RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C YJR107WP47145 328 aa5.68□□□□□ -1.5
CNL1YDR357C YJR115WP47152 169 aa5.68□□□□□ -1.5
CNL1YDR357C YJR142WP47173 342 aa5.68□□□□□ -1.5
CNL1YDR357C ITC1P53125 1264 aa5.68□□□□□ -1.5
CNL1YDR357C ALD6P54115 500 aaKnown RBP5.68□□□□□ -1.5
CNL1YDR357C KAR5Q04746 504 aa5.68□□□□□ -1.5
CNL1YDR357C CDC53Q12018 815 aaKnown RBP5.68□□□□□ -1.5
CNL1YDR357C ENO1P00924 437 aaKnown RBP5.67□□□□□ -1.5
CNL1YDR357C SUP45P12385 437 aaKnown RBP5.67□□□□□ -1.5
CNL1YDR357C NFU1P32860 256 aa5.67□□□□□ -1.5
CNL1YDR357C TFC3P34111 1160 aa5.67□□□□□ -1.5
CNL1YDR357C GRS1P38088 690 aaKnown RBP5.67□□□□□ -1.5
CNL1YDR357C PBP2P38151 413 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
CNL1YDR357C ENP1P38333 483 aaKnown RBP5.67□□□□□ -1.5
CNL1YDR357C BUD6P41697 788 aa5.67□□□□□ -1.5
CNL1YDR357C TRM1P15565 570 aaKnown RBP5.66□□□□□ -1.5
CNL1YDR357C MET1P36150 593 aa5.66□□□□□ -1.5
CNL1YDR357C MAL31P38156 614 aa5.66□□□□□ -1.5
CNL1YDR357C KXD1P53158 218 aa5.66□□□□□ -1.5
CNL1YDR357C CAF120P53836 1060 aa5.66□□□□□ -1.5
CNL1YDR357C SYH1Q02875 849 aaKnown RBP5.66□□□□□ -1.5
CNL1YDR357C WHI5Q12416 295 aa5.66□□□□□ -1.5
CNL1YDR357C TRL1P09880 827 aaKnown RBP5.65□□□□□ -1.5
CNL1YDR357C MRC1P25588 1096 aa5.65□□□□□ -1.5
CNL1YDR357C MDJ2P42834 146 aa5.65□□□□□ -1.5
CNL1YDR357C DAK2P43550 591 aa5.65□□□□□ -1.5
CNL1YDR357C EMP47P43555 445 aa5.65□□□□□ -1.5
CNL1YDR357C HST2P53686 357 aa5.65□□□□□ -1.5
CNL1YDR357C MNL2Q12205 849 aa5.65□□□□□ -1.5
CNL1YDR357C CLN2P20438 545 aa5.64□□□□□ -1.51
CNL1YDR357C MUM2P38236 366 aa5.64□□□□□ -1.51
CNL1YDR357C MDM1Q01846 1127 aa5.64□□□□□ -1.51
CNL1YDR357C SVL3Q03088 825 aaKnown RBP5.64□□□□□ -1.51
CNL1YDR357C MRX10Q05648 414 aa5.64□□□□□ -1.51
CNL1YDR357C PUS1Q12211 544 aaKnown RBP5.64□□□□□ -1.51
CNL1YDR357C MMP1Q12372 583 aa5.64□□□□□ -1.51
CNL1YDR357C SNU66Q12420 587 aaPredicted RBP5.64□□□□□ -1.51
CNL1YDR357C YDL206WQ12424 762 aa5.64□□□□□ -1.51
CNL1YDR357C SWI3P32591 825 aa5.63□□□□□ -1.51
CNL1YDR357C GLO3P38682 493 aaKnown RBP5.63□□□□□ -1.51
CNL1YDR357C ATG1P53104 897 aa5.63□□□□□ -1.51
CNL1YDR357C YGR021WP53212 290 aa5.63□□□□□ -1.51
CNL1YDR357C ECM23Q02710 187 aa5.63□□□□□ -1.51
CNL1YDR357C ATG16Q03818 150 aa5.63□□□□□ -1.51
CNL1YDR357C SPO20Q04359 397 aa5.63□□□□□ -1.51
CNL1YDR357C PIN2Q12057 282 aa5.63□□□□□ -1.51
CNL1YDR357C ENO2P00925 437 aaKnown RBP5.62□□□□□ -1.51
CNL1YDR357C RAD27P26793 382 aa5.62□□□□□ -1.51
CNL1YDR357C SPT5P27692 1063 aaKnown RBP5.62□□□□□ -1.51
CNL1YDR357C JNM1P36224 373 aa5.62□□□□□ -1.51
CNL1YDR357C CRP1P38845 465 aaKnown RBP5.62□□□□□ -1.51
CNL1YDR357C NMD3P38861 518 aaKnown RBP5.62□□□□□ -1.51
CNL1YDR357C ACO2P39533 789 aa5.62□□□□□ -1.51
CNL1YDR357C FOL1P53848 824 aa5.62□□□□□ -1.51
CNL1YDR357C VPS16Q03308 798 aa5.62□□□□□ -1.51
CNL1YDR357C HSC82P15108 705 aaKnown RBP5.61□□□□□ -1.51
CNL1YDR357C TRK2P28584 889 aa5.61□□□□□ -1.51
CNL1YDR357C FAF1P40546 346 aaPredicted RBP5.61□□□□□ -1.51
CNL1YDR357C RPA14P50106 137 aa5.61□□□□□ -1.51
CNL1YDR357C BDF2Q07442 638 aa5.61□□□□□ -1.51
CNL1YDR357C SPT2P06843 333 aaPredicted RBP5.6□□□□□ -1.51
CNL1YDR357C SRM1P21827 482 aa5.6□□□□□ -1.51
CNL1YDR357C YDJ1P25491 409 aaKnown RBP5.6□□□□□ -1.51
CNL1YDR357C MTC2P34246 357 aa5.6□□□□□ -1.51
CNL1YDR357C PAF1P38351 445 aa5.6□□□□□ -1.51
CNL1YDR357C MSB3P48566 633 aaPredicted RBP5.6□□□□□ -1.51
CNL1YDR357C IMH1Q06704 911 aaKnown RBP5.6□□□□□ -1.51
CNL1YDR357C SLX4Q12098 748 aa5.6□□□□□ -1.51
CNL1YDR357C RAD59Q12223 238 aa5.6□□□□□ -1.51
CNL1YDR357C SWR1Q05471 1514 aa5.59□□□□□ -1.51
CNL1YDR357C RAD4P14736 754 aa5.59□□□□□ -1.51
CNL1YDR357C RSC30P38781 883 aa5.59□□□□□ -1.51
CNL1YDR357C NUP82P40368 713 aa5.59□□□□□ -1.51
CNL1YDR357C DAS1P47005 663 aa5.59□□□□□ -1.51
CNL1YDR357C PEX8P53248 589 aa5.59□□□□□ -1.51
CNL1YDR357C PUS6P53294 404 aa5.59□□□□□ -1.51
CNL1YDR357C PKH3Q03306 898 aaPredicted RBP5.59□□□□□ -1.51
CNL1YDR357C YPR097WQ06839 1073 aa5.59□□□□□ -1.51
CNL1YDR357C YOR378WQ08902 515 aa5.59□□□□□ -1.51
CNL1YDR357C PLP2Q12017 286 aa5.59□□□□□ -1.51
CNL1YDR357C INH1P01097 85 aa5.58□□□□□ -1.52
CNL1YDR357C UBX7P38349 436 aa5.58□□□□□ -1.52
CNL1YDR357C VID27P40157 782 aa5.58□□□□□ -1.52
CNL1YDR357C RIM21P48565 533 aa5.58□□□□□ -1.52
CNL1YDR357C HOS2P53096 452 aaPredicted RBP5.58□□□□□ -1.52
CNL1YDR357C RMD1Q03441 430 aa5.58□□□□□ -1.52
CNL1YDR357C ESF1Q06344 628 aaKnown RBP5.58□□□□□ -1.52
CNL1YDR357C ALR1Q08269 859 aa5.58□□□□□ -1.52
CNL1YDR357C NYV1Q12255 253 aa5.58□□□□□ -1.52
CNL1YDR357C HSE1P38753 452 aa5.57□□□□□ -1.52
CNL1YDR357C SNF7P39929 240 aaKnown RBP5.57□□□□□ -1.52
CNL1YDR357C CWC15Q03772 175 aaKnown RBP5.57□□□□□ -1.52
CNL1YDR357C SXM1Q04175 944 aaKnown RBP5.57□□□□□ -1.52
CNL1YDR357C TMA7Q3E764 64 aaKnown RBP5.57□□□□□ -1.52
CNL1YDR357C FOB1O13329 566 aa5.56□□□□□ -1.52
CNL1YDR357C ATP4P05626 244 aa5.56□□□□□ -1.52
CNL1YDR357C PHO8P11491 566 aa5.56□□□□□ -1.52
CNL1YDR357C MET4P32389 672 aa5.56□□□□□ -1.52
CNL1YDR357C PEP12P32854 288 aa5.56□□□□□ -1.52
CNL1YDR357C MRT4P33201 236 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms