RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Bms1Q6PGF5 1284 aaKnown RBP12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 4931400O07RikQ9D4M5 137 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Gpatch8A2A6A1 1505 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Ncbp1Q3UYV9 790 aaKnown RBP12.44□□□□□ -0.42
Copb1-201ENSMUST00000033012 Neurod2Q62414 383 aa12.44□□□□□ -0.42
Copb1-201ENSMUST00000033012 Map7O88735 730 aa12.44□□□□□ -0.42
Copb1-201ENSMUST00000033012 Dot1lQ6XZL8 1540 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Arhgef11Q68FM7 1552 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Hs1bp3Q3TC93 395 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Ralbp1Q62172 648 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Anp32cQ64G17 123 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Bloc1s4Q8VED2 215 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Glipr1l2Q9CQ35 332 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Rcan3Q9JKK0 239 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Gm16486A0A1D5RMD1 1434 aa12.43□□□□□ -0.42
Copb1-201ENSMUST00000033012 Phldb1Q6PDH0 1371 aaKnown RBP12.42□□□□□ -0.42
Copb1-201ENSMUST00000033012 Tmf1B9EKI3 1091 aa12.42□□□□□ -0.42
Copb1-201ENSMUST00000033012 Vsig10D3YX43 558 aa12.42□□□□□ -0.42
Copb1-201ENSMUST00000033012 Trak1Q6PD31 939 aa12.42□□□□□ -0.42
Copb1-201ENSMUST00000033012 Nfatc2ipO09130 412 aa12.41□□□□□ -0.42
Copb1-201ENSMUST00000033012 Kdm4aQ8BW72 1064 aa12.41□□□□□ -0.42
Copb1-201ENSMUST00000033012 Wdr62Q3U3T8 1523 aa12.41□□□□□ -0.42
Copb1-201ENSMUST00000033012 Grin2aP35436 1464 aa12.41□□□□□ -0.42
Copb1-201ENSMUST00000033012 Lmod3E9QA62 571 aa12.41□□□□□ -0.42
Copb1-201ENSMUST00000033012 Samd9lQ69Z37 1561 aa12.41□□□□□ -0.42
Copb1-201ENSMUST00000033012 Gas2l2Q5SSG4 860 aa12.4□□□□□ -0.42
Copb1-201ENSMUST00000033012 Arhgap31A6X8Z5 1425 aa12.4□□□□□ -0.42
Copb1-201ENSMUST00000033012 Ptgs1P22437 602 aa12.4□□□□□ -0.42
Copb1-201ENSMUST00000033012 Rad54l2Q99NG0 1466 aa12.4□□□□□ -0.42
Copb1-201ENSMUST00000033012 Dync1i1O88485 628 aa12.39□□□□□ -0.43
Copb1-201ENSMUST00000033012 Prdm4Q80V63 803 aa12.39□□□□□ -0.43
Copb1-201ENSMUST00000033012 Ube2q2Q8K2Z8 378 aa12.39□□□□□ -0.43
Copb1-201ENSMUST00000033012 Irx4Q9QY61 515 aa12.39□□□□□ -0.43
Copb1-201ENSMUST00000033012 Mdc1Q5PSV9 1707 aa12.39□□□□□ -0.43
Copb1-201ENSMUST00000033012 Gm9992B2RWK3 458 aa12.38□□□□□ -0.43
Copb1-201ENSMUST00000033012 Unc93aQ710D3 458 aa12.38□□□□□ -0.43
Copb1-201ENSMUST00000033012 Dmrtc1Q9D9R7 182 aa12.38□□□□□ -0.43
Copb1-201ENSMUST00000033012 Arhgap4B1AUY3 965 aa12.38□□□□□ -0.43
Copb1-201ENSMUST00000033012 Casq1O09165 405 aa12.38□□□□□ -0.43
Copb1-201ENSMUST00000033012 Fez2Q6TYB5 348 aa12.37□□□□□ -0.43
Copb1-201ENSMUST00000033012 Kif18aQ91WD7 886 aa12.37□□□□□ -0.43
Copb1-201ENSMUST00000033012 Chmp4cQ9D7F7 232 aa12.37□□□□□ -0.43
Copb1-201ENSMUST00000033012 Kcnj4P52189 445 aa12.37□□□□□ -0.43
Copb1-201ENSMUST00000033012 Uspl1Q3ULM6 1089 aa12.37□□□□□ -0.43
Copb1-201ENSMUST00000033012 Trappc8E9PWG2 1437 aa12.37□□□□□ -0.43
Copb1-201ENSMUST00000033012 Rasa1E9PYG6 1038 aa12.36□□□□□ -0.43
Copb1-201ENSMUST00000033012 Sh3bp1P55194 680 aa12.36□□□□□ -0.43
Copb1-201ENSMUST00000033012 Rbm42Q91V81 474 aaKnown RBP12.36□□□□□ -0.43
Copb1-201ENSMUST00000033012 E4f1Q8CCE9 783 aa12.36□□□□□ -0.43
Copb1-201ENSMUST00000033012 Mrvi1Q9WUX5 899 aaKnown RBP12.36□□□□□ -0.43
Copb1-201ENSMUST00000033012 Cfap74Q3UY96 1578 aa12.36□□□□□ -0.43
Copb1-201ENSMUST00000033012 Col17a1Q07563 1470 aa12.35□□□□□ -0.43
Copb1-201ENSMUST00000033012 U2af2P26369 475 aaKnown RBP12.35□□□□□ -0.43
Copb1-201ENSMUST00000033012 Golga2Q921M4 999 aa12.35□□□□□ -0.43
Copb1-201ENSMUST00000033012 Cavin1O54724 392 aa12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 Fbxo3Q9DC63 480 aa12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 Adcy10Q8C0T9 1614 aa12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 Cog6Q8R3I3 657 aa12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 Cluap1Q8R3P7 413 aa12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 Ccdc173A0JLY1 547 aa12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 Rbm27Q5SFM8 1060 aaKnown RBP12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 BbxQ8VBW5 907 aa12.34□□□□□ -0.43
Copb1-201ENSMUST00000033012 Plb1Q3TTY0 1478 aa12.33□□□□□ -0.44
Copb1-201ENSMUST00000033012 Duox2A2AQ99 1517 aa12.33□□□□□ -0.44
Copb1-201ENSMUST00000033012 Ccdc141E9Q8Q6 1531 aa12.33□□□□□ -0.44
Copb1-201ENSMUST00000033012 Bach2P97303 839 aa12.33□□□□□ -0.44
Copb1-201ENSMUST00000033012 KnstrnQ9D9Z1 312 aaKnown RBP12.33□□□□□ -0.44
Copb1-201ENSMUST00000033012 AU019823E9PUQ3 292 aa12.33□□□□□ -0.44
Copb1-201ENSMUST00000033012 Setd1bQ8CFT2 1985 aa12.33□□□□□ -0.44
Copb1-201ENSMUST00000033012 Syce3B5KM66 88 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Shroom2A2ALU4 1481 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Erich6D3Z6S9 713 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Znf608Q56A10 1511 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Zkscan1Q8BGS3 561 aaKnown RBP12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Rsph4aQ8BYM7 716 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Nup155Q99P88 1391 aaKnown RBP12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Map7d2A2AG50 781 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 AcrbpQ3V140 540 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 1700010I14RikQ7TPG0 532 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Sass6Q80UK7 654 aa12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Tfip11Q9ERA6 838 aaKnown RBP12.32□□□□□ -0.44
Copb1-201ENSMUST00000033012 Fam135aQ6NS59 1506 aa12.31□□□□□ -0.44
Copb1-201ENSMUST00000033012 PogzQ8BZH4 1409 aaKnown RBP12.31□□□□□ -0.44
Copb1-201ENSMUST00000033012 Swt1Q9DBQ9 907 aa12.31□□□□□ -0.44
Copb1-201ENSMUST00000033012 CtifQ6PEE2 600 aaKnown RBP12.31□□□□□ -0.44
Copb1-201ENSMUST00000033012 Kiaa1107Q80TK0 1369 aa12.31□□□□□ -0.44
Copb1-201ENSMUST00000033012 Brd1E9PZ26 1189 aaKnown RBP12.31□□□□□ -0.44
Copb1-201ENSMUST00000033012 Hvcn1Q3U2S8 269 aa12.3□□□□□ -0.44
Copb1-201ENSMUST00000033012 Ccdc96Q9CR92 584 aa12.3□□□□□ -0.44
Copb1-201ENSMUST00000033012 Chd1lQ9CXF7 900 aa12.3□□□□□ -0.44
Copb1-201ENSMUST00000033012 Slc4a1apE9PX68 744 aa12.3□□□□□ -0.44
Copb1-201ENSMUST00000033012 Gripap1Q8VD04 806 aa12.3□□□□□ -0.44
Copb1-201ENSMUST00000033012 Capn2O08529 700 aa12.29□□□□□ -0.44
Copb1-201ENSMUST00000033012 Chrm1P12657 460 aa12.29□□□□□ -0.44
Copb1-201ENSMUST00000033012 Fam184bQ0KK56 942 aa12.29□□□□□ -0.44
Copb1-201ENSMUST00000033012 SkilQ60665 675 aa12.29□□□□□ -0.44
Copb1-201ENSMUST00000033012 Rnf214Q8BFU3 668 aaKnown RBP12.29□□□□□ -0.44
Copb1-201ENSMUST00000033012 Zmynd15Q8C0R7 736 aa12.29□□□□□ -0.44
Copb1-201ENSMUST00000033012 Nphp4P59240 1425 aa12.29□□□□□ -0.44
Copb1-201ENSMUST00000033012 Iqsec2Q5DU25 1478 aa12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms