RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Med14A2ABV5 1459 aaKnown RBP14.48□□□□□ -0.09
Lig3-210ENSMUST00000173347 Zc3h13E9Q784 1729 aaKnown RBP14.48□□□□□ -0.09
Lig3-210ENSMUST00000173347 Psme1P97371 249 aa14.48□□□□□ -0.09
Lig3-210ENSMUST00000173347 Eif2ak4Q9QZ05 1648 aa14.48□□□□□ -0.09
Lig3-210ENSMUST00000173347 1700123L14RikQ3V2K7 440 aa14.48□□□□□ -0.09
Lig3-210ENSMUST00000173347 Nlrp6Q91WS2 869 aa14.47□□□□□ -0.09
Lig3-210ENSMUST00000173347 Prdm10Q3UTQ7 1184 aa14.47□□□□□ -0.09
Lig3-210ENSMUST00000173347 Mink1Q9JM52 1308 aa14.47□□□□□ -0.09
Lig3-210ENSMUST00000173347 Gprasp1Q5U4C1 1347 aa14.46□□□□□ -0.09
Lig3-210ENSMUST00000173347 Plekhg1F6S200 1446 aa14.45□□□□□ -0.1
Lig3-210ENSMUST00000173347 Aplp2Q06335 707 aa14.45□□□□□ -0.1
Lig3-210ENSMUST00000173347 Calr4Q3TQS0 420 aa14.45□□□□□ -0.1
Lig3-210ENSMUST00000173347 Atp2b2Q9R0K7 1198 aa14.45□□□□□ -0.1
Lig3-210ENSMUST00000173347 Cep170bQ80U49 1574 aa14.44□□□□□ -0.1
Lig3-210ENSMUST00000173347 Atf7ipQ7TT18 1306 aa14.44□□□□□ -0.1
Lig3-210ENSMUST00000173347 PplQ9R269 1755 aa14.44□□□□□ -0.1
Lig3-210ENSMUST00000173347 Gsto1O09131 240 aa14.43□□□□□ -0.1
Lig3-210ENSMUST00000173347 Dip2aQ8BWT5 1523 aa14.42□□□□□ -0.1
Lig3-210ENSMUST00000173347 Gemin5Q8BX17 1502 aaKnown RBP14.41□□□□□ -0.1
Lig3-210ENSMUST00000173347 Esx1O88933 382 aa14.4□□□□□ -0.1
Lig3-210ENSMUST00000173347 KdrP35918 1367 aa14.4□□□□□ -0.1
Lig3-210ENSMUST00000173347 Asxl2Q8BZ32 1370 aa14.4□□□□□ -0.1
Lig3-210ENSMUST00000173347 Cdk19Q8BWD8 501 aa14.39□□□□□ -0.11
Lig3-210ENSMUST00000173347 Chd2E9PZM4 1827 aaKnown RBP14.39□□□□□ -0.11
Lig3-210ENSMUST00000173347 FanciQ8K368 1330 aa14.38□□□□□ -0.11
Lig3-210ENSMUST00000173347 Zfp444Q3TDV8 331 aaKnown RBP14.38□□□□□ -0.11
Lig3-210ENSMUST00000173347 Rad21Q61550 635 aaKnown RBP14.38□□□□□ -0.11
Lig3-210ENSMUST00000173347 Abca14E9Q8F8 1683 aa14.37□□□□□ -0.11
Lig3-210ENSMUST00000173347 SafbD3YXK2 937 aaKnown RBP14.36□□□□□ -0.11
Lig3-210ENSMUST00000173347 Zranb1Q7M760 708 aa14.36□□□□□ -0.11
Lig3-210ENSMUST00000173347 Upf2A2AT37 1269 aaKnown RBP14.35□□□□□ -0.11
Lig3-210ENSMUST00000173347 Nrxn1Q9CS84 1514 aa14.35□□□□□ -0.11
Lig3-210ENSMUST00000173347 Cald1E9QA15 768 aaKnown RBP14.34□□□□□ -0.11
Lig3-210ENSMUST00000173347 Scaf11E9PZM7 1456 aaKnown RBP14.34□□□□□ -0.11
Lig3-210ENSMUST00000173347 Pcdh10E9PXQ7 1057 aa14.33□□□□□ -0.11
Lig3-210ENSMUST00000173347 PzpQ61838 1495 aa14.33□□□□□ -0.12
Lig3-210ENSMUST00000173347 L3mbtl2P59178 703 aa14.32□□□□□ -0.12
Lig3-210ENSMUST00000173347 CrbnQ8C7D2 445 aa14.32□□□□□ -0.12
Lig3-210ENSMUST00000173347 Slit3Q9WVB4 1523 aa14.32□□□□□ -0.12
Lig3-210ENSMUST00000173347 NktrP30415 1453 aa14.32□□□□□ -0.12
Lig3-210ENSMUST00000173347 Dip2bQ3UH60 1574 aa14.32□□□□□ -0.12
Lig3-210ENSMUST00000173347 MyclP10166 368 aa14.32□□□□□ -0.12
Lig3-210ENSMUST00000173347 Golga2Q921M4 999 aa14.32□□□□□ -0.12
Lig3-210ENSMUST00000173347 Nwd1A6H603 1563 aa14.31□□□□□ -0.12
Lig3-210ENSMUST00000173347 Gm38655A0A286YDK6 273 aa14.31□□□□□ -0.12
Lig3-210ENSMUST00000173347 Dnajc5P60904 198 aa14.31□□□□□ -0.12
Lig3-210ENSMUST00000173347 IbtkQ6ZPR6 1352 aaKnown RBP14.31□□□□□ -0.12
Lig3-210ENSMUST00000173347 Adgrl1Q80TR1 1466 aa14.31□□□□□ -0.12
Lig3-210ENSMUST00000173347 Kif16bB1AVY7 1312 aa14.31□□□□□ -0.12
Lig3-210ENSMUST00000173347 Kank1E9Q238 1360 aa14.3□□□□□ -0.12
Lig3-210ENSMUST00000173347 GsdmaQ9EST1 446 aa14.3□□□□□ -0.12
Lig3-210ENSMUST00000173347 CenpbP27790 599 aa14.3□□□□□ -0.12
Lig3-210ENSMUST00000173347 IghaA0A0A6YXW6 389 aa14.29□□□□□ -0.12
Lig3-210ENSMUST00000173347 NinlQ6ZQ12 1394 aa14.29□□□□□ -0.12
Lig3-210ENSMUST00000173347 Pik3r4Q8VD65 1358 aa14.29□□□□□ -0.12
Lig3-210ENSMUST00000173347 HnrnpmQ9D0E1 729 aaKnown RBP14.29□□□□□ -0.12
Lig3-210ENSMUST00000173347 Kiaa1107Q80TK0 1369 aa14.29□□□□□ -0.12
Lig3-210ENSMUST00000173347 Cps1Q8C196 1500 aa14.28□□□□□ -0.12
Lig3-210ENSMUST00000173347 GphnQ8BUV3 769 aaKnown RBP14.27□□□□□ -0.12
Lig3-210ENSMUST00000173347 Map3k19E9Q3S4 1311 aa14.27□□□□□ -0.13
Lig3-210ENSMUST00000173347 Speer4f1Q9D5Q6 258 aa14.27□□□□□ -0.13
Lig3-210ENSMUST00000173347 4930407I10RikD3Z5T8 1512 aa14.27□□□□□ -0.13
Lig3-210ENSMUST00000173347 Znf316Q6PGE4 1016 aa14.26□□□□□ -0.13
Lig3-210ENSMUST00000173347 Bcl9Q9D219 1425 aa14.25□□□□□ -0.13
Lig3-210ENSMUST00000173347 Usp19Q3UJD6 1360 aa14.25□□□□□ -0.13
Lig3-210ENSMUST00000173347 Map4k4P97820 1233 aaKnown RBP14.25□□□□□ -0.13
Lig3-210ENSMUST00000173347 Idi2Q8BFZ6 227 aa14.25□□□□□ -0.13
Lig3-210ENSMUST00000173347 Tsen2Q6P7W5 460 aa14.23□□□□□ -0.13
Lig3-210ENSMUST00000173347 P2rx7Q9Z1M0 595 aa14.23□□□□□ -0.13
Lig3-210ENSMUST00000173347 U2af1Q9D883 239 aaKnown RBP14.23□□□□□ -0.13
Lig3-210ENSMUST00000173347 Erbb3Q61526 1339 aa14.23□□□□□ -0.13
Lig3-210ENSMUST00000173347 Ralbp1Q62172 648 aa14.23□□□□□ -0.13
Lig3-210ENSMUST00000173347 Q3UJC8 639 aa14.22□□□□□ -0.13
Lig3-210ENSMUST00000173347 Uspl1Q3ULM6 1089 aa14.22□□□□□ -0.13
Lig3-210ENSMUST00000173347 Arap3Q8R5G7 1538 aa14.22□□□□□ -0.13
Lig3-210ENSMUST00000173347 Neurod2Q62414 383 aa14.22□□□□□ -0.13
Lig3-210ENSMUST00000173347 PtpruB1AUH1 1446 aa14.22□□□□□ -0.13
Lig3-210ENSMUST00000173347 Lmtk3Q5XJV6 1424 aa14.21□□□□□ -0.13
Lig3-210ENSMUST00000173347 CatipB9EKE5 520 aa14.21□□□□□ -0.14
Lig3-210ENSMUST00000173347 MlecQ6ZQI3 291 aaKnown RBP14.21□□□□□ -0.14
Lig3-210ENSMUST00000173347 Ccdc30Q8BVF4 654 aa14.21□□□□□ -0.14
Lig3-210ENSMUST00000173347 Sirt1Q923E4 737 aa14.2□□□□□ -0.14
Lig3-210ENSMUST00000173347 Plekhh1Q80TI1 1356 aa14.2□□□□□ -0.14
Lig3-210ENSMUST00000173347 Pik3c2bE9QAN8 1632 aa14.2□□□□□ -0.14
Lig3-210ENSMUST00000173347 NeflP08551 543 aa14.2□□□□□ -0.14
Lig3-210ENSMUST00000173347 Rreb1Q3UH06 1700 aaKnown RBP14.19□□□□□ -0.14
Lig3-210ENSMUST00000173347 Usp32F8VPZ3 1604 aa14.19□□□□□ -0.14
Lig3-210ENSMUST00000173347 Ttc41Q692V3 1318 aa14.19□□□□□ -0.14
Lig3-210ENSMUST00000173347 Wdr43Q6ZQL4 677 aaKnown RBP14.19□□□□□ -0.14
Lig3-210ENSMUST00000173347 Myt1Q8CFC2 1127 aa14.19□□□□□ -0.14
Lig3-210ENSMUST00000173347 Tnrc6bQ8BKI2 1810 aaKnown RBP14.18□□□□□ -0.14
Lig3-210ENSMUST00000173347 Anp32aO35381 247 aa14.18□□□□□ -0.14
Lig3-210ENSMUST00000173347 Birc3O08863 600 aa14.17□□□□□ -0.14
Lig3-210ENSMUST00000173347 Mapk8ip3Q9ESN9 1337 aa14.16□□□□□ -0.14
Lig3-210ENSMUST00000173347 Rwdd1Q9CQK7 243 aa14.15□□□□□ -0.14
Lig3-210ENSMUST00000173347 Apaf1O88879 1249 aa14.15□□□□□ -0.14
Lig3-210ENSMUST00000173347 Tcerg1Q8CGF7 1100 aaKnown RBP14.14□□□□□ -0.15
Lig3-210ENSMUST00000173347 Iqsec2Q5DU25 1478 aa14.14□□□□□ -0.15
Lig3-210ENSMUST00000173347 NgefQ8CHT1 710 aa14.14□□□□□ -0.15
Lig3-210ENSMUST00000173347 Kif1aP33173 1695 aa14.14□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms