RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZMYND15Q9H091 742 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 SRRM3A6NNA2 597 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 KRT7P08729 469 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 KCNE1P15382 129 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 IRX5P78411 483 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 UBXN11Q5T124 520 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 RGMBQ6NW40 437 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 UNC93AQ86WB7 457 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 CCDC89Q8N998 374 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 TMEM40Q8WWA1 233 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 DNAJB3Q8WWF6 145 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 NKD2Q969F2 451 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 TRAIPQ9BWF2 469 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 AP5M1Q9H0R1 490 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 UBQLN1Q9UMX0 589 aaKnown RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 EIF3HO15372 352 aaKnown RBP eCLIP18.6■□□□□ 0.57
SFXN1-208ENST00000507823 TREHO43280 583 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 SETSIPP0DME0 302 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 CRYBB1P53674 252 aaPredicted RBP18.6■□□□□ 0.57
SFXN1-208ENST00000507823 DENND2CQ68D51 928 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 LIMS2Q7Z4I7 341 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 SAPCD2Q86UD0 394 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 RELL1Q8IUW5 271 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 BBOF1Q8ND07 529 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 FRMD8P1Q9BZ68 369 aaPredicted RBP18.6■□□□□ 0.57
SFXN1-208ENST00000507823 SEMA4AQ9H3S1 761 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 ASIC3Q9UHC3 531 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 GOLGA8SH3BPF8 625 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 PIRO00625 290 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 RIPK2O43353 540 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 RECQL4O94761 1208 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 IVLP07476 585 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 C9orf57Q5W0N0 161 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 HOOK3Q86VS8 718 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 ARFGAP2Q8N6H7 521 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 CCHCR1Q8TD31 782 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 PGM2Q96G03 612 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 METTL5Q9NRN9 209 aaKnown RBP18.6■□□□□ 0.57
SFXN1-208ENST00000507823 TUBGCP4Q9UGJ1 667 aa18.6■□□□□ 0.57
SFXN1-208ENST00000507823 PI4K2BG5E9Z4 385 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 PPEF2O14830 753 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 ATF2P15336 505 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 PCK1P35558 622 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 GJC1P36383 396 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 PURAQ00577 322 aaKnown RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 OASLQ15646 514 aaKnown RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 HADHQ16836 314 aaKnown RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 NXF3Q9H4D5 531 aaKnown RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 NMRK2Q9NPI5 230 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 KLHL11Q9NVR0 708 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 TSPAN16Q9UKR8 245 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 NME7Q9Y5B8 376 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 CAPN15O75808 1086 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 KRT10P13645 584 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 CYP2B6P20813 491 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 IL1R2P27930 398 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 HNRNPH2P55795 449 aaKnown RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 ARHGAP17Q68EM7 881 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 CMASQ8NFW8 434 aaPredicted RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 IPO4Q8TEX9 1081 aaKnown RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 STK32AQ8WU08 396 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 MRPL45Q9BRJ2 306 aaKnown RBP18.59■□□□□ 0.57
SFXN1-208ENST00000507823 FOXP3Q9BZS1 431 aa18.59■□□□□ 0.57
SFXN1-208ENST00000507823 C17orf102A2RUQ5 167 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 KPNA6O60684 536 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 CD4P01730 458 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 SHBGP04278 402 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 MYL3P08590 195 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 ZNF143P52747 638 aaPredicted RBP18.58■□□□□ 0.57
SFXN1-208ENST00000507823 SLC29A2Q14542 456 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 TNFAIP8L3Q5GJ75 292 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 SLC35B2Q8TB61 432 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 SLC4A5Q9BY07 1137 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 SYNCQ9H7C4 482 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 ZFYVE28Q9HCC9 887 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 LRRC4CQ9HCJ2 640 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 GDAP2Q9NXN4 497 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 SLC12A6Q9UHW9 1150 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 GINS2Q9Y248 185 aa18.58■□□□□ 0.57
SFXN1-208ENST00000507823 GNAT1P11488 350 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 ITGA8P53708 1063 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 GNGT1P63211 74 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 NKX3-2P78367 333 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 BYSLQ13895 437 aaKnown RBP18.58■□□□□ 0.56
SFXN1-208ENST00000507823 FSCN1Q16658 493 aaKnown RBP18.58■□□□□ 0.56
SFXN1-208ENST00000507823 KRT71Q3SY84 523 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 ALLCQ8N6M5 410 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 CCDC114Q96M63 670 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 DNPEPQ9ULA0 475 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 HES2Q9Y543 173 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 SCN10AQ9Y5Y9 1956 aa18.58■□□□□ 0.56
SFXN1-208ENST00000507823 C2CD4BA6NLJ0 364 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 DPYSL4O14531 572 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 ENDOD1O94919 500 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 ITGAVP06756 1048 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 VCPP55072 806 aaKnown RBP18.57■□□□□ 0.56
SFXN1-208ENST00000507823 BBS12Q6ZW61 710 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 ZNF365Q70YC5 407 aa18.57■□□□□ 0.56
SFXN1-208ENST00000507823 UBA3Q8TBC4 463 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms