RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 ErbinQ80TH2 1402 aa13.81□□□□□ -0.2
Ccdc28a-205ENSMUST00000174592 NalcnQ8BXR5 1738 aa13.8□□□□□ -0.2
Ccdc28a-205ENSMUST00000174592 Zfp644E9QA22 1323 aa13.8□□□□□ -0.2
Ccdc28a-205ENSMUST00000174592 Sall3Q62255 1320 aa13.8□□□□□ -0.2
Ccdc28a-205ENSMUST00000174592 Prdm2A2A7B5 1709 aaKnown RBP13.79□□□□□ -0.2
Ccdc28a-205ENSMUST00000174592 Rreb1Q3UH06 1700 aaKnown RBP13.78□□□□□ -0.2
Ccdc28a-205ENSMUST00000174592 VirmaA2AIV2 1811 aaKnown RBP13.78□□□□□ -0.2
Ccdc28a-205ENSMUST00000174592 Kiaa0319Q5SZV5 1081 aa13.77□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Fam50aQ9WV03 339 aaKnown RBP13.77□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Fam135bQ9DAI6 1403 aa13.76□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 AatkQ80YE4 1365 aa13.76□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Ubap1lG3UW59 384 aa13.75□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Tnks1bp1P58871 1720 aa13.75□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 UacaQ8CGB3 1411 aa13.74□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 AU022751B1B0V2 589 aa13.74□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Pik3c2bE9QAN8 1632 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Ube2uB1AUC4 352 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Kcna3P16390 528 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Q3UJC8 639 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Trak1Q6PD31 939 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Sirt1Q923E4 737 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Pik3c2gO70167 1506 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Adamtsl1Q8BLI0 1745 aa13.73□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 N4bp2F8VQG7 1678 aaKnown RBP13.72□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Cadps2Q8BYR5 1297 aa13.72□□□□□ -0.21
Ccdc28a-205ENSMUST00000174592 Atp7bQ64446 1462 aa13.69□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Rapgefl1Q68EF8 662 aa13.69□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Sipa1l2Q80TE4 1722 aa13.69□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Rfx7F8VPJ6 1459 aa13.68□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Ift172Q6VH22 1749 aa13.68□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Itsn2Q9Z0R6 1659 aa13.68□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Wnk3Q80XP9 1757 aa13.68□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Atp10bB1AWN4 1474 aa13.67□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Edc4Q3UJB9 1406 aaKnown RBP13.66□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Cps1Q8C196 1500 aa13.66□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Utp14aQ640M1 767 aaKnown RBP13.66□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Dhx9O70133 1380 aaKnown RBP13.65□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Kif20bQ80WE4 1774 aaKnown RBP13.65□□□□□ -0.22
Ccdc28a-205ENSMUST00000174592 Tnrc6cQ3UHC0 1690 aaKnown RBP13.64□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Sox12Q04890 314 aa13.64□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Tmem2Q5FWI3 1383 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Magea1O89006 320 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Magea5O89009 320 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 En2P09066 324 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Yy1Q00899 414 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Stk26Q99JT2 416 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Magea2Q9R2A2 320 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Usp32F8VPZ3 1604 aa13.63□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Shank2Q80Z38 1476 aa13.62□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Ltbp1Q8CG19 1712 aa13.62□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Rtl5Q5DTT4 599 aa13.62□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Apba2P98084 750 aa13.61□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Cdhr2E9Q7P9 1308 aa13.61□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Nrxn1Q9CS84 1514 aa13.6□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Ppef1O35655 650 aa13.6□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Hdac5Q9Z2V6 1113 aa13.6□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 PsdQ5DTT2 1024 aa13.59□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Ezh2Q61188 746 aaKnown RBP13.59□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Ppp6r1Q7TSI3 856 aa13.59□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Nup153E9Q3G8 1462 aaKnown RBP13.59□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Pola1P33609 1465 aa13.59□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Kif1aP33173 1695 aa13.59□□□□□ -0.23
Ccdc28a-205ENSMUST00000174592 Idi1P58044 227 aa13.58□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Ccdc129Q14B48 1034 aa13.58□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Dixdc1Q80Y83 711 aa13.58□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Gpr150Q8BL07 427 aa13.58□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Myom1Q62234 1667 aaKnown RBP13.57□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Taok3Q8BYC6 898 aa13.57□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 NgefQ8CHT1 710 aa13.57□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Mroh3A0A1D5RM54 893 aa13.56□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 HdgfP51859 237 aaKnown RBP13.56□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 ZgpatQ8VDM1 511 aa13.56□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 MaddQ80U28 1577 aa13.56□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Camta1A2A891 1682 aa13.56□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Zcwpw1Q6IR42 630 aa13.55□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Ap3b2Q9JME5 1082 aa13.55□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Txnrd1Q9JMH6 613 aa13.55□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Wdr17E9Q271 1322 aa13.55□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 PtpruB1AUH1 1446 aa13.55□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Rims1Q99NE5 1463 aa13.55□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Zmym3Q9JLM4 1370 aa13.54□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 D430041D05RikF6ZGR6 1678 aa13.53□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Slc52a2Q9D8F3 450 aa13.53□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Plxnc1Q9QZC2 1574 aa13.53□□□□□ -0.24
Ccdc28a-205ENSMUST00000174592 Ly75Q60767 1723 aa13.52□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Nfat5Q9WV30 1534 aa13.5□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Zdbf2Q5SS00 2493 aaKnown RBP13.5□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Fyb1O35601 819 aa13.49□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Pm20d1Q8C165 503 aa13.49□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 C5P06684 1680 aa13.49□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Cacna1sQ02789 1880 aa13.48□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Polr3aB2RXC6 1390 aa13.47□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Astn2Q80Z10 1352 aa13.47□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Als2Q920R0 1651 aa13.47□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Ubxn2bQ0KL01 331 aa13.47□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 Plekhg1F6S200 1446 aa13.47□□□□□ -0.25
Ccdc28a-205ENSMUST00000174592 4930523C07RikE9Q2T4 99 aa13.45□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 NefmP08553 848 aa13.45□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Os9Q8K2C7 672 aa13.45□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Kcnq2Q9Z351 759 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms