aa6.4□□□□□ -1.38
ERD1YDR414C MAK16P10962 306 aaPredicted RBP6.39□□□□□ -1.39
ERD1YDR414C SLY41P22215 453 aa6.39□□□□□ -1.39
ERD1YDR414C RSC30P38781 883 aa6.39□□□□□ -1.39
ERD1YDR414C YPP1P46951 817 aa6.39□□□□□ -1.39
ERD1YDR414C DSD1P53095 428 aa6.39□□□□□ -1.39
ERD1YDR414C YNL050CP53952 270 aa6.39□□□□□ -1.39
ERD1YDR414C RPL34AP87262 121 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms