RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	YJL218W	P40892	196 aa	Known RBP	0.89	□□□□□ -2.27
SLU7	YDR088C	NSL1	Q12143	216 aa		0.89	□□□□□ -2.27
SLU7	YDR088C	PEX34	P25584	144 aa		0.88	□□□□□ -2.27
SLU7	YDR088C	DER1	P38307	211 aa		0.88	□□□□□ -2.27
SLU7	YDR088C	IPT1	P38954	527 aa		0.88	□□□□□ -2.27
SLU7	YDR088C	FMN1	Q03778	218 aa		0.88	□□□□□ -2.27
SLU7	YDR088C	NMA1	Q06178	401 aa	Known RBP	0.88	□□□□□ -2.27
SLU7	YDR088C	VAM10	Q08474	114 aa		0.88	□□□□□ -2.27
SLU7	YDR088C	FMP49	A0A023PZB3	126 aa		0.87	□□□□□ -2.27
SLU7	YDR088C	RPS28B	P0C0X0	67 aa	Known RBP	0.87	□□□□□ -2.27
SLU7	YDR088C	PHO13	P19881	312 aa		0.87	□□□□□ -2.27
SLU7	YDR088C	YER181C	P40097	107 aa		0.87	□□□□□ -2.27
SLU7	YDR088C	RCF2	P53721	224 aa		0.87	□□□□□ -2.27
SLU7	YDR088C	IRC19	Q07843	230 aa		0.87	□□□□□ -2.27
SLU7	YDR088C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.87	□□□□□ -2.27
SLU7	YDR088C	BUB2	P26448	306 aa	Predicted RBP	0.86	□□□□□ -2.27
SLU7	YDR088C	SRP21	P32342	167 aa		0.86	□□□□□ -2.27
SLU7	YDR088C	RFU1	Q08003	200 aa		0.86	□□□□□ -2.27
SLU7	YDR088C	ACP1	P32463	125 aa		0.85	□□□□□ -2.27
SLU7	YDR088C	MRPL24	P36525	258 aa	Predicted RBP	0.85	□□□□□ -2.27
SLU7	YDR088C	EFG1	Q3E705	233 aa	Known RBP	0.85	□□□□□ -2.27
SLU7	YDR088C	HSL1	P34244	1518 aa		0.84	□□□□□ -2.27
SLU7	YDR088C	RIF1	P29539	1916 aa		0.84	□□□□□ -2.27
SLU7	YDR088C	YGL041W-A	P0C5N3	154 aa		0.84	□□□□□ -2.27
SLU7	YDR088C	ECM31	P38122	312 aa		0.84	□□□□□ -2.27
SLU7	YDR088C	ATG8	P38182	117 aa	RIP-Chip data	0.84	□□□□□ -2.27	not detected
SLU7	YDR088C	DDR48	P18899	430 aa	Known RBP	0.83	□□□□□ -2.28
SLU7	YDR088C	TRS20	P38334	175 aa		0.83	□□□□□ -2.28
SLU7	YDR088C	PBI2	P0CT04	75 aa	Known RBP	0.82	□□□□□ -2.28
SLU7	YDR088C	YNL122C	P53921	115 aa	Predicted RBP	0.82	□□□□□ -2.28
SLU7	YDR088C	YPR153W	Q06537	140 aa		0.82	□□□□□ -2.28
SLU7	YDR088C	YPD1	Q07688	167 aa		0.82	□□□□□ -2.28
SLU7	YDR088C	PET20	Q99373	253 aa		0.82	□□□□□ -2.28
SLU7	YDR088C	ROM2	P51862	1356 aa	Known RBP	0.82	□□□□□ -2.28
SLU7	YDR088C	HYP2	P23301	157 aa	Known RBP	0.81	□□□□□ -2.28
SLU7	YDR088C	FIG1	P38224	298 aa		0.81	□□□□□ -2.28
SLU7	YDR088C	HHY1	P39982	102 aa		0.81	□□□□□ -2.28
SLU7	YDR088C	EFM5	P53200	248 aa	Known RBP	0.81	□□□□□ -2.28
SLU7	YDR088C	SEN15	Q04675	128 aa		0.81	□□□□□ -2.28
SLU7	YDR088C	RIB3	Q99258	208 aa		0.81	□□□□□ -2.28
SLU7	YDR088C	COX5B	P00425	151 aa		0.8	□□□□□ -2.28
SLU7	YDR088C	SED1	Q01589	338 aa		0.8	□□□□□ -2.28
SLU7	YDR088C	GPI11	Q06636	219 aa		0.8	□□□□□ -2.28
SLU7	YDR088C	SCS22	Q6Q595	175 aa		0.8	□□□□□ -2.28
SLU7	YDR088C	EST3	Q03096	181 aa		0.79	□□□□□ -2.28
SLU7	YDR088C	YMR320W	Q04897	101 aa		0.79	□□□□□ -2.28
SLU7	YDR088C	RRT7	Q07829	113 aa		0.79	□□□□□ -2.28
SLU7	YDR088C	RPL33A	P05744	107 aa	Known RBP	0.78	□□□□□ -2.28
SLU7	YDR088C	HAP2	P06774	265 aa		0.78	□□□□□ -2.28
SLU7	YDR088C	DIE2	P50076	525 aa		0.78	□□□□□ -2.28
SLU7	YDR088C	YHR213W-B	Q8TGK1	99 aa		0.78	□□□□□ -2.28
SLU7	YDR088C	MGR2	Q02889	113 aa		0.77	□□□□□ -2.29
SLU7	YDR088C	NHP6A	P11632	93 aa	Known RBP	0.76	□□□□□ -2.29
SLU7	YDR088C	GPI2	P46961	280 aa		0.76	□□□□□ -2.29
SLU7	YDR088C	LSM1	P47017	172 aa	Known RBP	0.76	□□□□□ -2.29
SLU7	YDR088C	MOG1	P47123	218 aa		0.76	□□□□□ -2.29
SLU7	YDR088C	ATP19	P81451	68 aa		0.76	□□□□□ -2.29
SLU7	YDR088C	YGL014C-A	P0C5N1	53 aa		0.75	□□□□□ -2.29
SLU7	YDR088C	IPI1	P38803	334 aa	Predicted RBP	0.75	□□□□□ -2.29
SLU7	YDR088C	YOR072W	Q08486	104 aa		0.75	□□□□□ -2.29
SLU7	YDR088C	RPS22A	P0C0W1	130 aa	Known RBP	0.74	□□□□□ -2.29
SLU7	YDR088C	PET54	P10834	293 aa		0.74	□□□□□ -2.29
SLU7	YDR088C	HSP12	P22943	109 aa	Known RBP	0.74	□□□□□ -2.29
SLU7	YDR088C	FYV5	P25585	152 aa		0.74	□□□□□ -2.29
SLU7	YDR088C	YGR201C	P42936	225 aa		0.74	□□□□□ -2.29
SLU7	YDR088C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.74	□□□□□ -2.29
SLU7	YDR088C	YCL001W-A	P87012	153 aa		0.73	□□□□□ -2.29
SLU7	YDR088C	YOR1	P53049	1477 aa		0.73	□□□□□ -2.29
SLU7	YDR088C	RPS1B	P23248	255 aa	Known RBP	0.72	□□□□□ -2.29
SLU7	YDR088C	CYC2	P38909	366 aa		0.72	□□□□□ -2.29
SLU7	YDR088C	TIM8	P57744	87 aa		0.72	□□□□□ -2.29
SLU7	YDR088C	MHF1	Q3E835	90 aa		0.72	□□□□□ -2.29
SLU7	YDR088C	HFA1	P32874	2273 aa		0.72	□□□□□ -2.29
SLU7	YDR088C	UBR1	P19812	1950 aa		0.72	□□□□□ -2.29
SLU7	YDR088C	RAV2	Q03956	351 aa		0.71	□□□□□ -2.3
SLU7	YDR088C	SOM1	Q05676	74 aa		0.71	□□□□□ -2.3
SLU7	YDR088C	HYM1	P32464	399 aa		0.7	□□□□□ -2.3
SLU7	YDR088C	YMR122C	Q03879	124 aa		0.7	□□□□□ -2.3
SLU7	YDR088C	SPC2	Q04969	178 aa		0.7	□□□□□ -2.3
SLU7	YDR088C	PRM3	Q08931	133 aa		0.7	□□□□□ -2.3
SLU7	YDR088C	HUT1	Q12520	339 aa		0.7	□□□□□ -2.3
SLU7	YDR088C	YLR361C-A	Q3E795	98 aa		0.7	□□□□□ -2.3
SLU7	YDR088C	ADK1	P07170	222 aa	Known RBP	0.69	□□□□□ -2.3
SLU7	YDR088C	SUI1	P32911	108 aa	Known RBP	0.69	□□□□□ -2.3
SLU7	YDR088C	RPL14A	P36105	138 aa	Known RBP	0.69	□□□□□ -2.3
SLU7	YDR088C	RPL14B	P38754	138 aa	Known RBP	0.69	□□□□□ -2.3
SLU7	YDR088C	YHR140W	P38842	239 aa		0.69	□□□□□ -2.3
SLU7	YDR088C	YMR141C	P40211	102 aa		0.69	□□□□□ -2.3
SLU7	YDR088C	RBL2	P48606	106 aa	Known RBP	0.69	□□□□□ -2.3
SLU7	YDR088C	VMA10	P48836	114 aa	Known RBP	0.69	□□□□□ -2.3
SLU7	YDR088C	PKR1	Q03880	122 aa	Known RBP	0.69	□□□□□ -2.3
SLU7	YDR088C	CSN9	Q03981	162 aa		0.69	□□□□□ -2.3
SLU7	YDR088C	PRS3	P38689	320 aa	Known RBP	0.68	□□□□□ -2.3
SLU7	YDR088C	HPM1	P40481	377 aa		0.68	□□□□□ -2.3
SLU7	YDR088C	PHB1	P40961	287 aa		0.68	□□□□□ -2.3
SLU7	YDR088C	GSC2	P40989	1895 aa		0.68	□□□□□ -2.3
SLU7	YDR088C	LST8	P41318	303 aa		0.68	□□□□□ -2.3
SLU7	YDR088C	COF1	Q03048	143 aa	Known RBP	0.68	□□□□□ -2.3
SLU7	YDR088C	TVP18	Q04767	167 aa		0.68	□□□□□ -2.3
SLU7	YDR088C	YOR376W-A	Q3E805	51 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms