RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C MST27P53176 234 aa3.44□□□□□ -1.86
CCS1YMR038C TMA20P89886 181 aaPredicted RBP3.44□□□□□ -1.86
CCS1YMR038C DCS1Q06151 350 aa3.44□□□□□ -1.86
CCS1YMR038C ADH2P00331 348 aaKnown RBP3.43□□□□□ -1.86
CCS1YMR038C CYC3P06182 269 aa3.43□□□□□ -1.86
CCS1YMR038C VMA8P32610 256 aaKnown RBP3.43□□□□□ -1.86
CCS1YMR038C FMP23P38231 175 aa3.43□□□□□ -1.86
CCS1YMR038C RBL2P48606 106 aaKnown RBP3.43□□□□□ -1.86
CCS1YMR038C ALG13P53178 202 aa3.43□□□□□ -1.86
CCS1YMR038C DYN2Q02647 92 aa3.43□□□□□ -1.86
CCS1YMR038C ATG39Q06159 398 aa3.43□□□□□ -1.86
CCS1YMR038C SCP1Q08873 200 aa3.43□□□□□ -1.86
CCS1YMR038C IES3Q12345 250 aa3.43□□□□□ -1.86
CCS1YMR038C URA5P13298 226 aaKnown RBP3.42□□□□□ -1.86
CCS1YMR038C YEL045CP32616 141 aa3.42□□□□□ -1.86
CCS1YMR038C RPS0AP32905 252 aaKnown RBP3.42□□□□□ -1.86
CCS1YMR038C PAN3P36102 679 aaPredicted RBP3.42□□□□□ -1.86
CCS1YMR038C DOG2P38773 246 aa3.42□□□□□ -1.86
CCS1YMR038C DOG1P38774 246 aa3.42□□□□□ -1.86
CCS1YMR038C JLP2P40206 208 aa3.42□□□□□ -1.86
CCS1YMR038C PRE5P40302 234 aaKnown RBP3.42□□□□□ -1.86
CCS1YMR038C AIM20P40451 204 aa3.42□□□□□ -1.86
CCS1YMR038C EST3Q03096 181 aa3.42□□□□□ -1.86
CCS1YMR038C MSH5Q12175 901 aa3.42□□□□□ -1.86
CCS1YMR038C AGC1Q12482 902 aa3.42□□□□□ -1.86
CCS1YMR038C SAL1D6W196 494 aa3.41□□□□□ -1.86
CCS1YMR038C LSM12P38828 187 aaKnown RBP3.41□□□□□ -1.86
CCS1YMR038C IRC18P47056 224 aa3.41□□□□□ -1.86
CCS1YMR038C SSU72P53538 206 aaPredicted RBP3.41□□□□□ -1.86
CCS1YMR038C GIM3P53900 129 aa3.41□□□□□ -1.86
CCS1YMR038C COX12Q01519 83 aa3.41□□□□□ -1.86
CCS1YMR038C YOR385WQ08909 290 aa3.41□□□□□ -1.86
CCS1YMR038C FEX1Q08913 375 aa3.41□□□□□ -1.86
CCS1YMR038C FEX2Q08991 375 aa3.41□□□□□ -1.86
CCS1YMR038C ATG31Q12421 196 aa3.41□□□□□ -1.86
CCS1YMR038C HTZ1Q12692 134 aaKnown RBP3.41□□□□□ -1.86
CCS1YMR038C YGL258W-AQ3E740 77 aa3.41□□□□□ -1.86
CCS1YMR038C MBA1P38300 278 aa3.4□□□□□ -1.87
CCS1YMR038C TDA4P47153 279 aa3.4□□□□□ -1.87
CCS1YMR038C MIC26P50087 233 aa3.4□□□□□ -1.87
CCS1YMR038C YGR025WP53216 100 aa3.4□□□□□ -1.87
CCS1YMR038C PAM18Q07914 168 aa3.4□□□□□ -1.87
CCS1YMR038C YNG1Q08465 219 aa3.4□□□□□ -1.87
CCS1YMR038C RAD28Q12021 506 aa3.4□□□□□ -1.87
CCS1YMR038C QCR2P07257 368 aa3.39□□□□□ -1.87
CCS1YMR038C MRPL4P36517 319 aa3.39□□□□□ -1.87
CCS1YMR038C RRT1P38192 103 aa3.39□□□□□ -1.87
CCS1YMR038C WSS1P38838 269 aa3.39□□□□□ -1.87
CCS1YMR038C BFR1P38934 470 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
CCS1YMR038C NSA2P40078 261 aaKnown RBP3.39□□□□□ -1.87
CCS1YMR038C VHS2P40463 436 aa3.39□□□□□ -1.87
CCS1YMR038C POR2P40478 281 aa3.39□□□□□ -1.87
CCS1YMR038C SER2P42941 309 aa3.39□□□□□ -1.87
CCS1YMR038C AIM25P47140 327 aa3.39□□□□□ -1.87
CCS1YMR038C ARO8P53090 500 aaKnown RBP3.39□□□□□ -1.87
CCS1YMR038C YGR050CP53231 118 aa3.39□□□□□ -1.87
CCS1YMR038C FYV6P53913 173 aa3.39□□□□□ -1.87
CCS1YMR038C HAL1Q01766 294 aa3.39□□□□□ -1.87
CCS1YMR038C PAA1Q12447 191 aaKnown RBP3.39□□□□□ -1.87
CCS1YMR038C YOR011W-AQ3E807 68 aa3.39□□□□□ -1.87
CCS1YMR038C YBL071CP38185 102 aa3.38□□□□□ -1.87
CCS1YMR038C ERV15P38312 142 aa3.38□□□□□ -1.87
CCS1YMR038C YJL027CP47063 138 aaPredicted RBP3.38□□□□□ -1.87
CCS1YMR038C CWC23P52868 283 aaPredicted RBP3.38□□□□□ -1.87
CCS1YMR038C POC4Q12245 148 aaPredicted RBP3.38□□□□□ -1.87
CCS1YMR038C GLE2P40066 365 aa3.37□□□□□ -1.87
CCS1YMR038C LSM1P47017 172 aaKnown RBP3.37□□□□□ -1.87
CCS1YMR038C YGR018CP53211 109 aa3.37□□□□□ -1.87
CCS1YMR038C VPS28Q02767 242 aa3.37□□□□□ -1.87
CCS1YMR038C FRQ1Q06389 190 aa3.37□□□□□ -1.87
CCS1YMR038C MHR1Q06630 226 aa3.37□□□□□ -1.87
CCS1YMR038C PRM7Q12459 698 aa3.37□□□□□ -1.87
CCS1YMR038C TPI1P00942 248 aaKnown RBP3.36□□□□□ -1.87
CCS1YMR038C POP5P28005 173 aa3.36□□□□□ -1.87
CCS1YMR038C IPI1P38803 334 aaPredicted RBP3.36□□□□□ -1.87
CCS1YMR038C SNF11P38956 169 aa3.36□□□□□ -1.87
CCS1YMR038C BDH1P39714 382 aa3.36□□□□□ -1.87
CCS1YMR038C LCB3P47013 409 aa3.36□□□□□ -1.87
CCS1YMR038C NIF3P53081 288 aa3.36□□□□□ -1.87
CCS1YMR038C HCH1P53834 153 aa3.36□□□□□ -1.87
CCS1YMR038C LSM7P53905 115 aaKnown RBP3.36□□□□□ -1.87
CCS1YMR038C TPT1Q12272 230 aaKnown RBP3.36□□□□□ -1.87
CCS1YMR038C RDI1Q12434 202 aa3.36□□□□□ -1.87
CCS1YMR038C YHR213WP0CI67 198 aa3.35□□□□□ -1.87
CCS1YMR038C MRP17P28778 131 aa3.35□□□□□ -1.87
CCS1YMR038C YKL162CP36052 402 aa3.35□□□□□ -1.87
CCS1YMR038C YIR035CP40579 254 aa3.35□□□□□ -1.87
CCS1YMR038C LST7P53237 242 aa3.35□□□□□ -1.87
CCS1YMR038C SPO19Q03029 223 aa3.35□□□□□ -1.87
CCS1YMR038C ADD37Q03233 198 aa3.35□□□□□ -1.87
CCS1YMR038C YMR244WQ04018 355 aa3.35□□□□□ -1.87
CCS1YMR038C LDS2Q08218 356 aa3.35□□□□□ -1.87
CCS1YMR038C YCT1Q12235 531 aa3.35□□□□□ -1.87
CCS1YMR038C YCR016WP25617 290 aaKnown RBP3.34□□□□□ -1.87
CCS1YMR038C SPT14P32363 452 aa3.34□□□□□ -1.87
CCS1YMR038C RRF1P38771 230 aa3.34□□□□□ -1.87
CCS1YMR038C GPI2P46961 280 aa3.34□□□□□ -1.87
CCS1YMR038C YJR085CP47131 105 aaKnown RBP3.34□□□□□ -1.87
CCS1YMR038C YIP3P53633 176 aa3.34□□□□□ -1.87
CCS1YMR038C SGF11Q03067 99 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms