RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSH1	YBR283C	RRT14	P40470	206 aa		4.94	□□□□□ -1.62
SSH1	YBR283C	DAN4	P47179	1161 aa		4.94	□□□□□ -1.62
SSH1	YBR283C	ITC1	P53125	1264 aa		4.94	□□□□□ -1.62
SSH1	YBR283C	RGR1	P19263	1082 aa		4.93	□□□□□ -1.62
SSH1	YBR283C	VRP1	P37370	817 aa		4.93	□□□□□ -1.62
SSH1	YBR283C	YBP2	P53169	641 aa		4.93	□□□□□ -1.62
SSH1	YBR283C	PIL1	P53252	339 aa	Known RBP	4.93	□□□□□ -1.62
SSH1	YBR283C	TFB3	Q03290	321 aa		4.93	□□□□□ -1.62
SSH1	YBR283C	AOS1	Q06624	347 aa		4.93	□□□□□ -1.62
SSH1	YBR283C	ALE1	Q08548	619 aa		4.93	□□□□□ -1.62
SSH1	YBR283C	SRS2	P12954	1174 aa		4.92	□□□□□ -1.62
SSH1	YBR283C	YBR287W	P38355	427 aa		4.92	□□□□□ -1.62
SSH1	YBR283C	MVP1	P40959	511 aa	Known RBP	4.92	□□□□□ -1.62
SSH1	YBR283C	ALD2	P47771	506 aa		4.92	□□□□□ -1.62
SSH1	YBR283C	DUR1,2	P32528	1835 aa	Known RBP	4.92	□□□□□ -1.62
SSH1	YBR283C	UGA2	P38067	497 aa		4.91	□□□□□ -1.62
SSH1	YBR283C	SLI15	P38283	698 aa		4.91	□□□□□ -1.62
SSH1	YBR283C	ILV3	P39522	585 aa	Known RBP	4.91	□□□□□ -1.62
SSH1	YBR283C	GCR2	Q01722	534 aa		4.91	□□□□□ -1.62
SSH1	YBR283C	TFB4	Q12004	338 aa		4.91	□□□□□ -1.62
SSH1	YBR283C	RAD50	P12753	1312 aa		4.91	□□□□□ -1.62
SSH1	YBR283C	GAP1	P19145	602 aa	Predicted RBP	4.9	□□□□□ -1.62
SSH1	YBR283C	GRX1	P25373	110 aa	Known RBP	4.9	□□□□□ -1.62
SSH1	YBR283C	DLD1	P32891	587 aa		4.9	□□□□□ -1.62
SSH1	YBR283C	BDH2	P39713	417 aa		4.9	□□□□□ -1.62
SSH1	YBR283C	GYP7	P48365	746 aa		4.9	□□□□□ -1.62
SSH1	YBR283C	PEX21	P50091	288 aa		4.9	□□□□□ -1.62
SSH1	YBR283C	LCD1	Q04377	747 aa		4.9	□□□□□ -1.62
SSH1	YBR283C	NKP2	Q06162	153 aa		4.9	□□□□□ -1.62
SSH1	YBR283C	NOP58	Q12499	511 aa	Known RBP	4.9	□□□□□ -1.62
SSH1	YBR283C	KCC4	P25389	1037 aa		4.89	□□□□□ -1.63
SSH1	YBR283C	KRE33	P53914	1056 aa	Known RBP	4.89	□□□□□ -1.63
SSH1	YBR283C	YNL050C	P53952	270 aa		4.89	□□□□□ -1.63
SSH1	YBR283C	CTF4	Q01454	927 aa		4.89	□□□□□ -1.63
SSH1	YBR283C	COG8	Q04632	607 aa		4.89	□□□□□ -1.63
SSH1	YBR283C	RPS19A	P07280	144 aa	Known RBP	4.88	□□□□□ -1.63
SSH1	YBR283C	RPS19B	P07281	144 aa	Predicted RBP	4.88	□□□□□ -1.63
SSH1	YBR283C	RKM3	P38222	552 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	CIR1	P42940	261 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	YPP1	P46951	817 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	ZDS2	P54786	942 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	SRT1	Q03175	343 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	RMT2	Q03305	412 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	CTI6	Q08923	506 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	BUG1	Q12191	341 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	QCR6	P00127	147 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	CDC16	P09798	840 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	BRN1	P38170	754 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	MAM1	P40065	302 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	HYR1	P40581	163 aa	Known RBP	4.88	□□□□□ -1.63
SSH1	YBR283C	RSC1	P53236	928 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	HST1	P53685	503 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	HST2	P53686	357 aa		4.88	□□□□□ -1.63
SSH1	YBR283C	RIX7	Q07844	837 aa	Known RBP	4.88	□□□□□ -1.63
SSH1	YBR283C	COQ4	O13525	335 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	RAD4	P14736	754 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	SER1	P33330	395 aa	Known RBP	4.87	□□□□□ -1.63
SSH1	YBR283C	APL2	P36000	726 aa	Predicted RBP	4.87	□□□□□ -1.63
SSH1	YBR283C	YNG2	P38806	282 aa	Known RBP	4.87	□□□□□ -1.63
SSH1	YBR283C	NPA3	P47122	385 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	ZDS1	P50111	915 aa	Known RBP	4.87	□□□□□ -1.63
SSH1	YBR283C	YGL082W	P53155	381 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	ALD3	P54114	506 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	CSI1	Q04368	295 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	YPR109W	Q06104	294 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	YDL129W	Q07555	291 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	BMS1	Q08965	1183 aa	Known RBP	4.87	□□□□□ -1.63
SSH1	YBR283C	AIM44	Q99299	758 aa		4.87	□□□□□ -1.63
SSH1	YBR283C	RPN12	P32496	274 aa		4.86	□□□□□ -1.63
SSH1	YBR283C	RFC1	P38630	861 aa	Known RBP	4.86	□□□□□ -1.63
SSH1	YBR283C	EAF6	P47128	113 aa		4.86	□□□□□ -1.63
SSH1	YBR283C	VPS64	Q03944	604 aa		4.86	□□□□□ -1.63
SSH1	YBR283C	HRQ1	Q05549	1077 aa		4.86	□□□□□ -1.63
SSH1	YBR283C	NYV1	Q12255	253 aa		4.86	□□□□□ -1.63
SSH1	YBR283C	LYS2	P07702	1392 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	UGA3	P26370	528 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	TOS1	P38288	455 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	HXT13	P39924	564 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	SPO1	P53541	631 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	FPK1	P53739	893 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	NIS1	P53939	407 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	NSE3	Q05541	303 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	DPL1	Q05567	589 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	MMP1	Q12372	583 aa		4.85	□□□□□ -1.63
SSH1	YBR283C	TRL1	P09880	827 aa	Known RBP	4.84	□□□□□ -1.63
SSH1	YBR283C	RNR2	P09938	399 aa	Known RBP	4.84	□□□□□ -1.63
SSH1	YBR283C	MCM2	P29469	868 aa		4.84	□□□□□ -1.63
SSH1	YBR283C	GCD7	P32502	381 aa	Predicted RBP	4.84	□□□□□ -1.63
SSH1	YBR283C	RVS167	P39743	482 aa	Known RBP	4.84	□□□□□ -1.63
SSH1	YBR283C	RPL34B	P40525	121 aa	Known RBP	4.84	□□□□□ -1.63
SSH1	YBR283C	VPS20	Q04272	221 aa		4.84	□□□□□ -1.63
SSH1	YBR283C	CDC73	Q06697	393 aa		4.84	□□□□□ -1.63
SSH1	YBR283C	ARG8	P18544	423 aa		4.83	□□□□□ -1.64
SSH1	YBR283C	SIT4	P20604	311 aa		4.83	□□□□□ -1.64
SSH1	YBR283C	PKC1	P24583	1151 aa		4.83	□□□□□ -1.64
SSH1	YBR283C	MPE1	P35728	441 aa	Known RBP	4.83	□□□□□ -1.64
SSH1	YBR283C	SIS2	P36024	562 aa		4.83	□□□□□ -1.64
SSH1	YBR283C	YBL036C	P38197	257 aa		4.83	□□□□□ -1.64
SSH1	YBR283C	NMD2	P38798	1089 aa	Known RBP	4.83	□□□□□ -1.64
SSH1	YBR283C	RSM25	P40496	264 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms