RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	Q0182	Q9ZZW1	134 aa		4.05	□□□□□ -1.76
CSN9	YDR179C	MLF3	P32047	452 aa		4.04	□□□□□ -1.76
CSN9	YDR179C	ALD2	P47771	506 aa		4.04	□□□□□ -1.76
CSN9	YDR179C	ACS2	P52910	683 aa	Known RBP	4.04	□□□□□ -1.76
CSN9	YDR179C	NCL1	P38205	684 aa	Known RBP	4.03	□□□□□ -1.76
CSN9	YDR179C	MSC7	P38694	644 aa		4.03	□□□□□ -1.76
CSN9	YDR179C	CWH41	P53008	833 aa		4.03	□□□□□ -1.76
CSN9	YDR179C	YNL165W	P53891	406 aa		4.03	□□□□□ -1.76
CSN9	YDR179C	GAL2	P13181	574 aa		4.02	□□□□□ -1.77
CSN9	YDR179C	VAN1	P23642	535 aa		4.02	□□□□□ -1.77
CSN9	YDR179C	NGR1	P32831	672 aa	Known RBP	4.02	□□□□□ -1.77
CSN9	YDR179C	YKR073C	P36153	106 aa		4.02	□□□□□ -1.77
CSN9	YDR179C	TPS3	P38426	1054 aa	Known RBP	4.02	□□□□□ -1.77
CSN9	YDR179C	CTH1	P47976	325 aa		4.02	□□□□□ -1.77
CSN9	YDR179C	SKP1	P52286	194 aa		4.02	□□□□□ -1.77
CSN9	YDR179C	MTO1	P53070	669 aa		4.02	□□□□□ -1.77
CSN9	YDR179C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
CSN9	YDR179C	KAP122	P32767	1081 aa		4.01	□□□□□ -1.77
CSN9	YDR179C	KTR7	P40504	517 aa		4.01	□□□□□ -1.77
CSN9	YDR179C	NHA1	Q99271	985 aa		4.01	□□□□□ -1.77
CSN9	YDR179C	TRS33	Q99394	268 aa		4.01	□□□□□ -1.77
CSN9	YDR179C	TRP3	P00937	484 aa		4	□□□□□ -1.77
CSN9	YDR179C	APM2	P38700	605 aa		4	□□□□□ -1.77
CSN9	YDR179C	HXT5	P38695	592 aa		3.99	□□□□□ -1.77
CSN9	YDR179C	ROM1	P53046	1155 aa		3.98	□□□□□ -1.77
CSN9	YDR179C	CUS1	Q02554	436 aa	Predicted RBP	3.98	□□□□□ -1.77
CSN9	YDR179C	RPC31	P17890	251 aa		3.97	□□□□□ -1.77
CSN9	YDR179C	TGL4	P36165	910 aa		3.97	□□□□□ -1.77
CSN9	YDR179C	ALG14	P38242	237 aa		3.97	□□□□□ -1.77
CSN9	YDR179C	AI3	P03877	415 aa		3.96	□□□□□ -1.78
CSN9	YDR179C	PGM2	P37012	569 aa	Known RBP	3.96	□□□□□ -1.78
CSN9	YDR179C	UBP5	P39944	805 aa		3.96	□□□□□ -1.78
CSN9	YDR179C	PRK1	P40494	810 aa		3.96	□□□□□ -1.78
CSN9	YDR179C	SLP1	Q12232	587 aa		3.96	□□□□□ -1.78
CSN9	YDR179C	TTI1	P36097	1038 aa		3.95	□□□□□ -1.78
CSN9	YDR179C	YBR287W	P38355	427 aa		3.95	□□□□□ -1.78
CSN9	YDR179C	DYS1	P38791	387 aa		3.95	□□□□□ -1.78
CSN9	YDR179C	QDR2	P40474	542 aa		3.95	□□□□□ -1.78
CSN9	YDR179C	GIS4	Q04233	774 aa		3.95	□□□□□ -1.78
CSN9	YDR179C	PUF6	Q04373	656 aa	Known RBP	3.95	□□□□□ -1.78
CSN9	YDR179C	YER156C	P40093	338 aa	Known RBP	3.94	□□□□□ -1.78
CSN9	YDR179C	ECM23	Q02710	187 aa		3.94	□□□□□ -1.78
CSN9	YDR179C	RSC2	Q06488	889 aa		3.94	□□□□□ -1.78
CSN9	YDR179C	GAS5	Q08193	484 aa		3.94	□□□□□ -1.78
CSN9	YDR179C	MED7	Q08278	222 aa		3.94	□□□□□ -1.78
CSN9	YDR179C	MRPL33	P20084	86 aa		3.93	□□□□□ -1.78
CSN9	YDR179C	NAR1	P23503	491 aa	Known RBP	3.93	□□□□□ -1.78
CSN9	YDR179C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
CSN9	YDR179C	CAB1	Q04430	367 aa		3.93	□□□□□ -1.78
CSN9	YDR179C	YOR296W	Q08748	1289 aa		3.93	□□□□□ -1.78
CSN9	YDR179C	SFA1	P32771	386 aa		3.92	□□□□□ -1.78
CSN9	YDR179C	LDH1	P38139	375 aa		3.92	□□□□□ -1.78
CSN9	YDR179C	GIP1	P38229	639 aa		3.92	□□□□□ -1.78
CSN9	YDR179C	UBX7	P38349	436 aa		3.92	□□□□□ -1.78
CSN9	YDR179C	DMA2	P53924	522 aa		3.92	□□□□□ -1.78
CSN9	YDR179C	SAC7	P17121	654 aa		3.91	□□□□□ -1.78
CSN9	YDR179C	VMA3	P25515	160 aa		3.91	□□□□□ -1.78
CSN9	YDR179C	YCR015C	P25616	317 aa		3.91	□□□□□ -1.78
CSN9	YDR179C	ISW1	P38144	1129 aa		3.91	□□□□□ -1.78
CSN9	YDR179C	YNR040W	P53736	256 aa		3.91	□□□□□ -1.78
CSN9	YDR179C	IDI1	P15496	288 aa		3.9	□□□□□ -1.79
CSN9	YDR179C	SSA4	P22202	642 aa	Known RBP	3.9	□□□□□ -1.79
CSN9	YDR179C	RNQ1	P25367	405 aa		3.9	□□□□□ -1.79
CSN9	YDR179C	SUV3	P32580	737 aa		3.9	□□□□□ -1.79
CSN9	YDR179C	LIP5	P32875	414 aa		3.9	□□□□□ -1.79
CSN9	YDR179C	YBR197C	P38306	217 aa		3.9	□□□□□ -1.79
CSN9	YDR179C	ITC1	P53125	1264 aa		3.9	□□□□□ -1.79
CSN9	YDR179C	FOX2	Q02207	900 aa	Known RBP	3.9	□□□□□ -1.79
CSN9	YDR179C	SRS2	P12954	1174 aa		3.89	□□□□□ -1.79
CSN9	YDR179C	TOS1	P38288	455 aa		3.89	□□□□□ -1.79
CSN9	YDR179C	RRM3	P38766	723 aa		3.89	□□□□□ -1.79
CSN9	YDR179C	ALD4	P46367	519 aa	Known RBP	3.89	□□□□□ -1.79
CSN9	YDR179C	ARI1	P53111	347 aa	Known RBP	3.89	□□□□□ -1.79
CSN9	YDR179C	PUN1	Q06991	263 aa		3.89	□□□□□ -1.79
CSN9	YDR179C	YLR122C	Q12312	125 aa		3.89	□□□□□ -1.79
CSN9	YDR179C	PUP1	P25043	261 aa		3.88	□□□□□ -1.79
CSN9	YDR179C	RSC6	P25632	483 aa		3.88	□□□□□ -1.79
CSN9	YDR179C	CPS1	P27614	576 aa		3.88	□□□□□ -1.79
CSN9	YDR179C	FIR1	P40020	876 aa		3.88	□□□□□ -1.79
CSN9	YDR179C	LEM3	P42838	414 aa		3.88	□□□□□ -1.79
CSN9	YDR179C	BRE4	Q07660	1125 aa		3.88	□□□□□ -1.79
CSN9	YDR179C	COQ2	P32378	372 aa		3.87	□□□□□ -1.79
CSN9	YDR179C	ISC10	P32645	267 aa		3.87	□□□□□ -1.79
CSN9	YDR179C	DSE4	P53753	1117 aa		3.87	□□□□□ -1.79
CSN9	YDR179C	RRN6	P32786	894 aa		3.86	□□□□□ -1.79
CSN9	YDR179C	KAE1	P36132	386 aa		3.86	□□□□□ -1.79
CSN9	YDR179C	YIL165C	P40446	119 aa		3.86	□□□□□ -1.79
CSN9	YDR179C	TY4B-P	A0A0B7P3V8	1104 aa		3.85	□□□□□ -1.79
CSN9	YDR179C	BSD2	P38356	321 aa		3.85	□□□□□ -1.79
CSN9	YDR179C	GIP2	P40036	548 aa		3.85	□□□□□ -1.79
CSN9	YDR179C	PPT1	P53043	513 aa		3.85	□□□□□ -1.79
CSN9	YDR179C	GUP1	P53154	560 aa		3.85	□□□□□ -1.79
CSN9	YDR179C	TY4A-H	Q6Q5P6	413 aa		3.85	□□□□□ -1.79
CSN9	YDR179C	MSN1	P22148	382 aa		3.84	□□□□□ -1.79
CSN9	YDR179C	HXT8	P40886	569 aa		3.84	□□□□□ -1.79
CSN9	YDR179C	CWC15	Q03772	175 aa	Known RBP	3.84	□□□□□ -1.79
CSN9	YDR179C	MAG2	Q06436	670 aa	Known RBP	3.84	□□□□□ -1.79
CSN9	YDR179C	MRP10	O75012	95 aa		3.83	□□□□□ -1.8
CSN9	YDR179C	AIM46	P38885	310 aa		3.83	□□□□□ -1.8
CSN9	YDR179C	INP51	P40559	946 aa	Known RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms