RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Gm35339A0A140LHH9 1649 aa41.97■■■■■ 4.31
Usf3-201ENSMUST00000088356 NischQ80TM9 1593 aa40.99■■■■■ 4.15
Usf3-201ENSMUST00000088356 Abcc9P70170 1546 aa40.11■■■■■ 4.01
Usf3-201ENSMUST00000088356 Abcc8B2RUS7 1588 aa39.9■■■■□ 3.98
Usf3-201ENSMUST00000088356 ScribQ80U72 1612 aa39.15■■■■□ 3.86
Usf3-201ENSMUST00000088356 NacadQ5SWP3 1504 aa37.62■■■■□ 3.61
Usf3-201ENSMUST00000088356 Kdm5dQ62240 1548 aa37.57■■■■□ 3.61
Usf3-201ENSMUST00000088356 Dnajc5bQ9CQ94 199 aa37.1■■■■□ 3.53
Usf3-201ENSMUST00000088356 Sycp2Q9CUU3 1500 aa36.97■■■■□ 3.51
Usf3-201ENSMUST00000088356 BicraF8VPZ9 1578 aa36.7■■■■□ 3.47
Usf3-201ENSMUST00000088356 Dcaf1Q80TR8 1506 aa36.5■■■■□ 3.43
Usf3-201ENSMUST00000088356 Thoc2B1AZI6 1594 aaKnown RBP35.9■■■■□ 3.34
Usf3-201ENSMUST00000088356 Pds5bQ4VA53 1446 aaKnown RBP35.7■■■■□ 3.31
Usf3-201ENSMUST00000088356 Rb1cc1Q9ESK9 1588 aa35.69■■■■□ 3.3
Usf3-201ENSMUST00000088356 Cc2d2aQ8CFW7 1633 aa35.28■■■■□ 3.24
Usf3-201ENSMUST00000088356 Atad2bE9Q166 1460 aaKnown RBP35.21■■■■□ 3.23
Usf3-201ENSMUST00000088356 Baz1aO88379 1555 aa35.06■■■■□ 3.2
Usf3-201ENSMUST00000088356 Ercc6F8VPZ5 1481 aa34.98■■■■□ 3.19
Usf3-201ENSMUST00000088356 Crybg2B7ZCC2 1516 aa34.91■■■■□ 3.18
Usf3-201ENSMUST00000088356 Fam135aQ6NS59 1506 aa34.86■■■■□ 3.17
Usf3-201ENSMUST00000088356 Ccdc180J3QNE4 1664 aa34.84■■■■□ 3.17
Usf3-201ENSMUST00000088356 Smarca2Q6DIC0 1577 aa34.75■■■■□ 3.15
Usf3-201ENSMUST00000088356 Zcchc6Q5BLK4 1491 aaKnown RBP34.75■■■■□ 3.15
Usf3-201ENSMUST00000088356 Smarca4Q3TKT4 1613 aaKnown RBP34.61■■■■□ 3.13
Usf3-201ENSMUST00000088356 Iqgap2Q3UQ44 1575 aa34.58■■■■□ 3.13
Usf3-201ENSMUST00000088356 Rhox8Q6VSS7 320 aa34.47■■■■□ 3.11
Usf3-201ENSMUST00000088356 Wdr62Q3U3T8 1523 aa34.42■■■■□ 3.1
Usf3-201ENSMUST00000088356 Frmpd1A2AKB4 1549 aa34.37■■■■□ 3.09
Usf3-201ENSMUST00000088356 Dnajc5P60904 198 aa34.36■■■■□ 3.09
Usf3-201ENSMUST00000088356 Phldb1Q6PDH0 1371 aaKnown RBP34.3■■■■□ 3.08
Usf3-201ENSMUST00000088356 Cecr2E9Q2Z1 1453 aa34.29■■■■□ 3.08
Usf3-201ENSMUST00000088356 Baz1bQ9Z277 1479 aa34.22■■■■□ 3.07
Usf3-201ENSMUST00000088356 Ubl4bQ9CQ84 188 aa34.03■■■■□ 3.04
Usf3-201ENSMUST00000088356 Mrc2Q64449 1479 aa34.01■■■■□ 3.04
Usf3-201ENSMUST00000088356 Trim41Q5NCC3 630 aa34.01■■■■□ 3.03
Usf3-201ENSMUST00000088356 Unc13aQ4KUS2 1712 aa33.99■■■■□ 3.03
Usf3-201ENSMUST00000088356 Lrriq1Q0P5X1 1673 aa33.43■■■□□ 2.94
Usf3-201ENSMUST00000088356 Cttnbp2B9EJA2 1648 aa33.28■■■□□ 2.92
Usf3-201ENSMUST00000088356 CftrP26361 1476 aa33.27■■■□□ 2.92
Usf3-201ENSMUST00000088356 Synj1Q8CHC4 1574 aa33.18■■■□□ 2.9
Usf3-201ENSMUST00000088356 Rsf1E9PWW9 1441 aaKnown RBP33.18■■■□□ 2.9
Usf3-201ENSMUST00000088356 Kif21aQ9QXL2 1672 aa33.07■■■□□ 2.88
Usf3-201ENSMUST00000088356 Cux2P70298 1426 aa33.01■■■□□ 2.87
Usf3-201ENSMUST00000088356 Shroom2A2ALU4 1481 aa32.97■■■□□ 2.87
Usf3-201ENSMUST00000088356 Eif4g3Q80XI3 1579 aaKnown RBP32.91■■■□□ 2.86
Usf3-201ENSMUST00000088356 Brd4Q9ESU6 1400 aaKnown RBP32.84■■■□□ 2.85
Usf3-201ENSMUST00000088356 Kif15Q6P9L6 1387 aa32.81■■■□□ 2.84
Usf3-201ENSMUST00000088356 Col17a1Q07563 1470 aa32.74■■■□□ 2.83
Usf3-201ENSMUST00000088356 Rtl1Q7M732 1744 aa32.63■■■□□ 2.81
Usf3-201ENSMUST00000088356 Esf1Q3V1V3 845 aaKnown RBP32.54■■■□□ 2.8
Usf3-201ENSMUST00000088356 Lamc3Q9R0B6 1581 aa32.52■■■□□ 2.8
Usf3-201ENSMUST00000088356 Npm1Q61937 292 aaKnown RBP32.49■■■□□ 2.79
Usf3-201ENSMUST00000088356 Urb2E9Q7L1 1524 aaKnown RBP32.46■■■□□ 2.79
Usf3-201ENSMUST00000088356 Top2bQ64511 1612 aa32.44■■■□□ 2.78
Usf3-201ENSMUST00000088356 Ccdc136Q3TVA9 1136 aa32.44■■■□□ 2.78
Usf3-201ENSMUST00000088356 Pabpn1Q8CCS6 302 aaKnown RBP32.4■■■□□ 2.78
Usf3-201ENSMUST00000088356 Cep164Q5DU05 1446 aa32.35■■■□□ 2.77
Usf3-201ENSMUST00000088356 Plb1Q3TTY0 1478 aa32.34■■■□□ 2.77
Usf3-201ENSMUST00000088356 Dhx29Q6PGC1 1365 aaKnown RBP32.24■■■□□ 2.75
Usf3-201ENSMUST00000088356 Pelp1Q9DBD5 1123 aaKnown RBP32.19■■■□□ 2.74
Usf3-201ENSMUST00000088356 Zcchc11B2RX14 1644 aaKnown RBP32.11■■■□□ 2.73
Usf3-201ENSMUST00000088356 Crocc2F6XLV1 1638 aa32.11■■■□□ 2.73
Usf3-201ENSMUST00000088356 Rusc2Q80U22 1514 aa32.1■■■□□ 2.73
Usf3-201ENSMUST00000088356 Il27Q8K3I6 234 aa32.04■■■□□ 2.72
Usf3-201ENSMUST00000088356 LrpprcQ6PB66 1392 aaKnown RBP31.98■■■□□ 2.71
Usf3-201ENSMUST00000088356 Ccdc18Q640L5 1455 aa31.97■■■□□ 2.71
Usf3-201ENSMUST00000088356 Ift140E9PY46 1464 aa31.93■■■□□ 2.7
Usf3-201ENSMUST00000088356 TnnQ80Z71 1560 aa31.9■■■□□ 2.7
Usf3-201ENSMUST00000088356 Pcdh10E9PXQ7 1057 aa31.9■■■□□ 2.7
Usf3-201ENSMUST00000088356 Camsap1A2AHC3 1581 aa31.87■■■□□ 2.69
Usf3-201ENSMUST00000088356 Arhgef5E9Q7D5 1581 aa31.77■■■□□ 2.68
Usf3-201ENSMUST00000088356 PogzQ8BZH4 1409 aaKnown RBP31.75■■■□□ 2.67
Usf3-201ENSMUST00000088356 Adgrl3Q80TS3 1537 aa31.68■■■□□ 2.66
Usf3-201ENSMUST00000088356 Setd1bQ8CFT2 1985 aa31.61■■■□□ 2.65
Usf3-201ENSMUST00000088356 Disp1Q3TDN0 1521 aa31.61■■■□□ 2.65
Usf3-201ENSMUST00000088356 Duox2A2AQ99 1517 aa31.58■■■□□ 2.65
Usf3-201ENSMUST00000088356 Ttbk1Q6PCN3 1308 aa31.56■■■□□ 2.64
Usf3-201ENSMUST00000088356 Cep170Q6A065 1588 aa31.51■■■□□ 2.64
Usf3-201ENSMUST00000088356 PtprkP35822 1457 aa31.49■■■□□ 2.63
Usf3-201ENSMUST00000088356 Golga3P55937 1487 aa31.49■■■□□ 2.63
Usf3-201ENSMUST00000088356 Nup160Q9Z0W3 1402 aaKnown RBP31.49■■■□□ 2.63
Usf3-201ENSMUST00000088356 Pbrm1Q8BSQ9 1634 aaKnown RBP31.44■■■□□ 2.62
Usf3-201ENSMUST00000088356 Samd9lQ69Z37 1561 aa31.43■■■□□ 2.62
Usf3-201ENSMUST00000088356 Cc2d2bA0A286YDU8 1405 aa31.43■■■□□ 2.62
Usf3-201ENSMUST00000088356 PtprtQ99M80 1454 aa31.41■■■□□ 2.62
Usf3-201ENSMUST00000088356 Gapvd1Q6PAR5 1458 aa31.4■■■□□ 2.62
Usf3-201ENSMUST00000088356 Gm156Q58A37 223 aa31.38■■■□□ 2.61
Usf3-201ENSMUST00000088356 Cngb1E1AZ71 1325 aa31.31■■■□□ 2.6
Usf3-201ENSMUST00000088356 Grin2bQ01097 1482 aa31.31■■■□□ 2.6
Usf3-201ENSMUST00000088356 Fgd6Q69ZL1 1399 aa31.27■■■□□ 2.6
Usf3-201ENSMUST00000088356 Fmn1Q05860 1466 aa31.22■■■□□ 2.59
Usf3-201ENSMUST00000088356 AqrQ8CFQ3 1481 aaKnown RBP31.22■■■□□ 2.59
Usf3-201ENSMUST00000088356 Pprc1Q6NZN1 1644 aa31.2■■■□□ 2.59
Usf3-201ENSMUST00000088356 Rad54l2Q99NG0 1466 aa31.2■■■□□ 2.58
Usf3-201ENSMUST00000088356 Grin2aP35436 1464 aa31.14■■■□□ 2.58
Usf3-201ENSMUST00000088356 Magi3Q9EQJ9 1476 aa31.14■■■□□ 2.57
Usf3-201ENSMUST00000088356 Abcc1O35379 1528 aa31.1■■■□□ 2.57
Usf3-201ENSMUST00000088356 AknaQ80VW7 1404 aa31.09■■■□□ 2.57
Usf3-201ENSMUST00000088356 Efcab5A0JP43 1406 aa31.06■■■□□ 2.56
Usf3-201ENSMUST00000088356 Rapgef2Q8CHG7 1496 aa31.04■■■□□ 2.56
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms