RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C RAD28Q12021 506 aa4.44□□□□□ -1.7
PDB1YBR221C YPR063CQ12160 140 aa4.44□□□□□ -1.7
PDB1YBR221C PST1Q12355 444 aa4.44□□□□□ -1.7
PDB1YBR221C RAD10P06838 210 aa4.43□□□□□ -1.7
PDB1YBR221C MRPL44P19956 98 aa4.43□□□□□ -1.7
PDB1YBR221C ATP15P21306 62 aa4.43□□□□□ -1.7
PDB1YBR221C SCM4P32564 187 aa4.43□□□□□ -1.7
PDB1YBR221C HOT13P36078 116 aa4.43□□□□□ -1.7
PDB1YBR221C MOH1P38191 138 aa4.43□□□□□ -1.7
PDB1YBR221C VTC1P40046 129 aaRIP-Chip data4.43□□□□□ -1.7not detected
PDB1YBR221C CUP9P41817 306 aa4.43□□□□□ -1.7
PDB1YBR221C YMR252CQ04814 134 aa4.43□□□□□ -1.7
PDB1YBR221C YMR254CQ04838 102 aa4.43□□□□□ -1.7
PDB1YBR221C ANT1Q06497 328 aa4.43□□□□□ -1.7
PDB1YBR221C SMT3Q12306 101 aaKnown RBP4.43□□□□□ -1.7
PDB1YBR221C RPL21BQ12672 160 aaKnown RBP4.43□□□□□ -1.7
PDB1YBR221C SRB6P32570 121 aa4.42□□□□□ -1.7
PDB1YBR221C YEL073CP39974 107 aa4.42□□□□□ -1.7
PDB1YBR221C RPL13BP40212 199 aaKnown RBP4.42□□□□□ -1.7
PDB1YBR221C BNS1P50084 137 aa4.42□□□□□ -1.7
PDB1YBR221C CRH1P53301 507 aa4.42□□□□□ -1.7
PDB1YBR221C SMD1Q02260 146 aaPredicted RBP4.42□□□□□ -1.7
PDB1YBR221C FIT1Q04433 528 aa4.42□□□□□ -1.7
PDB1YBR221C ATX2Q12067 313 aa4.42□□□□□ -1.7
PDB1YBR221C AYT1Q12226 474 aa4.42□□□□□ -1.7
PDB1YBR221C ATG5Q12380 294 aa4.42□□□□□ -1.7
PDB1YBR221C RPL13AQ12690 199 aaPredicted RBP4.42□□□□□ -1.7
PDB1YBR221C YAR023CD6VPM8 179 aa4.41□□□□□ -1.7
PDB1YBR221C RAS2P01120 322 aaKnown RBP4.41□□□□□ -1.7
PDB1YBR221C RPL42AP0CX27 106 aaKnown RBP4.41□□□□□ -1.7
PDB1YBR221C RPL42BP0CX28 106 aaKnown RBP4.41□□□□□ -1.7
PDB1YBR221C NOP1P15646 327 aaKnown RBP4.41□□□□□ -1.7
PDB1YBR221C DDR48P18899 430 aaKnown RBP4.41□□□□□ -1.7
PDB1YBR221C IPT1P38954 527 aa4.41□□□□□ -1.7
PDB1YBR221C YIL152WP40455 235 aa4.41□□□□□ -1.7
PDB1YBR221C TIR3P40552 269 aa4.41□□□□□ -1.7
PDB1YBR221C YFL067WP43537 175 aa4.41□□□□□ -1.7
PDB1YBR221C ATG18P43601 500 aa4.41□□□□□ -1.7
PDB1YBR221C ERV14P53173 138 aa4.41□□□□□ -1.7
PDB1YBR221C YDR102CQ03864 110 aa4.41□□□□□ -1.7
PDB1YBR221C GAL83Q04739 417 aa4.41□□□□□ -1.7
PDB1YBR221C SYM1Q06563 197 aa4.41□□□□□ -1.7
PDB1YBR221C RRT7Q07829 113 aa4.41□□□□□ -1.7
PDB1YBR221C JID1Q12350 301 aa4.41□□□□□ -1.7
PDB1YBR221C MED11Q99278 115 aa4.41□□□□□ -1.7
PDB1YBR221C YCR050CP25630 102 aa4.4□□□□□ -1.71
PDB1YBR221C YCR099CP25657 155 aa4.4□□□□□ -1.71
PDB1YBR221C CLB6P32943 380 aa4.4□□□□□ -1.71
PDB1YBR221C YIL086CP40503 102 aa4.4□□□□□ -1.71
PDB1YBR221C MPC1P53157 130 aaKnown RBP4.4□□□□□ -1.71
PDB1YBR221C YMR090WQ04304 227 aaKnown RBP4.4□□□□□ -1.71
PDB1YBR221C COA4Q05809 96 aa4.4□□□□□ -1.71
PDB1YBR221C ATO3Q12359 275 aa4.4□□□□□ -1.71
PDB1YBR221C SEC16P48415 2195 aaKnown RBP4.39□□□□□ -1.71
PDB1YBR221C MSW1P04803 379 aa4.39□□□□□ -1.71
PDB1YBR221C TMA19P35691 167 aaKnown RBP4.39□□□□□ -1.71
PDB1YBR221C YND1P40009 630 aa4.39□□□□□ -1.71
PDB1YBR221C NSA2P40078 261 aaKnown RBP4.39□□□□□ -1.71
PDB1YBR221C YER135CP40082 130 aa4.39□□□□□ -1.71
PDB1YBR221C CCS1P40202 249 aaKnown RBP4.39□□□□□ -1.71
PDB1YBR221C YIR035CP40579 254 aa4.39□□□□□ -1.71
PDB1YBR221C RPL21AQ02753 160 aaKnown RBP4.39□□□□□ -1.71
PDB1YBR221C YPR174CQ06616 221 aaPredicted RBP4.39□□□□□ -1.71
PDB1YBR221C YPR053CQ6Q5F3 151 aa4.39□□□□□ -1.71
PDB1YBR221C FLO5P38894 1075 aa4.38□□□□□ -1.71
PDB1YBR221C ARC15P40518 154 aaRIP-Chip data4.38□□□□□ -1.71not detected
PDB1YBR221C MRPS8Q03799 155 aa4.38□□□□□ -1.71
PDB1YBR221C TVP15Q03860 143 aa4.38□□□□□ -1.71
PDB1YBR221C FYV12Q08559 129 aa4.38□□□□□ -1.71
PDB1YBR221C YPL247CQ12523 523 aa4.38□□□□□ -1.71
PDB1YBR221C ODC2Q99297 307 aa4.38□□□□□ -1.71
PDB1YBR221C PAM17P36147 197 aa4.37□□□□□ -1.71
PDB1YBR221C RPR2P40571 144 aa4.37□□□□□ -1.71
PDB1YBR221C YGL118CP53132 145 aa4.37□□□□□ -1.71
PDB1YBR221C YMR244WQ04018 355 aa4.37□□□□□ -1.71
PDB1YBR221C SML1Q04964 104 aa4.37□□□□□ -1.71
PDB1YBR221C TIM9O74700 87 aa4.36□□□□□ -1.71
PDB1YBR221C YGL010WP25338 174 aa4.36□□□□□ -1.71
PDB1YBR221C FMT1P32785 401 aa4.36□□□□□ -1.71
PDB1YBR221C EMP24P32803 203 aaKnown RBP4.36□□□□□ -1.71
PDB1YBR221C DSK2P48510 373 aa4.36□□□□□ -1.71
PDB1YBR221C YNR064CP53750 290 aa4.36□□□□□ -1.71
PDB1YBR221C YPL067CQ02754 198 aa4.36□□□□□ -1.71
PDB1YBR221C YDR115WQ04598 105 aa4.36□□□□□ -1.71
PDB1YBR221C FIT3Q08907 204 aa4.36□□□□□ -1.71
PDB1YBR221C UBR1P19812 1950 aa4.35□□□□□ -1.71
PDB1YBR221C RPL9AP05738 191 aaKnown RBP4.35□□□□□ -1.71
PDB1YBR221C MDH2P22133 377 aa4.35□□□□□ -1.71
PDB1YBR221C SDH3P33421 198 aa4.35□□□□□ -1.71
PDB1YBR221C UMP1P38293 148 aa4.35□□□□□ -1.71
PDB1YBR221C ASP1P38986 381 aaPredicted RBP4.35□□□□□ -1.71
PDB1YBR221C RPL9BP51401 191 aaKnown RBP4.35□□□□□ -1.71
PDB1YBR221C API2Q04413 109 aa4.35□□□□□ -1.71
PDB1YBR221C CRC1Q12289 327 aa4.35□□□□□ -1.71
PDB1YBR221C YOR376W-AQ3E805 51 aa4.35□□□□□ -1.71
PDB1YBR221C COX5BP00425 151 aa4.34□□□□□ -1.71
PDB1YBR221C HMRA1P0CY11 126 aa4.34□□□□□ -1.71
PDB1YBR221C GPI18P38211 433 aa4.34□□□□□ -1.71
PDB1YBR221C HAL1Q01766 294 aa4.34□□□□□ -1.71
PDB1YBR221C YML122CQ03207 126 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms