RNA–Protein interactions for RNA: ENSMUST00000141557.7

Trappc13-203, Transcript of Trafficking protein particle complex subunit 13, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Trappc13, Length 3,502 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13-203ENSMUST00000141557 Slc52a2Q9D8F3 450 aa9.61□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Arfgef2A2A5R2 1792 aa9.61□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Chd4Q6PDQ2 1915 aaKnown RBP9.61□□□□□ -0.87
Trappc13-203ENSMUST00000141557 PappaQ8R4K8 1624 aa9.61□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Uhrf1bp1B2KF50 1429 aa9.6□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Sipa1l2Q80TE4 1722 aa9.6□□□□□ -0.87
Trappc13-203ENSMUST00000141557 PtpruB1AUH1 1446 aa9.6□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Scaf11E9PZM7 1456 aaKnown RBP9.6□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Col22a1E9Q7P1 1613 aa9.6□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Brwd3A2AHJ4 1799 aa9.59□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Ubr2Q6WKZ8 1755 aa9.59□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Eid3Q3V124 375 aa9.59□□□□□ -0.87
Trappc13-203ENSMUST00000141557 PzpQ61838 1495 aa9.59□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Nrxn3Q6P9K9 1571 aa9.59□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Kank1E9Q238 1360 aa9.59□□□□□ -0.87
Trappc13-203ENSMUST00000141557 Lemd3Q9WU40 921 aa9.57□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Bcl9lQ67FY2 1494 aa9.57□□□□□ -0.88
Trappc13-203ENSMUST00000141557 PrxO55103 1391 aa9.57□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Cdk12Q14AX6 1484 aaKnown RBP9.56□□□□□ -0.88
Trappc13-203ENSMUST00000141557 C3P01027 1663 aa9.56□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Abcc10Q8R4P9 1501 aa9.56□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Shank3Q4ACU6 1730 aa9.55□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Rrp7aQ9D1C9 280 aaKnown RBP9.55□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Ppargc1bQ8VHJ7 1014 aa9.54□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Scaf1Q5U4C3 1256 aaKnown RBP9.53□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Sipa1l3G3X9J0 1776 aa9.53□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Ltbp4Q8K4G1 1666 aa9.53□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Usp19Q3UJD6 1360 aa9.53□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Rundc1Q0VDN7 615 aa9.53□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Sirt1Q923E4 737 aa9.53□□□□□ -0.88
Trappc13-203ENSMUST00000141557 Nfat5Q9WV30 1534 aa9.52□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Atp7bQ64446 1462 aa9.52□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Slc4a2P13808 1237 aaKnown RBP9.52□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Nid2O88322 1403 aa9.51□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Dlg5E9Q9R9 1921 aa9.51□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Scn4aQ9ER60 1841 aa9.49□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Card11Q8CIS0 1159 aa9.48□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Sin3aQ60520 1274 aaKnown RBP9.47□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Kiaa1107Q80TK0 1369 aa9.47□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Rab3gap2Q8BMG7 1366 aa9.47□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Ahnak2E9PYB0 1738 aaKnown RBP9.47□□□□□ -0.89
Trappc13-203ENSMUST00000141557 Nop58Q6DFW4 536 aaKnown RBP9.47□□□□□ -0.89
Trappc13-203ENSMUST00000141557 IbtkQ6ZPR6 1352 aaKnown RBP9.46□□□□□ -0.89
Trappc13-203ENSMUST00000141557 CemipQ8BI06 1361 aa9.45□□□□□ -0.9
Trappc13-203ENSMUST00000141557 Kat6bQ8BRB7 1872 aa9.45□□□□□ -0.9
Trappc13-203ENSMUST00000141557 Znf335A2A5K6 1337 aa9.45□□□□□ -0.9
Trappc13-203ENSMUST00000141557 Tjp1P39447 1745 aaKnown RBP9.45□□□□□ -0.9
Trappc13-203ENSMUST00000141557 Sall3Q62255 1320 aa9.43□□□□□ -0.9
Trappc13-203ENSMUST00000141557 Kif3bQ61771 747 aa9.42□□□□□ -0.9
Trappc13-203ENSMUST00000141557 Znf521Q6KAS7 1311 aa9.4□□□□□ -0.9
Trappc13-203ENSMUST00000141557 Abca3Q8R420 1704 aa9.39□□□□□ -0.91
Trappc13-203ENSMUST00000141557 DccP70211 1447 aa9.39□□□□□ -0.91
Trappc13-203ENSMUST00000141557 IghaA0A0A6YXW6 389 aa9.39□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Erbb3Q61526 1339 aa9.38□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Aplp2Q06335 707 aa9.38□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Zscan10Q3URR7 782 aa9.38□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Tnnt3Q9QZ47 272 aa9.38□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Stra8P70278 393 aa9.38□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Kndc1Q0KK55 1742 aa9.38□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Map4k4P97820 1233 aaKnown RBP9.38□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Rgl3Q3UYI5 709 aa9.37□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Nup153E9Q3G8 1462 aaKnown RBP9.37□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Tmf1B9EKI3 1091 aa9.36□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Zfp142G5E869 1843 aa9.36□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Rad17Q6NXW6 688 aa9.35□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Phrf1A6H619 1682 aa9.35□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Ifit1bl1D3Z6F0 470 aa9.35□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Fam184bQ0KK56 942 aa9.35□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Lrp6O88572 1613 aa9.35□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Ttbk1Q6PCN3 1308 aa9.35□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Srcin1Q9QWI6 1250 aa9.34□□□□□ -0.91
Trappc13-203ENSMUST00000141557 Ppp2r1aQ76MZ3 589 aa9.33□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Exoc6Q8R313 802 aa9.33□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Puf60Q3UEB3 564 aaKnown RBP9.33□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Trim28Q62318 834 aa9.33□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Dnajc5P60904 198 aa9.32□□□□□ -0.92
Trappc13-203ENSMUST00000141557 P2rx7Q9Z1M0 595 aa9.32□□□□□ -0.92
Trappc13-203ENSMUST00000141557 AampJ3QN89 436 aa9.32□□□□□ -0.92
Trappc13-203ENSMUST00000141557 PaskQ8CEE6 1383 aa9.32□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Hoxb7P09024 217 aa9.31□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Nwd2Q6P5U7 1742 aa9.3□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Dnajc5gQ8C632 165 aa9.3□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Wdr66E9Q743 1299 aa9.3□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Mroh3A0A1D5RM54 893 aa9.29□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Pank3Q8R2W9 370 aa9.29□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Arap2Q8BZ05 1703 aa9.29□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Astn2Q80Z10 1352 aa9.29□□□□□ -0.92
Trappc13-203ENSMUST00000141557 CenpjQ569L8 1344 aa9.28□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Uspl1Q3ULM6 1089 aa9.28□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Usp40Q8BWR4 1235 aa9.28□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Rpgrip1lQ8CG73 1264 aa9.28□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Parp14Q2EMV9 1817 aa9.28□□□□□ -0.92
Trappc13-203ENSMUST00000141557 Fkbp15Q6P9Q6 1216 aaKnown RBP9.27□□□□□ -0.93
Trappc13-203ENSMUST00000141557 Arid3cA6PWV5 409 aa9.26□□□□□ -0.93
Trappc13-203ENSMUST00000141557 Gtf2e1Q9D0D5 440 aa9.26□□□□□ -0.93
Trappc13-203ENSMUST00000141557 Uhrf1bp1lA2RSJ4 1457 aa9.26□□□□□ -0.93
Trappc13-203ENSMUST00000141557 Kdm2bQ6P1G2 1309 aa9.26□□□□□ -0.93
Trappc13-203ENSMUST00000141557 Plekhh1Q80TI1 1356 aa9.26□□□□□ -0.93
Trappc13-203ENSMUST00000141557 Tiam2Q6ZPF3 1715 aa9.26□□□□□ -0.93
Trappc13-203ENSMUST00000141557 Zscan21Q07231 555 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms