RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W PEX21P50091 288 aa5.99□□□□□ -1.45
SIF2YBR103W ECM23Q02710 187 aa5.99□□□□□ -1.45
SIF2YBR103W FPR4Q06205 392 aaPredicted RBP5.99□□□□□ -1.45
SIF2YBR103W TFB4Q12004 338 aa5.99□□□□□ -1.45
SIF2YBR103W HTA1P04911 132 aaKnown RBP5.98□□□□□ -1.45
SIF2YBR103W HTA2P04912 132 aa5.98□□□□□ -1.45
SIF2YBR103W HSP104P31539 908 aaKnown RBP5.98□□□□□ -1.45
SIF2YBR103W ENV11P53246 860 aa5.98□□□□□ -1.45
SIF2YBR103W SLY41P22215 453 aa5.97□□□□□ -1.45
SIF2YBR103W SLI15P38283 698 aa5.97□□□□□ -1.45
SIF2YBR103W ILV3P39522 585 aaKnown RBP5.97□□□□□ -1.45
SIF2YBR103W RRP46P53256 223 aaPredicted RBP5.97□□□□□ -1.45
SIF2YBR103W PAP2P53632 584 aaKnown RBP5.97□□□□□ -1.45
SIF2YBR103W ALD3P54114 506 aa5.97□□□□□ -1.45
SIF2YBR103W SPT2P06843 333 aaPredicted RBP5.96□□□□□ -1.45
SIF2YBR103W RSC30P38781 883 aa5.96□□□□□ -1.45
SIF2YBR103W TGL3P40308 642 aa5.96□□□□□ -1.45
SIF2YBR103W KTR7P40504 517 aa5.96□□□□□ -1.45
SIF2YBR103W YBP2P53169 641 aa5.96□□□□□ -1.45
SIF2YBR103W UTP22P53254 1237 aaPredicted RBP5.96□□□□□ -1.45
SIF2YBR103W AOS1Q06624 347 aa5.96□□□□□ -1.45
SIF2YBR103W HSP82P02829 709 aaKnown RBP5.96□□□□□ -1.46
SIF2YBR103W PEP12P32854 288 aa5.96□□□□□ -1.46
SIF2YBR103W NTH2P35172 780 aa5.96□□□□□ -1.46
SIF2YBR103W NAF1P53919 492 aaKnown RBP5.96□□□□□ -1.46
SIF2YBR103W BUG1Q12191 341 aa5.96□□□□□ -1.46
SIF2YBR103W PRS1P32895 427 aaKnown RBP5.95□□□□□ -1.46
SIF2YBR103W YOL036WQ08206 761 aa5.95□□□□□ -1.46
SIF2YBR103W PSH1Q12161 406 aa5.95□□□□□ -1.46
SIF2YBR103W UTP10P42945 1769 aaKnown RBP5.94□□□□□ -1.46
SIF2YBR103W TOS1P38288 455 aa5.94□□□□□ -1.46
SIF2YBR103W UBX7P38349 436 aa5.94□□□□□ -1.46
SIF2YBR103W ERP5P38819 212 aa5.94□□□□□ -1.46
SIF2YBR103W KAR5Q04746 504 aa5.94□□□□□ -1.46
SIF2YBR103W TUM1Q08686 304 aaKnown RBP5.94□□□□□ -1.46
SIF2YBR103W MSC6Q08818 692 aaKnown RBP5.94□□□□□ -1.46
SIF2YBR103W KCC4P25389 1037 aa5.93□□□□□ -1.46
SIF2YBR103W MCM16Q12262 181 aa5.93□□□□□ -1.46
SIF2YBR103W GAL2P13181 574 aa5.92□□□□□ -1.46
SIF2YBR103W UGA3P26370 528 aa5.92□□□□□ -1.46
SIF2YBR103W DAN4P47179 1161 aa5.92□□□□□ -1.46
SIF2YBR103W MDG1P53885 366 aa5.92□□□□□ -1.46
SIF2YBR103W YNL050CP53952 270 aa5.92□□□□□ -1.46
SIF2YBR103W RMT2Q03305 412 aa5.92□□□□□ -1.46
SIF2YBR103W CDC73Q06697 393 aa5.92□□□□□ -1.46
SIF2YBR103W BRN1P38170 754 aa5.92□□□□□ -1.46
SIF2YBR103W SET4P42948 560 aa5.92□□□□□ -1.46
SIF2YBR103W POL32P47110 350 aa5.92□□□□□ -1.46
SIF2YBR103W YNL115CP53925 644 aa5.92□□□□□ -1.46
SIF2YBR103W PLP2Q12017 286 aa5.92□□□□□ -1.46
SIF2YBR103W LYS2P07702 1392 aa5.92□□□□□ -1.46
SIF2YBR103W TRM1P15565 570 aaKnown RBP5.91□□□□□ -1.46
SIF2YBR103W RDS2P19541 446 aaKnown RBP5.91□□□□□ -1.46
SIF2YBR103W PRD1P25375 712 aa5.91□□□□□ -1.46
SIF2YBR103W YHL050CP38721 697 aa5.91□□□□□ -1.46
SIF2YBR103W YHR219WP38900 624 aa5.91□□□□□ -1.46
SIF2YBR103W SVF1Q05515 481 aa5.91□□□□□ -1.46
SIF2YBR103W NYV1Q12255 253 aa5.91□□□□□ -1.46
SIF2YBR103W YEL077CQ3E7X8 1277 aa5.91□□□□□ -1.46
SIF2YBR103W GRS1P38088 690 aaKnown RBP5.9□□□□□ -1.46
SIF2YBR103W OCA5P38738 679 aa5.9□□□□□ -1.46
SIF2YBR103W NMD2P38798 1089 aaKnown RBP5.9□□□□□ -1.46
SIF2YBR103W PHM7Q12252 991 aa5.9□□□□□ -1.46
SIF2YBR103W RTR1P40084 226 aaPredicted RBP5.89□□□□□ -1.47
SIF2YBR103W TBF1Q02457 562 aa5.89□□□□□ -1.47
SIF2YBR103W SPC110P32380 944 aa5.88□□□□□ -1.47
SIF2YBR103W PPX1P38698 397 aa5.88□□□□□ -1.47
SIF2YBR103W SNF7P39929 240 aaKnown RBP5.88□□□□□ -1.47
SIF2YBR103W YEL023CP39992 682 aa5.88□□□□□ -1.47
SIF2YBR103W SAP155P43612 1002 aa5.88□□□□□ -1.47
SIF2YBR103W PUS6P53294 404 aa5.88□□□□□ -1.47
SIF2YBR103W NSE3Q05541 303 aa5.88□□□□□ -1.47
SIF2YBR103W RRP15Q06511 250 aaPredicted RBP5.88□□□□□ -1.47
SIF2YBR103W ALE1Q08548 619 aa5.88□□□□□ -1.47
SIF2YBR103W ERT1P38140 529 aa5.88□□□□□ -1.47
SIF2YBR103W MAM1P40065 302 aa5.88□□□□□ -1.47
SIF2YBR103W NNF1P47149 201 aa5.88□□□□□ -1.47
SIF2YBR103W SSP2Q08646 371 aa5.88□□□□□ -1.47
SIF2YBR103W ISF1P32488 338 aa5.87□□□□□ -1.47
SIF2YBR103W OPY1P38271 328 aa5.87□□□□□ -1.47
SIF2YBR103W TPS3P38426 1054 aaKnown RBP5.87□□□□□ -1.47
SIF2YBR103W PUF6Q04373 656 aaKnown RBP5.87□□□□□ -1.47
SIF2YBR103W CTT1P06115 562 aa5.86□□□□□ -1.47
SIF2YBR103W TRL1P09880 827 aaKnown RBP5.86□□□□□ -1.47
SIF2YBR103W ATE1P16639 503 aa5.86□□□□□ -1.47
SIF2YBR103W RPC31P17890 251 aa5.86□□□□□ -1.47
SIF2YBR103W ATG3P40344 310 aa5.86□□□□□ -1.47
SIF2YBR103W EMP47P43555 445 aa5.86□□□□□ -1.47
SIF2YBR103W EAF6P47128 113 aa5.86□□□□□ -1.47
SIF2YBR103W ZDS1P50111 915 aaKnown RBP5.86□□□□□ -1.47
SIF2YBR103W CWC15Q03772 175 aaKnown RBP5.86□□□□□ -1.47
SIF2YBR103W THI22Q06490 572 aa5.86□□□□□ -1.47
SIF2YBR103W RIX7Q07844 837 aaKnown RBP5.86□□□□□ -1.47
SIF2YBR103W YRR1Q12172 810 aa5.86□□□□□ -1.47
SIF2YBR103W NOP58Q12499 511 aaKnown RBP5.86□□□□□ -1.47
SIF2YBR103W YKL222CP35995 705 aa5.85□□□□□ -1.47
SIF2YBR103W RRT14P40470 206 aa5.85□□□□□ -1.47
SIF2YBR103W MDJ2P42834 146 aa5.85□□□□□ -1.47
SIF2YBR103W BUD27P43573 796 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
SIF2YBR103W MSN5P52918 1224 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms