RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Tsen2Q6P7W5 460 aa13.18□□□□□ -0.3
Ciita-201ENSMUST00000023147 Srek1Q8BZX4 494 aaKnown RBP13.17□□□□□ -0.3
Ciita-201ENSMUST00000023147 Sh3bgrQ9WUZ7 214 aa13.17□□□□□ -0.3
Ciita-201ENSMUST00000023147 Samd9lQ69Z37 1561 aa13.17□□□□□ -0.3
Ciita-201ENSMUST00000023147 Cetn4Q8K4K1 168 aa13.17□□□□□ -0.3
Ciita-201ENSMUST00000023147 Txndc2Q6P902 515 aa13.17□□□□□ -0.3
Ciita-201ENSMUST00000023147 Ccdc43Q9CR29 222 aaKnown RBP13.16□□□□□ -0.3
Ciita-201ENSMUST00000023147 Arid4aF8VPQ2 1261 aaKnown RBP13.16□□□□□ -0.3
Ciita-201ENSMUST00000023147 Tmc1Q8R4P5 757 aa13.16□□□□□ -0.3
Ciita-201ENSMUST00000023147 Usp40Q8BWR4 1235 aa13.15□□□□□ -0.3
Ciita-201ENSMUST00000023147 Arhgap5P97393 1501 aa13.15□□□□□ -0.3
Ciita-201ENSMUST00000023147 Sox12Q04890 314 aa13.15□□□□□ -0.3
Ciita-201ENSMUST00000023147 Zrsr2Q62377 462 aaKnown RBP13.15□□□□□ -0.3
Ciita-201ENSMUST00000023147 Smc5Q8CG46 1101 aaKnown RBP13.15□□□□□ -0.3
Ciita-201ENSMUST00000023147 KarsQ99MN1 595 aaKnown RBP13.15□□□□□ -0.3
Ciita-201ENSMUST00000023147 Sptbn5F6UCX4 1208 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Gabpb2P81069 414 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Nap1l3Q794H2 544 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 St18Q80TY4 1045 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Znf330Q922H9 316 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Pla2r1Q62028 1487 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Fam135aQ6NS59 1506 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Pde4cQ3UEI1 686 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Fan1Q69ZT1 1020 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Podxl2Q8CAE9 603 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Necab1Q8BG18 352 aa13.14□□□□□ -0.31
Ciita-201ENSMUST00000023147 Gcc2Q8CHG3 1679 aa13.13□□□□□ -0.31
Ciita-201ENSMUST00000023147 Pank1Q8K4K6 548 aa13.13□□□□□ -0.31
Ciita-201ENSMUST00000023147 Kif21aQ9QXL2 1672 aa13.13□□□□□ -0.31
Ciita-201ENSMUST00000023147 G3bp1P97855 465 aaKnown RBP13.13□□□□□ -0.31
Ciita-201ENSMUST00000023147 Gm14025A2AP89 1413 aa13.13□□□□□ -0.31
Ciita-201ENSMUST00000023147 Rapgef6Q5NCJ1 1609 aa13.12□□□□□ -0.31
Ciita-201ENSMUST00000023147 Gprasp1Q5U4C1 1347 aa13.12□□□□□ -0.31
Ciita-201ENSMUST00000023147 Tnpo1Q8BFY9 898 aaKnown RBP13.12□□□□□ -0.31
Ciita-201ENSMUST00000023147 PrxO55103 1391 aa13.12□□□□□ -0.31
Ciita-201ENSMUST00000023147 Ccdc60Q8C4J0 545 aa13.12□□□□□ -0.31
Ciita-201ENSMUST00000023147 ErbinQ80TH2 1402 aa13.12□□□□□ -0.31
Ciita-201ENSMUST00000023147 Dusp9Q7TNL7 452 aa13.12□□□□□ -0.31
Ciita-201ENSMUST00000023147 Ncoa3O09000 1398 aa13.11□□□□□ -0.31
Ciita-201ENSMUST00000023147 Fhod3Q76LL6 1578 aa13.11□□□□□ -0.31
Ciita-201ENSMUST00000023147 Zmym4A2A791 1549 aaKnown RBP13.11□□□□□ -0.31
Ciita-201ENSMUST00000023147 Paf1Q8K2T8 535 aa13.11□□□□□ -0.31
Ciita-201ENSMUST00000023147 Ccdc171E9Q1U1 1324 aa13.1□□□□□ -0.31
Ciita-201ENSMUST00000023147 Filip1lQ6P6L0 1131 aa13.1□□□□□ -0.31
Ciita-201ENSMUST00000023147 Kif3cO35066 796 aa13.1□□□□□ -0.31
Ciita-201ENSMUST00000023147 MlecQ6ZQI3 291 aaKnown RBP13.1□□□□□ -0.31
Ciita-201ENSMUST00000023147 Hook1Q8BIL5 728 aa13.1□□□□□ -0.31
Ciita-201ENSMUST00000023147 Slc4a10Q5DTL9 1118 aa13.1□□□□□ -0.31
Ciita-201ENSMUST00000023147 Ap3b2Q9JME5 1082 aa13.1□□□□□ -0.31
Ciita-201ENSMUST00000023147 Dhx16G3X8X0 1044 aaKnown RBP13.09□□□□□ -0.31
Ciita-201ENSMUST00000023147 RalgapbQ8BQZ4 1484 aa13.09□□□□□ -0.31
Ciita-201ENSMUST00000023147 UvssaQ9D479 717 aa13.09□□□□□ -0.31
Ciita-201ENSMUST00000023147 Hap1O35668 628 aa13.09□□□□□ -0.31
Ciita-201ENSMUST00000023147 Mink1Q9JM52 1308 aa13.09□□□□□ -0.31
Ciita-201ENSMUST00000023147 SkilQ60665 675 aa13.09□□□□□ -0.31
Ciita-201ENSMUST00000023147 Egfem1Q8C088 590 aa13.09□□□□□ -0.31
Ciita-201ENSMUST00000023147 Cplx1P63040 134 aa13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 Ppp1r9bQ6R891 817 aaKnown RBP13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 Pibf1E9Q6K3 756 aa13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 Hs1bp3Q3TC93 395 aa13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 1700010I14RikQ7TPG0 532 aa13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 Rufy1Q8BIJ7 712 aa13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 Gtf3c5Q8R2T8 520 aa13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 Abca5Q8K448 1642 aa13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 WizO88286 1684 aaKnown RBP13.08□□□□□ -0.32
Ciita-201ENSMUST00000023147 Rfx1P48377 963 aa13.07□□□□□ -0.32
Ciita-201ENSMUST00000023147 Lrrcc1Q69ZB0 1026 aa13.07□□□□□ -0.32
Ciita-201ENSMUST00000023147 Cpsf1Q9EPU4 1441 aaKnown RBP13.07□□□□□ -0.32
Ciita-201ENSMUST00000023147 Naip6Q9JIB6 1403 aa13.07□□□□□ -0.32
Ciita-201ENSMUST00000023147 Kdm3bQ6ZPY7 1562 aa13.07□□□□□ -0.32
Ciita-201ENSMUST00000023147 Stk31Q99MW1 1018 aa13.07□□□□□ -0.32
Ciita-201ENSMUST00000023147 Drc7Q6V3W6 876 aa13.07□□□□□ -0.32
Ciita-201ENSMUST00000023147 Ccdc173A0JLY1 547 aa13.06□□□□□ -0.32
Ciita-201ENSMUST00000023147 Chaf1aQ9QWF0 911 aa13.06□□□□□ -0.32
Ciita-201ENSMUST00000023147 Mcm2P97310 904 aa13.06□□□□□ -0.32
Ciita-201ENSMUST00000023147 March6Q6ZQ89 909 aa13.06□□□□□ -0.32
Ciita-201ENSMUST00000023147 Zmym3Q9JLM4 1370 aa13.06□□□□□ -0.32
Ciita-201ENSMUST00000023147 AppP12023 770 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 Ccdc146E9Q9F7 977 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 Kif4P33174 1231 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 Cul7Q8VE73 1689 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 TnikP83510 1323 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 Taf3Q5HZG4 932 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 Rec8Q8C5S7 591 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 Wdr78E9PYY5 807 aa13.05□□□□□ -0.32
Ciita-201ENSMUST00000023147 Dctn1O08788 1281 aa13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Rab11fip3Q8CHD8 1047 aa13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Gripap1Q8VD04 806 aa13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Pprc1Q6NZN1 1644 aa13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Znhit6Q3UFB2 460 aaKnown RBP13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Phf23Q8BSN5 401 aa13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Fam193aQ8CGI1 1231 aaKnown RBP13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Mug2P28666 1451 aa13.04□□□□□ -0.32
Ciita-201ENSMUST00000023147 Disp1Q3TDN0 1521 aa13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Map4k4P97820 1233 aaKnown RBP13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Ccp110Q7TSH4 1004 aa13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Fez1Q8K0X8 392 aa13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Rnf20Q5DTM8 973 aa13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Ecm2Q5FW85 670 aa13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Neo1P97798 1493 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms