RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C YJL181WP46987 611 aa7.49□□□□□ -1.21
CDC34YDR054C POL32P47110 350 aa7.49□□□□□ -1.21
CDC34YDR054C YDR306CQ06640 478 aa7.49□□□□□ -1.21
CDC34YDR054C MSC6Q08818 692 aaKnown RBP7.49□□□□□ -1.21
CDC34YDR054C ENO2P00925 437 aaKnown RBP7.48□□□□□ -1.21
CDC34YDR054C MRP7P12687 371 aa7.48□□□□□ -1.21
CDC34YDR054C SPT5P27692 1063 aaKnown RBP7.48□□□□□ -1.21
CDC34YDR054C SWC3P31376 625 aa7.48□□□□□ -1.21
CDC34YDR054C YJR008WP47085 338 aa7.48□□□□□ -1.21
CDC34YDR054C LYS4P49367 693 aaPredicted RBP7.48□□□□□ -1.21
CDC34YDR054C VPS64Q03944 604 aa7.48□□□□□ -1.21
CDC34YDR054C HST2P53686 357 aa7.47□□□□□ -1.21
CDC34YDR054C GRE2Q12068 342 aaKnown RBP7.47□□□□□ -1.21
CDC34YDR054C SWI1P09547 1314 aa7.47□□□□□ -1.21
CDC34YDR054C ARG8P18544 423 aa7.46□□□□□ -1.22
CDC34YDR054C UBP1P25037 809 aa7.46□□□□□ -1.22
CDC34YDR054C ERP5P38819 212 aa7.46□□□□□ -1.22
CDC34YDR054C ORC6P38826 435 aa7.46□□□□□ -1.22
CDC34YDR054C ATG36P46983 293 aa7.46□□□□□ -1.22
CDC34YDR054C ATH1P48016 1211 aa7.46□□□□□ -1.22
CDC34YDR054C PUF6Q04373 656 aaKnown RBP7.46□□□□□ -1.22
CDC34YDR054C MRX10Q05648 414 aa7.46□□□□□ -1.22
CDC34YDR054C RRP15Q06511 250 aaPredicted RBP7.46□□□□□ -1.22
CDC34YDR054C MSB4Q12317 492 aa7.46□□□□□ -1.22
CDC34YDR054C MMP1Q12372 583 aa7.46□□□□□ -1.22
CDC34YDR054C NUP133P36161 1157 aa7.45□□□□□ -1.22
CDC34YDR054C VPS72Q03388 795 aa7.45□□□□□ -1.22
CDC34YDR054C SSP2Q08646 371 aa7.45□□□□□ -1.22
CDC34YDR054C PCS60P38137 543 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
CDC34YDR054C FPR3P38911 411 aaKnown RBP7.44□□□□□ -1.22
CDC34YDR054C TGL3P40308 642 aa7.44□□□□□ -1.22
CDC34YDR054C CTH1P47976 325 aa7.44□□□□□ -1.22
CDC34YDR054C SPO1P53541 631 aa7.44□□□□□ -1.22
CDC34YDR054C DNM1P54861 757 aa7.44□□□□□ -1.22
CDC34YDR054C PHM7Q12252 991 aa7.44□□□□□ -1.22
CDC34YDR054C RPS19AP07280 144 aaKnown RBP7.43□□□□□ -1.22
CDC34YDR054C RPS19BP07281 144 aaPredicted RBP7.43□□□□□ -1.22
CDC34YDR054C ESS1P22696 170 aa7.43□□□□□ -1.22
CDC34YDR054C SER1P33330 395 aaKnown RBP7.43□□□□□ -1.22
CDC34YDR054C RRP14P36080 434 aaKnown RBP7.43□□□□□ -1.22
CDC34YDR054C YNG2P38806 282 aaKnown RBP7.43□□□□□ -1.22
CDC34YDR054C BOI2P39969 1040 aa7.43□□□□□ -1.22
CDC34YDR054C YFR016CP43597 1233 aaKnown RBP7.43□□□□□ -1.22
CDC34YDR054C RIM21P48565 533 aa7.43□□□□□ -1.22
CDC34YDR054C YGL082WP53155 381 aa7.43□□□□□ -1.22
CDC34YDR054C FPK1P53739 893 aa7.43□□□□□ -1.22
CDC34YDR054C KAR5Q04746 504 aa7.43□□□□□ -1.22
CDC34YDR054C NYV1Q12255 253 aa7.43□□□□□ -1.22
CDC34YDR054C YOL098CQ12496 1037 aa7.43□□□□□ -1.22
CDC34YDR054C YDJ1P25491 409 aaKnown RBP7.42□□□□□ -1.22
CDC34YDR054C SWE1P32944 819 aa7.42□□□□□ -1.22
CDC34YDR054C YHL050CP38721 697 aa7.42□□□□□ -1.22
CDC34YDR054C YHR219WP38900 624 aa7.42□□□□□ -1.22
CDC34YDR054C RNH70P53331 553 aa7.42□□□□□ -1.22
CDC34YDR054C NIS1P53939 407 aa7.42□□□□□ -1.22
CDC34YDR054C ECM23Q02710 187 aa7.42□□□□□ -1.22
CDC34YDR054C YOR238WQ08634 303 aa7.42□□□□□ -1.22
CDC34YDR054C YEL077CQ3E7X8 1277 aa7.42□□□□□ -1.22
CDC34YDR054C LPD1P09624 499 aaKnown RBP7.41□□□□□ -1.22
CDC34YDR054C ATE1P16639 503 aa7.41□□□□□ -1.22
CDC34YDR054C TIF4632P39936 914 aaKnown RBP7.41□□□□□ -1.22
CDC34YDR054C YGR273CP53329 174 aa7.41□□□□□ -1.22
CDC34YDR054C MDG1P53885 366 aa7.41□□□□□ -1.22
CDC34YDR054C FCP1Q03254 732 aa7.41□□□□□ -1.22
CDC34YDR054C JIP5Q06214 492 aaPredicted RBP7.41□□□□□ -1.22
CDC34YDR054C BUG1Q12191 341 aa7.41□□□□□ -1.22
CDC34YDR054C RGR1P19263 1082 aa7.4□□□□□ -1.22
CDC34YDR054C GUT1P32190 709 aa7.4□□□□□ -1.22
CDC34YDR054C PPG1P32838 368 aa7.4□□□□□ -1.22
CDC34YDR054C GRS1P38088 690 aaKnown RBP7.4□□□□□ -1.22
CDC34YDR054C PPX1P38698 397 aa7.4□□□□□ -1.22
CDC34YDR054C OYE2Q03558 400 aaKnown RBP7.4□□□□□ -1.22
CDC34YDR054C MAK16P10962 306 aaPredicted RBP7.39□□□□□ -1.23
CDC34YDR054C YBL086CP38177 466 aa7.39□□□□□ -1.23
CDC34YDR054C HXT10P43581 546 aa7.39□□□□□ -1.23
CDC34YDR054C PKH1Q03407 766 aa7.39□□□□□ -1.23
CDC34YDR054C SCJ1P25303 377 aa7.38□□□□□ -1.23
CDC34YDR054C YJU3P28321 313 aa7.38□□□□□ -1.23
CDC34YDR054C MGE1P38523 228 aa7.38□□□□□ -1.23
CDC34YDR054C UBP12P39538 1254 aa7.38□□□□□ -1.23
CDC34YDR054C CTI6Q08923 506 aa7.38□□□□□ -1.23
CDC34YDR054C GCD7P32502 381 aaPredicted RBP7.37□□□□□ -1.23
CDC34YDR054C SEC8P32855 1065 aa7.37□□□□□ -1.23
CDC34YDR054C UBX7P38349 436 aa7.37□□□□□ -1.23
CDC34YDR054C KTR7P40504 517 aa7.37□□□□□ -1.23
CDC34YDR054C RIX7Q07844 837 aaKnown RBP7.37□□□□□ -1.23
CDC34YDR054C RIM15P43565 1770 aa7.37□□□□□ -1.23
CDC34YDR054C PEP12P32854 288 aa7.36□□□□□ -1.23
CDC34YDR054C TOM20P35180 183 aa7.36□□□□□ -1.23
CDC34YDR054C OSW7P43611 510 aa7.36□□□□□ -1.23
CDC34YDR054C ITC1P53125 1264 aa7.36□□□□□ -1.23
CDC34YDR054C RPC31P17890 251 aa7.35□□□□□ -1.23
CDC34YDR054C SLA1P32790 1244 aa7.35□□□□□ -1.23
CDC34YDR054C UTP22P53254 1237 aaPredicted RBP7.35□□□□□ -1.23
CDC34YDR054C UBX5Q06682 500 aa7.35□□□□□ -1.23
CDC34YDR054C PSH1Q12161 406 aa7.35□□□□□ -1.23
CDC34YDR054C WHI5Q12416 295 aa7.35□□□□□ -1.23
CDC34YDR054C TRL1P09880 827 aaKnown RBP7.34□□□□□ -1.23
CDC34YDR054C SRP40P32583 406 aaPredicted RBP7.34□□□□□ -1.23
CDC34YDR054C TOS1P38288 455 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms