RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D RPL36BO14455 100 aaKnown RBP1.9□□□□□ -2.1
YDR034C-DYDR034C-D RPL36AP05745 100 aaPredicted RBP1.9□□□□□ -2.1
YDR034C-DYDR034C-D CDC39P25655 2108 aaKnown RBP1.9□□□□□ -2.1
YDR034C-DYDR034C-D TY1B-BRQ12193 1756 aa1.9□□□□□ -2.1
YDR034C-DYDR034C-D RPS30AP0CX33 63 aaKnown RBP1.9□□□□□ -2.11
YDR034C-DYDR034C-D RPS30BP0CX34 63 aaKnown RBP1.9□□□□□ -2.11
YDR034C-DYDR034C-D EDC1P53080 175 aaPredicted RBP1.9□□□□□ -2.11
YDR034C-DYDR034C-D YPR153WQ06537 140 aa1.9□□□□□ -2.11
YDR034C-DYDR034C-D YCF1P39109 1515 aaKnown RBP1.9□□□□□ -2.11
YDR034C-DYDR034C-D YPL038W-AQ3E7B4 63 aa1.9□□□□□ -2.11
YDR034C-DYDR034C-D HIR3P47171 1648 aa1.9□□□□□ -2.11
YDR034C-DYDR034C-D SNF2P22082 1703 aa1.9□□□□□ -2.11
YDR034C-DYDR034C-D RTC6O14464 93 aa1.9□□□□□ -2.11
YDR034C-DYDR034C-D RPB7P34087 171 aa1.9□□□□□ -2.11
YDR034C-DYDR034C-D POR2P40478 281 aa1.9□□□□□ -2.11
YDR034C-DYDR034C-D PEP1P32319 1579 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D RKR1Q04781 1562 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D NTE1Q04958 1679 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D PFY1P07274 126 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D YEL008WP40001 126 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D PRM7Q12459 698 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D YOR314WQ12506 109 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D COA2Q3E823 68 aa1.89□□□□□ -2.11
YDR034C-DYDR034C-D BPT1P14772 1559 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D HSP150P32478 413 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D SED1Q01589 338 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D HUB1Q6Q546 73 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D RIF1P29539 1916 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D DNF1P32660 1571 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D YMR122CQ03879 124 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D HUG1Q6Q5K6 68 aa1.88□□□□□ -2.11
YDR034C-DYDR034C-D YHR213WP0CI67 198 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-GR3Q12316 1755 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-ORQ92393 1755 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D DNF2Q12675 1612 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-JR2P47100 1755 aaKnown RBP1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-ER2Q03619 1755 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-MR1Q04214 1755 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-MR2Q04670 1755 aaKnown RBP1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-LR1Q12088 1755 aaKnown RBP1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-NL1Q12112 1755 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-GR1Q12141 1755 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TY1B-BLQ12490 1755 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D RPO21P04050 1733 aaKnown RBP1.87□□□□□ -2.11
YDR034C-DYDR034C-D YOL118CQ08259 102 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D YIL156W-BQ2V2P4 73 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D TAR1Q8TGM6 124 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D YLR157W-DP0CE99 70 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D YMR321CQ04898 105 aa1.87□□□□□ -2.11
YDR034C-DYDR034C-D NOP10Q6Q547 58 aaPredicted RBP1.86□□□□□ -2.11
YDR034C-DYDR034C-D CHC1P22137 1653 aaKnown RBP1.86□□□□□ -2.11
YDR034C-DYDR034C-D YRF1-3P0CX14 1859 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D YRF1-7P0CX15 1859 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D YRF1-6P53819 1859 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D YBR219CP38317 127 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D YEL014CP39999 101 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D MIX17Q03667 156 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D BRP1P53194 125 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D ESP1Q03018 1630 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D LCL2Q08045 131 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D SDH6Q3E785 79 aa1.86□□□□□ -2.11
YDR034C-DYDR034C-D YNL122CP53921 115 aaPredicted RBP1.85□□□□□ -2.11
YDR034C-DYDR034C-D GIS2P53849 153 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
YDR034C-DYDR034C-D YLR162WQ06235 118 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D MLP2P40457 1679 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D YRF1-1P0CX20 1796 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D YRF1-5P0CX21 1796 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D YRF1-8P0CX22 1796 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D YMR141CP40211 102 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D YER188C-AP0C0V2 99 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D SHU1P38751 150 aa1.85□□□□□ -2.11
YDR034C-DYDR034C-D MIX14Q04341 121 aa1.84□□□□□ -2.11
YDR034C-DYDR034C-D NUP188P52593 1655 aaKnown RBP1.84□□□□□ -2.11
YDR034C-DYDR034C-D BNI1P41832 1953 aa1.84□□□□□ -2.11
YDR034C-DYDR034C-D YJR107C-AP0CT86 78 aa1.84□□□□□ -2.11
YDR034C-DYDR034C-D PDR15Q04182 1529 aaKnown RBP1.84□□□□□ -2.11
YDR034C-DYDR034C-D BSC4P53841 131 aa1.84□□□□□ -2.12
YDR034C-DYDR034C-D YKL023C-AQ2V2P3 75 aa1.84□□□□□ -2.12
YDR034C-DYDR034C-D YOR008C-AQ3E7B9 74 aa1.84□□□□□ -2.12
YDR034C-DYDR034C-D GDB1Q06625 1536 aa1.84□□□□□ -2.12
YDR034C-DYDR034C-D Q0032Q9ZZX7 96 aa1.84□□□□□ -2.12
YDR034C-DYDR034C-D RGM1Q00453 211 aa1.83□□□□□ -2.12
YDR034C-DYDR034C-D ULS1Q08562 1619 aa1.82□□□□□ -2.12
YDR034C-DYDR034C-D ACC1Q00955 2233 aaKnown RBP1.82□□□□□ -2.12
YDR034C-DYDR034C-D YKL065W-AQ2V2P2 73 aa1.82□□□□□ -2.12
YDR034C-DYDR034C-D QCR8P08525 94 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D MVB12P42939 101 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D YHR007C-AQ07074 71 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D ARO1P08566 1588 aaKnown RBP1.81□□□□□ -2.12
YDR034C-DYDR034C-D SIP18P50263 79 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D YGR121W-AQ3E816 71 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D MRX7P53869 86 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D YRF1-2P40105 1681 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D RRP5Q05022 1729 aaKnown RBP1.81□□□□□ -2.12
YDR034C-DYDR034C-D COX12Q01519 83 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D YHR086W-AQ3E746 53 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D YMR175W-AQ3E766 64 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D YNL042W-BQ3E7Z2 85 aa1.81□□□□□ -2.12
YDR034C-DYDR034C-D TY1B-NL2Q99337 1749 aaKnown RBP1.81□□□□□ -2.12
YDR034C-DYDR034C-D MYO1P08964 1928 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms