RNA–Protein interactions for RNA: ENST00000476586.5

PSME4-206, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 1,422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-206ENST00000476586 VPS8Q8N3P4 1428 aa10.02□□□□□ -0.8
PSME4-206ENST00000476586 CARMIL1Q5VZK9 1371 aa10.02□□□□□ -0.81
PSME4-206ENST00000476586 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
PSME4-206ENST00000476586 CFHP08603 1231 aa10.02□□□□□ -0.81
PSME4-206ENST00000476586 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
PSME4-206ENST00000476586 RSPH6AQ9H0K4 717 aa10.02□□□□□ -0.81
PSME4-206ENST00000476586 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
PSME4-206ENST00000476586 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.81
PSME4-206ENST00000476586 PPP4CP60510 307 aa10.01□□□□□ -0.81
PSME4-206ENST00000476586 GCGRP47871 477 aa10□□□□□ -0.81
PSME4-206ENST00000476586 SPIRE2Q8WWL2 714 aa10□□□□□ -0.81
PSME4-206ENST00000476586 POLR3EQ9NVU0 708 aa10□□□□□ -0.81
PSME4-206ENST00000476586 KDM4AO75164 1064 aa9.99□□□□□ -0.81
PSME4-206ENST00000476586 DIXDC1Q155Q3 683 aa9.99□□□□□ -0.81
PSME4-206ENST00000476586 NECTIN2Q92692 538 aa9.99□□□□□ -0.81
PSME4-206ENST00000476586 CUL7Q14999 1698 aa9.99□□□□□ -0.81
PSME4-206ENST00000476586 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
PSME4-206ENST00000476586 KMT5BQ4FZB7 885 aa9.99□□□□□ -0.81
PSME4-206ENST00000476586 SH3D19Q5HYK7 790 aa9.99□□□□□ -0.81
PSME4-206ENST00000476586 TSR3Q9UJK0 312 aaKnown RBP9.99□□□□□ -0.81
PSME4-206ENST00000476586 RAD54L2Q9Y4B4 1467 aa9.98□□□□□ -0.81
PSME4-206ENST00000476586 KIF21AQ7Z4S6 1674 aa9.98□□□□□ -0.81
PSME4-206ENST00000476586 MRC2Q9UBG0 1479 aa9.98□□□□□ -0.81
PSME4-206ENST00000476586 MYSM1Q5VVJ2 828 aa9.98□□□□□ -0.81
PSME4-206ENST00000476586 PCMTD1Q96MG8 357 aaPredicted RBP9.98□□□□□ -0.81
PSME4-206ENST00000476586 THSD4Q6ZMP0 1018 aa9.97□□□□□ -0.81
PSME4-206ENST00000476586 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
PSME4-206ENST00000476586 WDR97A6NE52 1622 aa9.96□□□□□ -0.81
PSME4-206ENST00000476586 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
PSME4-206ENST00000476586 PCDH10Q9P2E7 1040 aa9.96□□□□□ -0.82
PSME4-206ENST00000476586 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
PSME4-206ENST00000476586 NDUFV2P19404 249 aa9.95□□□□□ -0.82
PSME4-206ENST00000476586 CLK2P49760 499 aaKnown RBP9.95□□□□□ -0.82
PSME4-206ENST00000476586 PTPN5P54829 565 aa9.95□□□□□ -0.82
PSME4-206ENST00000476586 USP46P62068 366 aa9.95□□□□□ -0.82
PSME4-206ENST00000476586 FUT2Q10981 343 aa9.95□□□□□ -0.82
PSME4-206ENST00000476586 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
PSME4-206ENST00000476586 CSPP1Q1MSJ5 1256 aa9.94□□□□□ -0.82
PSME4-206ENST00000476586 RIC3Q7Z5B4 369 aa9.94□□□□□ -0.82
PSME4-206ENST00000476586 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
PSME4-206ENST00000476586 PRR14Q9BWN1 585 aa9.94□□□□□ -0.82
PSME4-206ENST00000476586 ABCA5Q8WWZ7 1642 aa9.93□□□□□ -0.82
PSME4-206ENST00000476586 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
PSME4-206ENST00000476586 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
PSME4-206ENST00000476586 GOPCQ9HD26 462 aa9.93□□□□□ -0.82
PSME4-206ENST00000476586 GTF3C3Q9Y5Q9 886 aa9.93□□□□□ -0.82
PSME4-206ENST00000476586 GAPVD1Q14C86 1478 aa9.93□□□□□ -0.82
PSME4-206ENST00000476586 ARAP1Q96P48 1450 aa9.92□□□□□ -0.82
PSME4-206ENST00000476586 HOXA2O43364 376 aa9.92□□□□□ -0.82
PSME4-206ENST00000476586 RANGAP1P46060 587 aaPredicted RBP9.92□□□□□ -0.82
PSME4-206ENST00000476586 APLP1P51693 650 aa9.92□□□□□ -0.82
PSME4-206ENST00000476586 ACTN4O43707 911 aaKnown RBP9.91□□□□□ -0.82
PSME4-206ENST00000476586 GUCA2AQ02747 115 aa9.91□□□□□ -0.82
PSME4-206ENST00000476586 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
PSME4-206ENST00000476586 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
PSME4-206ENST00000476586 HLA-CQ95604 372 aa9.91□□□□□ -0.82
PSME4-206ENST00000476586 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
PSME4-206ENST00000476586 ARHGAP35Q9NRY4 1499 aa9.91□□□□□ -0.82
PSME4-206ENST00000476586 TARBP1Q13395 1621 aaKnown RBP9.91□□□□□ -0.82
PSME4-206ENST00000476586 ATP6V1AP38606 617 aa9.9□□□□□ -0.82
PSME4-206ENST00000476586 IFT140Q96RY7 1462 aa9.9□□□□□ -0.82
PSME4-206ENST00000476586 TDRD9Q8NDG6 1382 aaKnown RBP9.9□□□□□ -0.82
PSME4-206ENST00000476586 WDR62O43379 1518 aa9.9□□□□□ -0.83
PSME4-206ENST00000476586 SPTLC1O15269 473 aa9.9□□□□□ -0.83
PSME4-206ENST00000476586 FDX1P10109 184 aa9.9□□□□□ -0.83
PSME4-206ENST00000476586 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.83
PSME4-206ENST00000476586 EFCAB5A4FU69 1503 aa9.89□□□□□ -0.83
PSME4-206ENST00000476586 FHAD1B1AJZ9 1412 aa9.89□□□□□ -0.83
PSME4-206ENST00000476586 PCDHB3Q9Y5E6 796 aa9.89□□□□□ -0.83
PSME4-206ENST00000476586 ERCC6Q03468 1493 aa9.88□□□□□ -0.83
PSME4-206ENST00000476586 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
PSME4-206ENST00000476586 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
PSME4-206ENST00000476586 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
PSME4-206ENST00000476586 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
PSME4-206ENST00000476586 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
PSME4-206ENST00000476586 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
PSME4-206ENST00000476586 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
PSME4-206ENST00000476586 MAP3K1Q13233 1512 aa9.86□□□□□ -0.83
PSME4-206ENST00000476586 GRIN2BQ13224 1484 aa9.85□□□□□ -0.83
PSME4-206ENST00000476586 COPS2P61201 443 aa9.85□□□□□ -0.83
PSME4-206ENST00000476586 MORN1Q5T089 497 aa9.85□□□□□ -0.83
PSME4-206ENST00000476586 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
PSME4-206ENST00000476586 GJA5P36382 358 aa9.84□□□□□ -0.83
PSME4-206ENST00000476586 BLOC1S3Q6QNY0 202 aa9.84□□□□□ -0.83
PSME4-206ENST00000476586 NYAP1Q6ZVC0 841 aa9.84□□□□□ -0.83
PSME4-206ENST00000476586 CABLES1Q8TDN4 633 aa9.84□□□□□ -0.83
PSME4-206ENST00000476586 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.83
PSME4-206ENST00000476586 PCDHGC3Q9UN70 934 aa9.84□□□□□ -0.83
PSME4-206ENST00000476586 SLC27A5Q9Y2P5 690 aa9.84□□□□□ -0.83
PSME4-206ENST00000476586 TTBK1Q5TCY1 1321 aaPredicted RBP9.84□□□□□ -0.83
PSME4-206ENST00000476586 PBRM1Q86U86 1689 aa9.83□□□□□ -0.84
PSME4-206ENST00000476586 QPCTQ16769 361 aa9.83□□□□□ -0.84
PSME4-206ENST00000476586 NR1I2O75469 434 aa9.82□□□□□ -0.84
PSME4-206ENST00000476586 ZBTB3Q9H5J0 574 aa9.82□□□□□ -0.84
PSME4-206ENST00000476586 AQRO60306 1485 aaKnown RBP eCLIP9.82□□□□□ -0.848e-7■■■■□ 26.3
PSME4-206ENST00000476586 MTMR2Q13614 643 aa9.82□□□□□ -0.84
PSME4-206ENST00000476586 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
PSME4-206ENST00000476586 Q3C1V9 767 aa9.82□□□□□ -0.84
PSME4-206ENST00000476586 SYMPKQ92797 1274 aaKnown RBP9.82□□□□□ -0.84
PSME4-206ENST00000476586 FMN1Q68DA7 1419 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms