RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Tex14Q7M6U3 1450 aa26.2■■□□□ 1.78
Usf3-201ENSMUST00000088356 Ppip5k1A2ARP1 1436 aa26.2■■□□□ 1.78
Usf3-201ENSMUST00000088356 Dhx9O70133 1380 aaKnown RBP26.19■■□□□ 1.78
Usf3-201ENSMUST00000088356 MaddQ80U28 1577 aa26.17■■□□□ 1.78
Usf3-201ENSMUST00000088356 Gm10563F6WIE4 79 aa26.17■■□□□ 1.78
Usf3-201ENSMUST00000088356 Eno4Q8C042 619 aa26.15■■□□□ 1.78
Usf3-201ENSMUST00000088356 UbtfP25976 765 aaKnown RBP26.14■■□□□ 1.78
Usf3-201ENSMUST00000088356 Farp2Q91VS8 1065 aa26.12■■□□□ 1.77
Usf3-201ENSMUST00000088356 Robo1O89026 1612 aa26.12■■□□□ 1.77
Usf3-201ENSMUST00000088356 D430041D05RikF6ZGR6 1678 aa26.11■■□□□ 1.77
Usf3-201ENSMUST00000088356 Kcna6Q61923 529 aa26.1■■□□□ 1.77
Usf3-201ENSMUST00000088356 Mia2Q91ZV0 1396 aa26.07■■□□□ 1.76
Usf3-201ENSMUST00000088356 Ddx54Q8K4L0 874 aaKnown RBP26.06■■□□□ 1.76
Usf3-201ENSMUST00000088356 Usp32F8VPZ3 1604 aa26.05■■□□□ 1.76
Usf3-201ENSMUST00000088356 Fam135bQ9DAI6 1403 aa26.05■■□□□ 1.76
Usf3-201ENSMUST00000088356 Q3UJC8 639 aa26.04■■□□□ 1.76
Usf3-201ENSMUST00000088356 Arhgef1Q61210 920 aaKnown RBP26.04■■□□□ 1.76
Usf3-201ENSMUST00000088356 Acsbg1Q99PU5 721 aa26.04■■□□□ 1.76
Usf3-201ENSMUST00000088356 C5P06684 1680 aa26■■□□□ 1.75
Usf3-201ENSMUST00000088356 Stk26Q99JT2 416 aa25.99■■□□□ 1.75
Usf3-201ENSMUST00000088356 Kif1aP33173 1695 aa25.97■■□□□ 1.75
Usf3-201ENSMUST00000088356 Utp14aQ640M1 767 aaKnown RBP25.97■■□□□ 1.75
Usf3-201ENSMUST00000088356 Ccdc6D3YZP9 469 aa25.96■■□□□ 1.75
Usf3-201ENSMUST00000088356 InhbeO08717 350 aa25.96■■□□□ 1.75
Usf3-201ENSMUST00000088356 Atp7bQ64446 1462 aa25.96■■□□□ 1.75
Usf3-201ENSMUST00000088356 Lrrc59Q922Q8 307 aaKnown RBP25.95■■□□□ 1.74
Usf3-201ENSMUST00000088356 Als2Q920R0 1651 aa25.95■■□□□ 1.74
Usf3-201ENSMUST00000088356 Sgsm1Q8BPQ7 1093 aa25.94■■□□□ 1.74
Usf3-201ENSMUST00000088356 Dot1lQ6XZL8 1540 aa25.93■■□□□ 1.74
Usf3-201ENSMUST00000088356 Camta1A2A891 1682 aa25.93■■□□□ 1.74
Usf3-201ENSMUST00000088356 Tnrc6cQ3UHC0 1690 aaKnown RBP25.93■■□□□ 1.74
Usf3-201ENSMUST00000088356 Mroh3A0A1D5RM54 893 aa25.92■■□□□ 1.74
Usf3-201ENSMUST00000088356 Rims1Q99NE5 1463 aa25.91■■□□□ 1.74
Usf3-201ENSMUST00000088356 Tnks1bp1P58871 1720 aa25.91■■□□□ 1.74
Usf3-201ENSMUST00000088356 Cep170bQ80U49 1574 aa25.91■■□□□ 1.74
Usf3-201ENSMUST00000088356 Psrc1Q9D0P7 329 aa25.91■■□□□ 1.74
Usf3-201ENSMUST00000088356 Sox12Q04890 314 aa25.89■■□□□ 1.74
Usf3-201ENSMUST00000088356 Tmem2Q5FWI3 1383 aa25.89■■□□□ 1.74
Usf3-201ENSMUST00000088356 Atp10bB1AWN4 1474 aa25.88■■□□□ 1.73
Usf3-201ENSMUST00000088356 Mphosph9A6H5Y1 991 aa25.88■■□□□ 1.73
Usf3-201ENSMUST00000088356 Ltbp1Q8CG19 1712 aa25.83■■□□□ 1.73
Usf3-201ENSMUST00000088356 Idi1P58044 227 aa25.83■■□□□ 1.73
Usf3-201ENSMUST00000088356 Hdac5Q9Z2V6 1113 aa25.83■■□□□ 1.73
Usf3-201ENSMUST00000088356 Grwd1Q810D6 446 aaKnown RBP25.82■■□□□ 1.72
Usf3-201ENSMUST00000088356 PtpruB1AUH1 1446 aa25.81■■□□□ 1.72
Usf3-201ENSMUST00000088356 Sugp2Q8CH09 1067 aa25.81■■□□□ 1.72
Usf3-201ENSMUST00000088356 Washc2Q6PGL7 1334 aa25.81■■□□□ 1.72
Usf3-201ENSMUST00000088356 Abca15E9PWH4 1668 aa25.8■■□□□ 1.72
Usf3-201ENSMUST00000088356 VirmaA2AIV2 1811 aaKnown RBP25.8■■□□□ 1.72
Usf3-201ENSMUST00000088356 Slc52a2Q9D8F3 450 aa25.8■■□□□ 1.72
Usf3-201ENSMUST00000088356 Tulp4Q9JIL5 1547 aa25.79■■□□□ 1.72
Usf3-201ENSMUST00000088356 Cadps2Q8BYR5 1297 aa25.79■■□□□ 1.72
Usf3-201ENSMUST00000088356 Adamtsl1Q8BLI0 1745 aa25.77■■□□□ 1.72
Usf3-201ENSMUST00000088356 Sirt1Q923E4 737 aa25.76■■□□□ 1.71
Usf3-201ENSMUST00000088356 Shank2Q80Z38 1476 aa25.75■■□□□ 1.71
Usf3-201ENSMUST00000088356 Lrrc7Q80TE7 1490 aa25.74■■□□□ 1.71
Usf3-201ENSMUST00000088356 Pkd2O35245 966 aa25.73■■□□□ 1.71
Usf3-201ENSMUST00000088356 Wdr17E9Q271 1322 aa25.72■■□□□ 1.71
Usf3-201ENSMUST00000088356 Sf3b2Q3UJB0 878 aaKnown RBP25.72■■□□□ 1.71
Usf3-201ENSMUST00000088356 Fan1Q69ZT1 1020 aa25.72■■□□□ 1.71
Usf3-201ENSMUST00000088356 NgefQ8CHT1 710 aa25.71■■□□□ 1.71
Usf3-201ENSMUST00000088356 Abca14E9Q8F8 1683 aa25.71■■□□□ 1.71
Usf3-201ENSMUST00000088356 Acin1Q9JIX8 1338 aaKnown RBP25.7■■□□□ 1.71
Usf3-201ENSMUST00000088356 Ubap1lG3UW59 384 aa25.7■■□□□ 1.7
Usf3-201ENSMUST00000088356 Kdm2aP59997 1161 aa25.7■■□□□ 1.7
Usf3-201ENSMUST00000088356 Cdk5rap2Q8K389 1822 aa25.68■■□□□ 1.7
Usf3-201ENSMUST00000088356 Kiaa0319Q5SZV5 1081 aa25.68■■□□□ 1.7
Usf3-201ENSMUST00000088356 OscarQ8VBT3 265 aa25.68■■□□□ 1.7
Usf3-201ENSMUST00000088356 Plekhg1F6S200 1446 aa25.67■■□□□ 1.7
Usf3-201ENSMUST00000088356 Os9Q8K2C7 672 aa25.67■■□□□ 1.7
Usf3-201ENSMUST00000088356 Adamts13Q769J6 1426 aa25.66■■□□□ 1.7
Usf3-201ENSMUST00000088356 Puf60Q3UEB3 564 aaKnown RBP25.66■■□□□ 1.7
Usf3-201ENSMUST00000088356 Nfat5Q9WV30 1534 aa25.66■■□□□ 1.7
Usf3-201ENSMUST00000088356 Pola1P33609 1465 aa25.66■■□□□ 1.7
Usf3-201ENSMUST00000088356 Cdhr2E9Q7P9 1308 aa25.65■■□□□ 1.7
Usf3-201ENSMUST00000088356 Srpk2O54781 681 aaKnown RBP25.65■■□□□ 1.7
Usf3-201ENSMUST00000088356 Cacna1sQ02789 1880 aa25.64■■□□□ 1.7
Usf3-201ENSMUST00000088356 Ly75Q60767 1723 aa25.64■■□□□ 1.7
Usf3-201ENSMUST00000088356 Dixdc1Q80Y83 711 aa25.64■■□□□ 1.7
Usf3-201ENSMUST00000088356 Cep152A2AUM9 1736 aaKnown RBP25.63■■□□□ 1.69
Usf3-201ENSMUST00000088356 Txnrd1Q9JMH6 613 aa25.63■■□□□ 1.69
Usf3-201ENSMUST00000088356 Ap3b2Q9JME5 1082 aa25.61■■□□□ 1.69
Usf3-201ENSMUST00000088356 Nrxn1Q9CS84 1514 aa25.61■■□□□ 1.69
Usf3-201ENSMUST00000088356 Slc35g1Q8BY79 368 aa25.59■■□□□ 1.69
Usf3-201ENSMUST00000088356 Atp2b2Q9R0K7 1198 aa25.58■■□□□ 1.69
Usf3-201ENSMUST00000088356 Col16a1Q8BLX7 1580 aa25.57■■□□□ 1.68
Usf3-201ENSMUST00000088356 Ifit1bl1D3Z6F0 470 aa25.57■■□□□ 1.68
Usf3-201ENSMUST00000088356 Mink1Q9JM52 1308 aa25.57■■□□□ 1.68
Usf3-201ENSMUST00000088356 Polr3aB2RXC6 1390 aa25.56■■□□□ 1.68
Usf3-201ENSMUST00000088356 Ccdc129Q14B48 1034 aa25.55■■□□□ 1.68
Usf3-201ENSMUST00000088356 Rtl5Q5DTT4 599 aa25.55■■□□□ 1.68
Usf3-201ENSMUST00000088356 Rock1P70335 1354 aa25.55■■□□□ 1.68
Usf3-201ENSMUST00000088356 Zmym3Q9JLM4 1370 aa25.55■■□□□ 1.68
Usf3-201ENSMUST00000088356 Znf316Q6PGE4 1016 aa25.54■■□□□ 1.68
Usf3-201ENSMUST00000088356 Nup153E9Q3G8 1462 aaKnown RBP25.53■■□□□ 1.68
Usf3-201ENSMUST00000088356 Slc34a2Q9DBP0 697 aa25.53■■□□□ 1.68
Usf3-201ENSMUST00000088356 Fyb1O35601 819 aa25.52■■□□□ 1.68
Usf3-201ENSMUST00000088356 Sipa1l1Q8C0T5 1782 aa25.51■■□□□ 1.67
Usf3-201ENSMUST00000088356 PaskQ8CEE6 1383 aa25.5■■□□□ 1.67
Usf3-201ENSMUST00000088356 Fer1l6E0CZ42 1862 aa25.49■■□□□ 1.67
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms