Protein–RNA interactions for Protein: P42939

MVB12, Multivesicular body sorting factor 12, yeastyeast

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVB12P42939 NSR1YGR159C 1245 nt13.91□□□□□ -0.18
MVB12P42939 YML009W-BYML009W-B 477 nt13.65□□□□□ -0.22
MVB12P42939 NOP1YDL014W 984 nt13.22□□□□□ -0.29
MVB12P42939 MDJ1YFL016C 1536 nt12.57□□□□□ -0.4
MVB12P42939 YKL036CYKL036C 393 nt11.86□□□□□ -0.51
MVB12P42939 YJL027CYJL027C 417 nt11.63□□□□□ -0.55
MVB12P42939 SRX1YKL086W 384 nt11.51□□□□□ -0.57
MVB12P42939 Q0297Q0297 156 nt11.43□□□□□ -0.58
MVB12P42939 DBP2YNL112W 1641 nt10.99□□□□□ -0.65
MVB12P42939 YBR190WYBR190W 312 nt10.88□□□□□ -0.67
MVB12P42939 YCR051WYCR051W 669 nt10.87□□□□□ -0.67
MVB12P42939 TRN1tP(UGG)A 72 nt10.59□□□□□ -0.71
MVB12P42939 SUF9tP(UGG)F 72 nt10.59□□□□□ -0.71
MVB12P42939 SUF8tP(UGG)H 72 nt10.59□□□□□ -0.71
MVB12P42939 tP(UGG)LtP(UGG)L 72 nt10.59□□□□□ -0.71
MVB12P42939 SUF7tP(UGG)M 72 nt10.59□□□□□ -0.71
MVB12P42939 tP(UGG)N1tP(UGG)N1 72 nt10.59□□□□□ -0.71
MVB12P42939 tP(UGG)N2tP(UGG)N2 72 nt10.59□□□□□ -0.71
MVB12P42939 tP(UGG)O1tP(UGG)O1 72 nt10.59□□□□□ -0.71
MVB12P42939 SUF11tP(UGG)O2 72 nt10.59□□□□□ -0.71
MVB12P42939 RTC3YHR087W 336 nt10.59□□□□□ -0.71
MVB12P42939 SCS3YGL126W 1143 nt10.58□□□□□ -0.72
MVB12P42939 CCC1YLR220W 969 nt10.44□□□□□ -0.74
MVB12P42939 RVS167YDR388W 1449 nt10.35□□□□□ -0.75
MVB12P42939 RPP1BYDL130W 321 nt10.25□□□□□ -0.77
MVB12P42939 YOL085CYOL085C 342 nt10.25□□□□□ -0.77
MVB12P42939 SSA3YBL075C 1950 nt10.17□□□□□ -0.78
MVB12P42939 SCJ1YMR214W 1134 nt10.13□□□□□ -0.79
MVB12P42939 PKP1YIL042C 1185 nt10.08□□□□□ -0.8
MVB12P42939 PUT4YOR348C 1884 nt10.08□□□□□ -0.8
MVB12P42939 tP(UGG)O3tP(UGG)O3 72 nt9.9□□□□□ -0.82
MVB12P42939 SHR5YOL110W 714 nt9.89□□□□□ -0.83
MVB12P42939 PET122YER153C 765 nt9.8□□□□□ -0.84
MVB12P42939 URN1YPR152C 1398 nt9.79□□□□□ -0.84
MVB12P42939 ARE1YCR048W 1833 nt9.78□□□□□ -0.84
MVB12P42939 OPI9YLR338W 858 nt9.73□□□□□ -0.85
MVB12P42939 POA1YBR022W 534 nt9.73□□□□□ -0.85
MVB12P42939 SAH1YER043C 1350 nt9.71□□□□□ -0.86
MVB12P42939 YHR049C-AYHR049C-A 297 nt9.68□□□□□ -0.86
MVB12P42939 SCR1SCR1 522 nt9.67□□□□□ -0.86
MVB12P42939 DEP1YAL013W 1218 nt9.65□□□□□ -0.86
MVB12P42939 RPN10YHR200W 807 nt9.64□□□□□ -0.87
MVB12P42939 YDJ1YNL064C 1230 nt9.63□□□□□ -0.87
MVB12P42939 BSC6YOL137W 1494 nt9.59□□□□□ -0.87
MVB12P42939 YNL208WYNL208W 600 nt9.54□□□□□ -0.88
MVB12P42939 RRN5YLR141W 1092 nt9.48□□□□□ -0.89
MVB12P42939 PUN1YLR414C 792 nt9.47□□□□□ -0.89
MVB12P42939 BUD23YCR047C 828 nt9.42□□□□□ -0.9
MVB12P42939 GAR1YHR089C 618 nt9.4□□□□□ -0.9
MVB12P42939 ATS1YAL020C 1002 nt9.38□□□□□ -0.91
MVB12P42939 PTC2YER089C 1395 nt9.36□□□□□ -0.91
MVB12P42939 SPT5YML010W 3192 nt9.35□□□□□ -0.91
MVB12P42939 YJR018WYJR018W 363 nt9.33□□□□□ -0.92
MVB12P42939 NAB2YGL122C 1578 nt9.32□□□□□ -0.92
MVB12P42939 YER088W-BYER088W-B 147 nt9.3□□□□□ -0.92
MVB12P42939 RSB1YOR049C 1065 nt9.2□□□□□ -0.94
MVB12P42939 SSA4YER103W 1929 nt9.19□□□□□ -0.94
MVB12P42939 DAL1YIR027C 1383 nt9.12□□□□□ -0.95
MVB12P42939 TIR1YER011W 765 nt9.12□□□□□ -0.95
MVB12P42939 FIS1YIL065C 468 nt9.12□□□□□ -0.95
MVB12P42939 RPP2BYDR382W 333 nt9.1□□□□□ -0.95
MVB12P42939 INM2YDR287W 879 nt9.08□□□□□ -0.96
MVB12P42939 FPR4YLR449W 1179 nt9.07□□□□□ -0.96
MVB12P42939 YJR120WYJR120W 351 nt9.06□□□□□ -0.96
MVB12P42939 MEP2YNL142W 1500 nt9.05□□□□□ -0.96
MVB12P42939 SSA1YAL005C 1929 nt9.04□□□□□ -0.96
MVB12P42939 PHO4YFR034C 939 nt9.02□□□□□ -0.97
MVB12P42939 YPS1YLR120C 1710 nt8.97□□□□□ -0.97
MVB12P42939 YHR165W-AYHR165W-A 312 nt8.9□□□□□ -0.98
MVB12P42939 YBL100CYBL100C 315 nt8.9□□□□□ -0.98
MVB12P42939 YDR095CYDR095C 411 nt8.87□□□□□ -0.99
MVB12P42939 DCW1YKL046C 1350 nt8.86□□□□□ -0.99
MVB12P42939 BDF1YLR399C 2061 nt8.85□□□□□ -0.99
MVB12P42939 BDH2YAL061W 1254 nt8.84□□□□□ -0.99
MVB12P42939 YMR090WYMR090W 684 nt8.81□□□□□ -1
MVB12P42939 FUN26YAL022C 1554 nt8.78□□□□□ -1
MVB12P42939 EMI2YDR516C 1503 nt8.77□□□□□ -1.01
MVB12P42939 SRB2YHR041C 633 nt8.77□□□□□ -1.01
MVB12P42939 ALF1YNL148C 765 nt8.76□□□□□ -1.01
MVB12P42939 TAT1YBR069C 1860 nt8.75□□□□□ -1.01
MVB12P42939 PST2YDR032C 597 nt8.74□□□□□ -1.01
MVB12P42939 TRM9YML014W 840 nt8.73□□□□□ -1.01
MVB12P42939 RPP2AYOL039W 321 nt8.71□□□□□ -1.02
MVB12P42939 YBR220CYBR220C 1683 nt8.71□□□□□ -1.02
MVB12P42939 YDL221WYDL221W 552 nt8.69□□□□□ -1.02
MVB12P42939 YJL225CYJL225C 5277 nt8.69□□□□□ -1.02
MVB12P42939 LSM3YLR438C-A 270 nt8.68□□□□□ -1.02
MVB12P42939 PTP1YDL230W 1008 nt8.66□□□□□ -1.02
MVB12P42939 CCT6YDR188W 1641 nt8.65□□□□□ -1.02
MVB12P42939 SUF2tP(AGG)C 72 nt8.65□□□□□ -1.02
MVB12P42939 SUF10tP(AGG)N 72 nt8.65□□□□□ -1.02
MVB12P42939 SDH1YKL148C 1923 nt8.64□□□□□ -1.03
MVB12P42939 WWM1YFL010C 636 nt8.63□□□□□ -1.03
MVB12P42939 CAC2YML102W 1407 nt8.63□□□□□ -1.03
MVB12P42939 SIS1YNL007C 1059 nt8.61□□□□□ -1.03
MVB12P42939 YGR021WYGR021W 873 nt8.57□□□□□ -1.04
MVB12P42939 YFL021C-AYFL021C-A 855 nt8.56□□□□□ -1.04
MVB12P42939 SCC4YER147C 1875 nt8.54□□□□□ -1.04
MVB12P42939 IRC15YPL017C 1500 nt8.52□□□□□ -1.05
MVB12P42939 SEC11YIR022W 504 nt8.51□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms