RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CRIP3Q6Q6R5 217 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 GADL1Q6ZQY3 521 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 FAM43BQ6ZT52 329 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 EP400NLQ6ZTU2 488 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 OTOP3Q7RTS5 596 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 CMIPQ8IY22 773 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 DTX3Q8N9I9 347 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 MORC4Q8TE76 937 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 CEP95Q96GE4 821 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 CPVLQ9H3G5 476 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 SEMA4AQ9H3S1 761 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 DLL4Q9NR61 685 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 TOPORSQ9NS56 1045 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 FBXO28Q9NVF7 368 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 SAGE1Q9NXZ1 904 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 HERC5Q9UII4 1024 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 PNMA8BQ9ULN7 279 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 KIF3AQ9Y496 699 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 AFG3L2Q9Y4W6 797 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 MRFAP1Q9Y605 127 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 ZSWIM8A7E2V4 1837 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 MYH4Q9Y623 1939 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ROBO3Q96MS0 1386 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 IGKV6D-41A0A0C4DH26 115 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 SMCHD1A6NHR9 2005 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 BTBD19C9JJ37 291 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 MAN2B1O00754 1011 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ZNF213O14771 459 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 HIP1RO75146 1068 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 KLHL18O94889 574 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 PF4V1P10720 104 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 MCM5P33992 734 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 KIF11P52732 1056 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 FKBP1BP68106 108 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 KRT85P78386 507 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 PPIL2Q13356 520 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ODF1Q14990 250 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 NECTIN1Q15223 517 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ZKSCAN8Q15776 578 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 PKN2Q16513 984 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 GPR158Q5T848 1215 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 PPP4R4Q6NUP7 873 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 TMED8Q6PL24 325 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 TMC5Q6UXY8 1006 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 MFSD6Q6ZSS7 791 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 SPRED1Q7Z699 444 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ERO1BQ86YB8 467 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 EXOC8Q8IYI6 725 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 OTUD6BQ8N6M0 293 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ZNF610Q8N9Z0 462 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 PIP4K2CQ8TBX8 421 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 SH3RF2Q8TEC5 729 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 RUFY2Q8WXA3 655 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 RPS6KC1Q96S38 1066 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 MYCBPQ99417 103 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ZDHHC5Q9C0B5 715 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 MEGF9Q9H1U4 602 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 PCIF1Q9H4Z3 704 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 CLIP2Q9UDT6 1046 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 ANAPC4Q9UJX5 808 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 GIT1Q9Y2X7 761 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 SNX14Q9Y5W7 946 aa5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-203ENST00000460928 TTC28Q96AY4 2481 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 DOCK3Q8IZD9 2030 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 MUC3AQ02505 3323 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 TSPY2A6NKD2 308 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 H0YGN5 161 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 TULP2O00295 520 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 SCDO00767 359 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 SUV39H1O43463 412 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 ORC4O43929 436 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PCDHGA12O60330 932 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 CLASP2O75122 1294 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 FSHBP01225 129 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 ASNSP08243 561 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 GOLGA8HP0CJ92 632 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 TSPY3P0CV98 308 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 TSPY8P0CW00 308 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 XRCC6P12956 609 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 RXRAP19793 462 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 GPR3P46089 330 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 SELENOPP49908 381 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 ICA1Q05084 483 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PPATQ06203 517 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 NOGQ13253 232 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 IMMTQ16891 758 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 MINDY4Q4G0A6 757 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 TMEM240Q5SV17 173 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 VASNQ6EMK4 673 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 FSTL4Q6MZW2 842 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 ZSCAN30Q86W11 494 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 DGKHQ86XP1 1220 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 NOSTRINQ8IVI9 506 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 AMOTL1Q8IY63 956 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 NLGN4XQ8N0W4 816 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 ZNF444Q8N0Y2 327 aaPredicted RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 Q8N1X5 172 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms