RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C YPR195CQ06594 109 aa0.53□□□□□ -2.32
UBP3YER151C DCI1Q08558 271 aa0.53□□□□□ -2.32
UBP3YER151C POC4Q12245 148 aaPredicted RBP0.53□□□□□ -2.32
UBP3YER151C ATP14Q12349 124 aa0.53□□□□□ -2.32
UBP3YER151C YPL247CQ12523 523 aa0.53□□□□□ -2.32
UBP3YER151C PCC1Q3E833 88 aa0.53□□□□□ -2.32
UBP3YER151C RPL23AP0CX41 137 aaKnown RBP0.53□□□□□ -2.32
UBP3YER151C RPL23BP0CX42 137 aaKnown RBP0.53□□□□□ -2.32
UBP3YER151C ACB1P31787 87 aa0.53□□□□□ -2.32
UBP3YER151C SPT4P32914 102 aaPredicted RBP0.53□□□□□ -2.32
UBP3YER151C YET1P35723 206 aa0.53□□□□□ -2.32
UBP3YER151C MRPL3P36516 390 aa0.53□□□□□ -2.32
UBP3YER151C OTU1P43558 301 aa0.53□□□□□ -2.32
UBP3YER151C FMP48P53233 369 aa0.53□□□□□ -2.32
UBP3YER151C FRQ1Q06389 190 aa0.53□□□□□ -2.32
UBP3YER151C YDR029WQ12111 104 aa0.53□□□□□ -2.32
UBP3YER151C SEN1Q00416 2231 aaKnown RBP0.53□□□□□ -2.32
UBP3YER151C RPS22AP0C0W1 130 aaKnown RBP0.52□□□□□ -2.33
UBP3YER151C QCR9P22289 66 aa0.52□□□□□ -2.33
UBP3YER151C SRP21P32342 167 aa0.52□□□□□ -2.33
UBP3YER151C SKG1P36169 355 aa0.52□□□□□ -2.33
UBP3YER151C DER1P38307 211 aa0.52□□□□□ -2.33
UBP3YER151C IPI1P38803 334 aaPredicted RBP0.52□□□□□ -2.33
UBP3YER151C SNL1P40548 159 aa0.52□□□□□ -2.33
UBP3YER151C LST8P41318 303 aa0.52□□□□□ -2.33
UBP3YER151C PRM8P53174 237 aa0.52□□□□□ -2.33
UBP3YER151C ARL3Q02804 198 aa0.52□□□□□ -2.33
UBP3YER151C SEC4P07560 215 aaKnown RBP0.52□□□□□ -2.33
UBP3YER151C YBL039W-BP0C268 59 aa0.52□□□□□ -2.33
UBP3YER151C ERD2P18414 219 aa0.52□□□□□ -2.33
UBP3YER151C PPA2P28239 310 aa0.52□□□□□ -2.33
UBP3YER151C PDX3P38075 228 aaKnown RBP0.52□□□□□ -2.33
UBP3YER151C NRG2P38082 220 aa0.52□□□□□ -2.33
UBP3YER151C SLM6P38343 150 aa0.52□□□□□ -2.33
UBP3YER151C EFM1P38732 585 aa0.52□□□□□ -2.33
UBP3YER151C NSA2P40078 261 aaKnown RBP0.52□□□□□ -2.33
UBP3YER151C PIR5P46999 287 aa0.52□□□□□ -2.33
UBP3YER151C MIC26P50087 233 aa0.52□□□□□ -2.33
UBP3YER151C PGA1P53896 198 aa0.52□□□□□ -2.33
UBP3YER151C HSK3P69852 69 aa0.52□□□□□ -2.33
UBP3YER151C HRT1Q08273 121 aa0.52□□□□□ -2.33
UBP3YER151C ATG41Q12048 136 aa0.52□□□□□ -2.33
UBP3YER151C ADF1Q2V2Q1 113 aa0.52□□□□□ -2.33
UBP3YER151C QCR2P07257 368 aa0.51□□□□□ -2.33
UBP3YER151C QCR8P08525 94 aa0.51□□□□□ -2.33
UBP3YER151C SFK1P35735 353 aa0.51□□□□□ -2.33
UBP3YER151C YBR016WP38216 128 aa0.51□□□□□ -2.33
UBP3YER151C GDT1P38301 280 aaPredicted RBP0.51□□□□□ -2.33
UBP3YER151C YBR292CP38357 123 aa0.51□□□□□ -2.33
UBP3YER151C PET100P38958 111 aa0.51□□□□□ -2.33
UBP3YER151C YER134CP40081 178 aa0.51□□□□□ -2.33
UBP3YER151C EDC1P53080 175 aaPredicted RBP0.51□□□□□ -2.33
UBP3YER151C SNZ1Q03148 297 aa0.51□□□□□ -2.33
UBP3YER151C OST6Q03723 332 aa0.51□□□□□ -2.33
UBP3YER151C GTO3Q04806 366 aa0.51□□□□□ -2.33
UBP3YER151C ECM19Q06011 112 aa0.51□□□□□ -2.33
UBP3YER151C SYM1Q06563 197 aa0.51□□□□□ -2.33
UBP3YER151C SCP1Q08873 200 aa0.51□□□□□ -2.33
UBP3YER151C GCN1P33892 2672 aaKnown RBP0.51□□□□□ -2.33
UBP3YER151C HIS3P06633 220 aa0.51□□□□□ -2.33
UBP3YER151C GCN3P14741 305 aa0.51□□□□□ -2.33
UBP3YER151C ZIP1P31111 875 aa0.51□□□□□ -2.33
UBP3YER151C VAM7P32912 316 aa0.51□□□□□ -2.33
UBP3YER151C MRPL28P36527 147 aa0.51□□□□□ -2.33
UBP3YER151C RGI1P40043 161 aaPredicted RBP0.51□□□□□ -2.33
UBP3YER151C RRG9P40156 214 aa0.51□□□□□ -2.33
UBP3YER151C SMD3P43321 101 aaKnown RBP0.51□□□□□ -2.33
UBP3YER151C YFL012WP43580 148 aa0.51□□□□□ -2.33
UBP3YER151C BRR6P53062 197 aa0.51□□□□□ -2.33
UBP3YER151C FAS1P07149 2051 aaKnown RBP0.51□□□□□ -2.33
UBP3YER151C HMRA1P0CY11 126 aa0.51□□□□□ -2.33
UBP3YER151C COS9P36034 407 aa0.51□□□□□ -2.33
UBP3YER151C LSM12P38828 187 aaKnown RBP0.51□□□□□ -2.33
UBP3YER151C LSM4P40070 187 aaKnown RBP0.51□□□□□ -2.33
UBP3YER151C TIR3P40552 269 aa0.51□□□□□ -2.33
UBP3YER151C TOS6P48560 102 aa0.51□□□□□ -2.33
UBP3YER151C YMR010WQ03687 405 aa0.51□□□□□ -2.33
UBP3YER151C YFH1Q07540 174 aa0.51□□□□□ -2.33
UBP3YER151C ATG5Q12380 294 aa0.51□□□□□ -2.33
UBP3YER151C YKL018C-AQ3E7A7 99 aa0.51□□□□□ -2.33
UBP3YER151C YDR034C-AP0C289 58 aa0.5□□□□□ -2.33
UBP3YER151C SPT14P32363 452 aa0.5□□□□□ -2.33
UBP3YER151C RPS20P38701 121 aaKnown RBP0.5□□□□□ -2.33
UBP3YER151C YHL005CP38752 130 aa0.5□□□□□ -2.33
UBP3YER151C YHR122WP38829 231 aa0.5□□□□□ -2.33
UBP3YER151C PGD1P40356 397 aa0.5□□□□□ -2.33
UBP3YER151C MPM1P40364 252 aa0.5□□□□□ -2.33
UBP3YER151C VMA10P48836 114 aaKnown RBP0.5□□□□□ -2.33
UBP3YER151C NUP49Q02199 472 aa0.5□□□□□ -2.33
UBP3YER151C EST3Q03096 181 aa0.5□□□□□ -2.33
UBP3YER151C TMA23Q03525 211 aa0.5□□□□□ -2.33
UBP3YER151C YMR320WQ04897 101 aa0.5□□□□□ -2.33
UBP3YER151C SFH1Q06168 426 aa0.5□□□□□ -2.33
UBP3YER151C BCP1Q06338 283 aa0.5□□□□□ -2.33
UBP3YER151C LCL2Q08045 131 aa0.5□□□□□ -2.33
UBP3YER151C YMR030W-AQ3E760 96 aa0.5□□□□□ -2.33
UBP3YER151C RPL25P04456 142 aaKnown RBP0.5□□□□□ -2.33
UBP3YER151C ERG24P32462 438 aaKnown RBP0.5□□□□□ -2.33
UBP3YER151C RPC25P35718 212 aa0.5□□□□□ -2.33
UBP3YER151C RPL14AP36105 138 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 178.3 ms