Protein–RNA interactions for Protein: P38751

SHU1, Suppressor of HU sensitivity involved in recombination protein 1, yeastyeast

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHU1P38751 NSR1YGR159C 1245 nt14.35□□□□□ -0.11
SHU1P38751 YML009W-BYML009W-B 477 nt14.01□□□□□ -0.17
SHU1P38751 NOP1YDL014W 984 nt13.5□□□□□ -0.25
SHU1P38751 MDJ1YFL016C 1536 nt13.08□□□□□ -0.31
SHU1P38751 YJL027CYJL027C 417 nt12.09□□□□□ -0.47
SHU1P38751 YKL036CYKL036C 393 nt12.01□□□□□ -0.49
SHU1P38751 SRX1YKL086W 384 nt11.77□□□□□ -0.53
SHU1P38751 Q0297Q0297 156 nt11.65□□□□□ -0.54
SHU1P38751 DBP2YNL112W 1641 nt11.4□□□□□ -0.58
SHU1P38751 YBR190WYBR190W 312 nt11.34□□□□□ -0.59
SHU1P38751 YCR051WYCR051W 669 nt11.1□□□□□ -0.63
SHU1P38751 RTC3YHR087W 336 nt11.03□□□□□ -0.64
SHU1P38751 SSA3YBL075C 1950 nt10.99□□□□□ -0.65
SHU1P38751 TRN1tP(UGG)A 72 nt10.89□□□□□ -0.67
SHU1P38751 SUF9tP(UGG)F 72 nt10.89□□□□□ -0.67
SHU1P38751 SUF8tP(UGG)H 72 nt10.89□□□□□ -0.67
SHU1P38751 tP(UGG)LtP(UGG)L 72 nt10.89□□□□□ -0.67
SHU1P38751 SUF7tP(UGG)M 72 nt10.89□□□□□ -0.67
SHU1P38751 tP(UGG)N1tP(UGG)N1 72 nt10.89□□□□□ -0.67
SHU1P38751 tP(UGG)N2tP(UGG)N2 72 nt10.89□□□□□ -0.67
SHU1P38751 tP(UGG)O1tP(UGG)O1 72 nt10.89□□□□□ -0.67
SHU1P38751 SUF11tP(UGG)O2 72 nt10.89□□□□□ -0.67
SHU1P38751 CCC1YLR220W 969 nt10.73□□□□□ -0.69
SHU1P38751 RVS167YDR388W 1449 nt10.69□□□□□ -0.7
SHU1P38751 SCS3YGL126W 1143 nt10.66□□□□□ -0.7
SHU1P38751 PUT4YOR348C 1884 nt10.59□□□□□ -0.71
SHU1P38751 SCJ1YMR214W 1134 nt10.46□□□□□ -0.73
SHU1P38751 RPP1BYDL130W 321 nt10.44□□□□□ -0.74
SHU1P38751 YOL085CYOL085C 342 nt10.39□□□□□ -0.75
SHU1P38751 ARE1YCR048W 1833 nt10.25□□□□□ -0.77
SHU1P38751 PKP1YIL042C 1185 nt10.24□□□□□ -0.77
SHU1P38751 POA1YBR022W 534 nt10.22□□□□□ -0.77
SHU1P38751 SHR5YOL110W 714 nt10.2□□□□□ -0.78
SHU1P38751 URN1YPR152C 1398 nt10.16□□□□□ -0.78
SHU1P38751 tP(UGG)O3tP(UGG)O3 72 nt10.15□□□□□ -0.78
SHU1P38751 YHR049C-AYHR049C-A 297 nt10.14□□□□□ -0.79
SHU1P38751 SAH1YER043C 1350 nt10.14□□□□□ -0.79
SHU1P38751 OPI9YLR338W 858 nt10.13□□□□□ -0.79
SHU1P38751 BSC6YOL137W 1494 nt10.09□□□□□ -0.79
SHU1P38751 PET122YER153C 765 nt10□□□□□ -0.81
SHU1P38751 DEP1YAL013W 1218 nt9.99□□□□□ -0.81
SHU1P38751 RPN10YHR200W 807 nt9.97□□□□□ -0.81
SHU1P38751 SPT5YML010W 3192 nt9.92□□□□□ -0.82
SHU1P38751 BUD23YCR047C 828 nt9.87□□□□□ -0.83
SHU1P38751 YDJ1YNL064C 1230 nt9.86□□□□□ -0.83
SHU1P38751 PUN1YLR414C 792 nt9.85□□□□□ -0.83
SHU1P38751 YNL208WYNL208W 600 nt9.85□□□□□ -0.83
SHU1P38751 SCR1SCR1 522 nt9.82□□□□□ -0.84
SHU1P38751 SSA4YER103W 1929 nt9.81□□□□□ -0.84
SHU1P38751 PTC2YER089C 1395 nt9.75□□□□□ -0.85
SHU1P38751 NAB2YGL122C 1578 nt9.72□□□□□ -0.85
SHU1P38751 YJR018WYJR018W 363 nt9.68□□□□□ -0.86
SHU1P38751 RDN37-1RDN37-1 5354 nt9.68□□□□□ -0.86
SHU1P38751 RDN37-2RDN37-2 5354 nt9.68□□□□□ -0.86
SHU1P38751 RRN5YLR141W 1092 nt9.66□□□□□ -0.86
SHU1P38751 GAR1YHR089C 618 nt9.65□□□□□ -0.86
SHU1P38751 YJL225CYJL225C 5277 nt9.58□□□□□ -0.88
SHU1P38751 MEP2YNL142W 1500 nt9.53□□□□□ -0.88
SHU1P38751 FIS1YIL065C 468 nt9.51□□□□□ -0.89
SHU1P38751 DAL1YIR027C 1383 nt9.5□□□□□ -0.89
SHU1P38751 YER088W-BYER088W-B 147 nt9.47□□□□□ -0.89
SHU1P38751 BDF1YLR399C 2061 nt9.46□□□□□ -0.9
SHU1P38751 FPR4YLR449W 1179 nt9.44□□□□□ -0.9
SHU1P38751 INM2YDR287W 879 nt9.42□□□□□ -0.9
SHU1P38751 ATS1YAL020C 1002 nt9.42□□□□□ -0.9
SHU1P38751 PHO4YFR034C 939 nt9.41□□□□□ -0.9
SHU1P38751 RPP2BYDR382W 333 nt9.4□□□□□ -0.9
SHU1P38751 YJR120WYJR120W 351 nt9.39□□□□□ -0.91
SHU1P38751 YPS1YLR120C 1710 nt9.38□□□□□ -0.91
SHU1P38751 TIR1YER011W 765 nt9.37□□□□□ -0.91
SHU1P38751 RSB1YOR049C 1065 nt9.35□□□□□ -0.91
SHU1P38751 TAT1YBR069C 1860 nt9.34□□□□□ -0.91
SHU1P38751 DCW1YKL046C 1350 nt9.32□□□□□ -0.92
SHU1P38751 SSA1YAL005C 1929 nt9.31□□□□□ -0.92
SHU1P38751 YHR165W-AYHR165W-A 312 nt9.31□□□□□ -0.92
SHU1P38751 YDR095CYDR095C 411 nt9.26□□□□□ -0.93
SHU1P38751 YMR090WYMR090W 684 nt9.26□□□□□ -0.93
SHU1P38751 EMI2YDR516C 1503 nt9.24□□□□□ -0.93
SHU1P38751 YBL100CYBL100C 315 nt9.23□□□□□ -0.93
SHU1P38751 YBR220CYBR220C 1683 nt9.2□□□□□ -0.94
SHU1P38751 PAC11YDR488C 1602 nt9.15□□□□□ -0.94
SHU1P38751 YDL221WYDL221W 552 nt9.13□□□□□ -0.95
SHU1P38751 BDH2YAL061W 1254 nt9.12□□□□□ -0.95
SHU1P38751 SDH1YKL148C 1923 nt9.1□□□□□ -0.95
SHU1P38751 FUN26YAL022C 1554 nt9.1□□□□□ -0.95
SHU1P38751 ALF1YNL148C 765 nt9.09□□□□□ -0.95
SHU1P38751 RPP2AYOL039W 321 nt9.09□□□□□ -0.95
SHU1P38751 PTP1YDL230W 1008 nt9.06□□□□□ -0.96
SHU1P38751 CAC2YML102W 1407 nt9.05□□□□□ -0.96
SHU1P38751 SRB2YHR041C 633 nt9.02□□□□□ -0.97
SHU1P38751 TRM9YML014W 840 nt9.02□□□□□ -0.97
SHU1P38751 SEC11YIR022W 504 nt9□□□□□ -0.97
SHU1P38751 SCC4YER147C 1875 nt8.98□□□□□ -0.97
SHU1P38751 PCH2YBR186W 1695 nt8.97□□□□□ -0.97
SHU1P38751 CCT6YDR188W 1641 nt8.95□□□□□ -0.98
SHU1P38751 SIS1YNL007C 1059 nt8.95□□□□□ -0.98
SHU1P38751 SUF2tP(AGG)C 72 nt8.94□□□□□ -0.98
SHU1P38751 SUF10tP(AGG)N 72 nt8.94□□□□□ -0.98
SHU1P38751 LSM3YLR438C-A 270 nt8.93□□□□□ -0.98
SHU1P38751 IRC15YPL017C 1500 nt8.93□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms