RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Q7TT23 1179 aa34.65■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Utp14aQ640M1 767 aaKnown RBP34.65■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Kif7B7ZNG0 1348 aa34.63■■■■□ 3.13
Tpm1-216ENSMUST00000113707 Psme1P97371 249 aa34.63■■■■□ 3.13
Tpm1-216ENSMUST00000113707 Txndc2Q6P902 515 aa34.63■■■■□ 3.13
Tpm1-216ENSMUST00000113707 Cnga1P29974 684 aa34.62■■■■□ 3.13
Tpm1-216ENSMUST00000113707 Dcaf11Q91VU6 549 aa34.61■■■■□ 3.13
Tpm1-216ENSMUST00000113707 Pcdh10E9PXQ7 1057 aa34.58■■■■□ 3.13
Tpm1-216ENSMUST00000113707 Csrnp3P59055 597 aa34.57■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Dip2bQ3UH60 1574 aa34.56■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Mink1Q9JM52 1308 aa34.56■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Exosc9Q9JHI7 438 aaKnown RBP34.53■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Abca14E9Q8F8 1683 aa34.52■■■■□ 3.12
Tpm1-216ENSMUST00000113707 KdrP35918 1367 aa34.52■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Atf7ipQ7TT18 1306 aa34.52■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Ofd1Q80Z25 1017 aa34.51■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Atp2b2Q9R0K7 1198 aa34.51■■■■□ 3.12
Tpm1-216ENSMUST00000113707 Asxl2Q8BZ32 1370 aa34.49■■■■□ 3.11
Tpm1-216ENSMUST00000113707 Mak16Q8BGS0 296 aaKnown RBP34.49■■■■□ 3.11
Tpm1-216ENSMUST00000113707 Slit3Q9WVB4 1523 aa34.48■■■■□ 3.11
Tpm1-216ENSMUST00000113707 Gsto1O09131 240 aa34.47■■■■□ 3.11
Tpm1-216ENSMUST00000113707 Nrxn1Q9CS84 1514 aa34.45■■■■□ 3.11
Tpm1-216ENSMUST00000113707 Nwd1A6H603 1563 aa34.44■■■■□ 3.1
Tpm1-216ENSMUST00000113707 Cdk19Q8BWD8 501 aa34.44■■■■□ 3.1
Tpm1-216ENSMUST00000113707 NktrP30415 1453 aa34.43■■■■□ 3.1
Tpm1-216ENSMUST00000113707 Nlrp6Q91WS2 869 aa34.39■■■■□ 3.1
Tpm1-216ENSMUST00000113707 Bcl9Q9D219 1425 aa34.39■■■■□ 3.1
Tpm1-216ENSMUST00000113707 Eif5bQ05D44 1216 aaKnown RBP34.38■■■■□ 3.09
Tpm1-216ENSMUST00000113707 PzpQ61838 1495 aa34.37■■■■□ 3.09
Tpm1-216ENSMUST00000113707 IghaA0A0A6YXW6 389 aa34.37■■■■□ 3.09
Tpm1-216ENSMUST00000113707 FanciQ8K368 1330 aa34.37■■■■□ 3.09
Tpm1-216ENSMUST00000113707 Prdm10Q3UTQ7 1184 aa34.36■■■■□ 3.09
Tpm1-216ENSMUST00000113707 4930407I10RikD3Z5T8 1512 aa34.34■■■■□ 3.09
Tpm1-216ENSMUST00000113707 Cps1Q8C196 1500 aa34.34■■■■□ 3.09
Tpm1-216ENSMUST00000113707 Adgrl1Q80TR1 1466 aa34.34■■■■□ 3.09
Tpm1-216ENSMUST00000113707 Scaf11E9PZM7 1456 aaKnown RBP34.33■■■■□ 3.09
Tpm1-216ENSMUST00000113707 Pik3r4Q8VD65 1358 aa34.33■■■■□ 3.09
Tpm1-216ENSMUST00000113707 Zranb1Q7M760 708 aa34.33■■■■□ 3.09
Tpm1-216ENSMUST00000113707 Esx1O88933 382 aa34.29■■■■□ 3.08
Tpm1-216ENSMUST00000113707 Arap3Q8R5G7 1538 aa34.28■■■■□ 3.08
Tpm1-216ENSMUST00000113707 Lmtk3Q5XJV6 1424 aa34.27■■■■□ 3.08
Tpm1-216ENSMUST00000113707 Cald1E9QA15 768 aaKnown RBP34.25■■■■□ 3.07
Tpm1-216ENSMUST00000113707 Zfp444Q3TDV8 331 aaKnown RBP34.25■■■■□ 3.07
Tpm1-216ENSMUST00000113707 Calr4Q3TQS0 420 aa34.23■■■■□ 3.07
Tpm1-216ENSMUST00000113707 GphnQ8BUV3 769 aaKnown RBP34.23■■■■□ 3.07
Tpm1-216ENSMUST00000113707 MyclP10166 368 aa34.22■■■■□ 3.07
Tpm1-216ENSMUST00000113707 IbtkQ6ZPR6 1352 aaKnown RBP34.21■■■■□ 3.07
Tpm1-216ENSMUST00000113707 HnrnpmQ9D0E1 729 aaKnown RBP34.19■■■■□ 3.06
Tpm1-216ENSMUST00000113707 Usp32F8VPZ3 1604 aa34.19■■■■□ 3.06
Tpm1-216ENSMUST00000113707 Map3k19E9Q3S4 1311 aa34.18■■■■□ 3.06
Tpm1-216ENSMUST00000113707 NinlQ6ZQ12 1394 aa34.18■■■■□ 3.06
Tpm1-216ENSMUST00000113707 Kiaa1107Q80TK0 1369 aa34.17■■■■□ 3.06
Tpm1-216ENSMUST00000113707 Aplp2Q06335 707 aa34.15■■■■□ 3.06
Tpm1-216ENSMUST00000113707 Rad21Q61550 635 aaKnown RBP34.13■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Idi2Q8BFZ6 227 aa34.12■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Pik3c2bE9QAN8 1632 aa34.12■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Alpk3Q924C5 1678 aa34.12■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Kank1E9Q238 1360 aa34.11■■■■□ 3.05
Tpm1-216ENSMUST00000113707 L3mbtl2P59178 703 aa34.11■■■■□ 3.05
Tpm1-216ENSMUST00000113707 PtpruB1AUH1 1446 aa34.1■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Sirt1Q923E4 737 aa34.1■■■■□ 3.05
Tpm1-216ENSMUST00000113707 P2rx7Q9Z1M0 595 aa34.1■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Topaz1E5FYH1 1653 aa34.1■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Kif16bB1AVY7 1312 aa34.09■■■■□ 3.05
Tpm1-216ENSMUST00000113707 GsdmaQ9EST1 446 aa34.09■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Rreb1Q3UH06 1700 aaKnown RBP34.08■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Golga2Q921M4 999 aa34.07■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Usp19Q3UJD6 1360 aa34.07■■■■□ 3.05
Tpm1-216ENSMUST00000113707 Tnrc6bQ8BKI2 1810 aaKnown RBP34.07■■■■□ 3.04
Tpm1-216ENSMUST00000113707 Upf2A2AT37 1269 aaKnown RBP34.07■■■■□ 3.04
Tpm1-216ENSMUST00000113707 CrbnQ8C7D2 445 aa34.07■■■■□ 3.04
Tpm1-216ENSMUST00000113707 Q3UJC8 639 aa34.05■■■■□ 3.04
Tpm1-216ENSMUST00000113707 Map4k4P97820 1233 aaKnown RBP34.04■■■■□ 3.04
Tpm1-216ENSMUST00000113707 MlecQ6ZQI3 291 aaKnown RBP34.02■■■■□ 3.04
Tpm1-216ENSMUST00000113707 CatipB9EKE5 520 aa33.99■■■■□ 3.03
Tpm1-216ENSMUST00000113707 SafbD3YXK2 937 aaKnown RBP33.99■■■■□ 3.03
Tpm1-216ENSMUST00000113707 Znf316Q6PGE4 1016 aa33.99■■■■□ 3.03
Tpm1-216ENSMUST00000113707 Uspl1Q3ULM6 1089 aa33.97■■■■□ 3.03
Tpm1-216ENSMUST00000113707 Kif20bQ80WE4 1774 aaKnown RBP33.96■■■■□ 3.03
Tpm1-216ENSMUST00000113707 D430041D05RikF6ZGR6 1678 aa33.96■■■■□ 3.03
Tpm1-216ENSMUST00000113707 Erbb3Q61526 1339 aa33.95■■■■□ 3.03
Tpm1-216ENSMUST00000113707 Speer4f1Q9D5Q6 258 aa33.95■■■■□ 3.02
Tpm1-216ENSMUST00000113707 N4bp2F8VQG7 1678 aaKnown RBP33.93■■■■□ 3.02
Tpm1-216ENSMUST00000113707 Kif1aP33173 1695 aa33.93■■■■□ 3.02
Tpm1-216ENSMUST00000113707 Ttc41Q692V3 1318 aa33.92■■■■□ 3.02
Tpm1-216ENSMUST00000113707 Tsen2Q6P7W5 460 aa33.92■■■■□ 3.02
Tpm1-216ENSMUST00000113707 1700123L14RikQ3V2K7 440 aa33.9■■■■□ 3.02
Tpm1-216ENSMUST00000113707 Ralbp1Q62172 648 aa33.89■■■■□ 3.02
Tpm1-216ENSMUST00000113707 Rimbp3Q3V0F0 1606 aa33.89■■■■□ 3.01
Tpm1-216ENSMUST00000113707 Rims2Q9EQZ7 1530 aa33.88■■■■□ 3.01
Tpm1-216ENSMUST00000113707 U2af1Q9D883 239 aaKnown RBP33.88■■■■□ 3.01
Tpm1-216ENSMUST00000113707 Iqsec2Q5DU25 1478 aa33.87■■■■□ 3.01
Tpm1-216ENSMUST00000113707 C5P06684 1680 aa33.86■■■■□ 3.01
Tpm1-216ENSMUST00000113707 Znf335A2A5K6 1337 aa33.86■■■■□ 3.01
Tpm1-216ENSMUST00000113707 Trim28Q62318 834 aa33.85■■■■□ 3.01
Tpm1-216ENSMUST00000113707 Als2Q920R0 1651 aa33.85■■■■□ 3.01
Tpm1-216ENSMUST00000113707 Ccdc30Q8BVF4 654 aa33.84■■■■□ 3.01
Tpm1-216ENSMUST00000113707 Abcc10Q8R4P9 1501 aa33.81■■■■□ 3
Tpm1-216ENSMUST00000113707 Ncbp3Q8BZR9 615 aaKnown RBP33.81■■■■□ 3
Tpm1-216ENSMUST00000113707 Hoxb7P09024 217 aa33.8■■■■□ 3
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms