RNA–Protein interactions for RNA: YDL117W

CYK3, Transcript of SH3-domain protein located in the bud neck and cytokinetic actin ring, yeast

Gene CYK3, Length 2,658 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CYK3	YDL117W	ILV3	P39522	585 aa	Known RBP	5.74	□□□□□ -1.49
CYK3	YDL117W	HGH1	P48362	394 aa	Known RBP	5.74	□□□□□ -1.49
CYK3	YDL117W	SMD2	Q06217	110 aa	Known RBP	5.74	□□□□□ -1.49
CYK3	YDL117W	PMT7	Q06644	662 aa		5.74	□□□□□ -1.49
CYK3	YDL117W	YPR097W	Q06839	1073 aa		5.74	□□□□□ -1.49
CYK3	YDL117W	YDL121C	Q07541	149 aa		5.74	□□□□□ -1.49
CYK3	YDL117W	CIR2	Q08822	631 aa		5.74	□□□□□ -1.49
CYK3	YDL117W	SEC15	P22224	910 aa		5.73	□□□□□ -1.49
CYK3	YDL117W	PHO84	P25297	587 aa	Known RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	CIC1	P38779	376 aa	Known RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
CYK3	YDL117W	SSQ1	Q05931	657 aa	Predicted RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	ERP4	Q12450	207 aa		5.73	□□□□□ -1.49
CYK3	YDL117W	PET494	P07390	489 aa	Predicted RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	VMA4	P22203	233 aa	Known RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	CDC48	P25694	835 aa	Known RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	DLD1	P32891	587 aa		5.73	□□□□□ -1.49
CYK3	YDL117W	NPL4	P33755	580 aa		5.73	□□□□□ -1.49
CYK3	YDL117W	SET2	P46995	733 aa	Known RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	SFI1	Q12369	946 aa		5.73	□□□□□ -1.49
CYK3	YDL117W	SNU66	Q12420	587 aa	Predicted RBP	5.73	□□□□□ -1.49
CYK3	YDL117W	TRM732	Q03496	1420 aa		5.73	□□□□□ -1.49
CYK3	YDL117W	RKM3	P38222	552 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	MET18	P40469	1032 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	ARP5	P53946	755 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	SEN54	Q02825	467 aa	Predicted RBP	5.72	□□□□□ -1.49
CYK3	YDL117W	TMA64	Q04600	565 aa	Known RBP	5.72	□□□□□ -1.49
CYK3	YDL117W	ITT1	Q04638	464 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	ARR2	Q06597	130 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
CYK3	YDL117W	TBS1	P38114	1094 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	ETP1	P38748	585 aa	Known RBP	5.72	□□□□□ -1.49
CYK3	YDL117W	VPS41	P38959	992 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	GPI8	P49018	411 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	PNG1	Q02890	363 aa		5.72	□□□□□ -1.49
CYK3	YDL117W	ESL2	P36168	1195 aa		5.71	□□□□□ -1.49
CYK3	YDL117W	GDT1	P38301	280 aa	Predicted RBP	5.71	□□□□□ -1.49
CYK3	YDL117W	GGA2	P38817	585 aa	Known RBP	5.71	□□□□□ -1.49
CYK3	YDL117W	SWD1	P39706	426 aa		5.71	□□□□□ -1.49
CYK3	YDL117W	YTA6	P40328	754 aa		5.71	□□□□□ -1.49
CYK3	YDL117W	ENP2	P48234	707 aa	Known RBP	5.71	□□□□□ -1.49
CYK3	YDL117W	ESF2	P53743	316 aa	Known RBP	5.71	□□□□□ -1.49
CYK3	YDL117W	SRP1	Q02821	542 aa	Known RBP	5.71	□□□□□ -1.49
CYK3	YDL117W	STE20	Q03497	939 aa	Known RBP	5.71	□□□□□ -1.49
CYK3	YDL117W	YDL073W	Q07454	984 aa		5.71	□□□□□ -1.49
CYK3	YDL117W	PDR10	P51533	1564 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	KEX1	P09620	729 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	NIP100	P33420	868 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	ATG19	P35193	415 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	SPC72	P39723	622 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	ARB1	P40024	610 aa	Known RBP	5.71	□□□□□ -1.5
CYK3	YDL117W	TEA1	P47988	759 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	RAD17	P48581	401 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	PSD2	P53037	1138 aa	Known RBP	5.71	□□□□□ -1.5
CYK3	YDL117W	INP2	Q03824	705 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	LCD1	Q04377	747 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	MPC54	Q08550	464 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	SSK22	P25390	1331 aa	Predicted RBP	5.71	□□□□□ -1.5
CYK3	YDL117W	REB1	P21538	810 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	PEP12	P32854	288 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	MAL31	P38156	614 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	UTP18	P40362	594 aa	Predicted RBP	5.71	□□□□□ -1.5
CYK3	YDL117W	KRE28	Q04431	385 aa		5.71	□□□□□ -1.5
CYK3	YDL117W	DNL4	Q08387	944 aa	Predicted RBP	5.71	□□□□□ -1.5
CYK3	YDL117W	CST6	P40535	587 aa		5.7	□□□□□ -1.5
CYK3	YDL117W	YFR006W	P43590	535 aa		5.7	□□□□□ -1.5
CYK3	YDL117W	SPO71	Q03868	1245 aa		5.7	□□□□□ -1.5
CYK3	YDL117W	FUS2	Q05670	677 aa		5.7	□□□□□ -1.5
CYK3	YDL117W	TSR3	Q12094	313 aa	Known RBP	5.7	□□□□□ -1.5
CYK3	YDL117W	HEM3	P28789	327 aa		5.7	□□□□□ -1.5
CYK3	YDL117W	YME2	P32843	850 aa		5.7	□□□□□ -1.5
CYK3	YDL117W	SWI1	P09547	1314 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	CDC37	P06101	506 aa	Known RBP	5.69	□□□□□ -1.5
CYK3	YDL117W	MRPS28	P21771	286 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
CYK3	YDL117W	MAD1	P40957	749 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	RIP-Chip
CYK3	YDL117W	PHM6	Q05637	104 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	YDL144C	Q07589	356 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	SLK19	Q08581	821 aa	Known RBP	5.69	□□□□□ -1.5
CYK3	YDL117W	YCF1	P39109	1515 aa	Known RBP	5.69	□□□□□ -1.5
CYK3	YDL117W	CYB2	P00175	591 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	MSH1	P25846	959 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	MRE11	P32829	692 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	PTH2	P34222	208 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	RTT106	P40161	455 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	IOC3	P43596	787 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	RTC4	P53850	401 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	MDM1	Q01846	1127 aa		5.69	□□□□□ -1.5
CYK3	YDL117W	STE11	P23561	717 aa		5.68	□□□□□ -1.5
CYK3	YDL117W	PAP1	P29468	568 aa	Known RBP	5.68	□□□□□ -1.5
CYK3	YDL117W	MCM2	P29469	868 aa		5.68	□□□□□ -1.5
CYK3	YDL117W	CSE1	P33307	960 aa		5.68	□□□□□ -1.5
CYK3	YDL117W	GUA1	P38625	525 aa	Known RBP	5.68	□□□□□ -1.5
CYK3	YDL117W	LAM5	P43560	674 aa		5.68	□□□□□ -1.5
CYK3	YDL117W	PRY3	P47033	881 aa		5.68	□□□□□ -1.5
CYK3	YDL117W	LSC1	P53598	329 aa	Known RBP	5.68	□□□□□ -1.5
CYK3	YDL117W	FMP30	Q02883	468 aa		5.68	□□□□□ -1.5
CYK3	YDL117W	SNZ1	Q03148	297 aa		5.68	□□□□□ -1.5
CYK3	YDL117W	DBP10	Q12389	995 aa	Known RBP	5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms