RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C TY1B-OLQ12273 1755 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-PLQ12414 1755 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C CBF1P17106 351 aa0.98□□□□□ -2.25
SMD3YLR147C TDA4P47153 279 aa0.98□□□□□ -2.25
SMD3YLR147C YNL184CP53876 108 aa0.98□□□□□ -2.25
SMD3YLR147C YMR315WQ04869 349 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C YMR226CQ05016 267 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C IRA2P19158 3079 aa0.97□□□□□ -2.25
SMD3YLR147C SNF4P12904 322 aa0.97□□□□□ -2.25
SMD3YLR147C STP22P25604 385 aa0.97□□□□□ -2.25
SMD3YLR147C GSP2P32836 220 aaKnown RBP0.97□□□□□ -2.25
SMD3YLR147C SPC25P40014 221 aa0.97□□□□□ -2.25
SMD3YLR147C PDS1P40316 373 aaPredicted RBP0.97□□□□□ -2.25
SMD3YLR147C CUP9P41817 306 aa0.97□□□□□ -2.25
SMD3YLR147C TIM11P81449 96 aaPredicted RBP0.97□□□□□ -2.25
SMD3YLR147C MET31Q03081 177 aa0.97□□□□□ -2.25
SMD3YLR147C YLR031WQ07978 186 aa0.97□□□□□ -2.25
SMD3YLR147C TAR1Q8TGM6 124 aa0.97□□□□□ -2.25
SMD3YLR147C TY2B-BQ12491 1770 aa0.97□□□□□ -2.25
SMD3YLR147C QCR7P00128 127 aa0.96□□□□□ -2.26
SMD3YLR147C IDP1P21954 428 aaKnown RBP0.96□□□□□ -2.26
SMD3YLR147C UBC8P28263 218 aa0.96□□□□□ -2.26
SMD3YLR147C YBR242WP38331 238 aa0.96□□□□□ -2.26
SMD3YLR147C YFL019CP43576 117 aa0.96□□□□□ -2.26
SMD3YLR147C ARO80Q04052 950 aa0.96□□□□□ -2.26
SMD3YLR147C YLR036CQ07986 203 aa0.96□□□□□ -2.26
SMD3YLR147C ABP140Q08641 628 aaKnown RBP0.96□□□□□ -2.26
SMD3YLR147C NUP188P52593 1655 aaKnown RBP0.96□□□□□ -2.26
SMD3YLR147C TY1B-JR2P47100 1755 aaKnown RBP0.96□□□□□ -2.26
SMD3YLR147C TY1B-ER2Q03619 1755 aa0.96□□□□□ -2.26
SMD3YLR147C TY1B-MR1Q04214 1755 aa0.96□□□□□ -2.26
SMD3YLR147C TY1B-MR2Q04670 1755 aaKnown RBP0.96□□□□□ -2.26
SMD3YLR147C TY1B-LR1Q12088 1755 aaKnown RBP0.96□□□□□ -2.26
SMD3YLR147C TY1B-NL1Q12112 1755 aa0.96□□□□□ -2.26
SMD3YLR147C TY1B-GR1Q12141 1755 aa0.96□□□□□ -2.26
SMD3YLR147C TY1B-BLQ12490 1755 aa0.96□□□□□ -2.26
SMD3YLR147C TY3B-IQ7LHG5 1498 aaKnown RBP0.95□□□□□ -2.26
SMD3YLR147C MATALPHA2P0CY08 210 aa0.95□□□□□ -2.26
SMD3YLR147C HMLALPHA2P0CY09 210 aa0.95□□□□□ -2.26
SMD3YLR147C GPI14P47088 403 aaKnown RBP0.95□□□□□ -2.26
SMD3YLR147C MRPS17Q03246 237 aaPredicted RBP0.95□□□□□ -2.26
SMD3YLR147C VPS71Q03433 280 aa0.95□□□□□ -2.26
SMD3YLR147C PST2Q12335 198 aaKnown RBP0.95□□□□□ -2.26
SMD3YLR147C RPB4P20433 221 aaPredicted RBP0.94□□□□□ -2.26
SMD3YLR147C TRA1P38811 3744 aa0.93□□□□□ -2.26
SMD3YLR147C YCR023CP25351 611 aa0.93□□□□□ -2.26
SMD3YLR147C NTG1P31378 399 aa0.93□□□□□ -2.26
SMD3YLR147C YHL037CP38733 133 aa0.93□□□□□ -2.26
SMD3YLR147C IGO2Q9P305 131 aa0.93□□□□□ -2.26
SMD3YLR147C YLR422WQ06409 1932 aa0.93□□□□□ -2.26
SMD3YLR147C MDN1Q12019 4910 aaKnown RBP0.93□□□□□ -2.26
SMD3YLR147C TY1B-DR3Q99231 1755 aa0.93□□□□□ -2.26
SMD3YLR147C SEN1Q00416 2231 aaKnown RBP0.92□□□□□ -2.26
SMD3YLR147C UGX2P32772 223 aa0.92□□□□□ -2.26
SMD3YLR147C CWC21Q03375 135 aaKnown RBP0.92□□□□□ -2.26
SMD3YLR147C RRP17Q04031 235 aaPredicted RBP0.92□□□□□ -2.26
SMD3YLR147C ADF1Q2V2Q1 113 aa0.92□□□□□ -2.26
SMD3YLR147C CSF1Q12150 2958 aa0.92□□□□□ -2.26
SMD3YLR147C YKT6P36015 200 aaKnown RBP0.91□□□□□ -2.26
SMD3YLR147C MAK5P38112 773 aaPredicted RBP0.91□□□□□ -2.26
SMD3YLR147C MPM1P40364 252 aa0.91□□□□□ -2.26
SMD3YLR147C GET4Q12125 312 aa0.91□□□□□ -2.26
SMD3YLR147C DYN1P36022 4092 aa0.91□□□□□ -2.26
SMD3YLR147C SEC16P48415 2195 aaKnown RBP0.9□□□□□ -2.26
SMD3YLR147C SNF2P22082 1703 aa0.9□□□□□ -2.27
SMD3YLR147C JIP3O13555 125 aa0.9□□□□□ -2.27
SMD3YLR147C YGL235WP53071 178 aa0.9□□□□□ -2.27
SMD3YLR147C CGR1P53188 120 aa0.9□□□□□ -2.27
SMD3YLR147C GRX3Q03835 250 aa0.9□□□□□ -2.27
SMD3YLR147C FYV12Q08559 129 aa0.9□□□□□ -2.27
SMD3YLR147C ATP20Q12233 115 aa0.9□□□□□ -2.27
SMD3YLR147C RPL43AP0CX25 92 aaKnown RBP0.89□□□□□ -2.27
SMD3YLR147C RPL43BP0CX26 92 aa0.89□□□□□ -2.27
SMD3YLR147C AHT1P29589 182 aa0.89□□□□□ -2.27
SMD3YLR147C LYS2P07702 1392 aa0.88□□□□□ -2.27
SMD3YLR147C STF2P16965 84 aa0.88□□□□□ -2.27
SMD3YLR147C ETR1P38071 380 aa0.88□□□□□ -2.27
SMD3YLR147C TMA22P47089 198 aaPredicted RBP0.88□□□□□ -2.27
SMD3YLR147C DAS2Q12084 232 aa0.88□□□□□ -2.27
SMD3YLR147C YOR015WQ12169 119 aa0.88□□□□□ -2.27
SMD3YLR147C YOR342CQ12182 319 aa0.88□□□□□ -2.27
SMD3YLR147C YDR524C-BQ3E6R4 66 aa0.88□□□□□ -2.27
SMD3YLR147C DUR1,2P32528 1835 aaKnown RBP0.87□□□□□ -2.27
SMD3YLR147C RRP5Q05022 1729 aaKnown RBP0.87□□□□□ -2.27
SMD3YLR147C RPO41P13433 1351 aaKnown RBP0.87□□□□□ -2.27
SMD3YLR147C RPS24AP0CX31 135 aaKnown RBP0.87□□□□□ -2.27
SMD3YLR147C RPS24BP0CX32 135 aaKnown RBP0.87□□□□□ -2.27
SMD3YLR147C ADE1P27616 306 aa0.87□□□□□ -2.27
SMD3YLR147C NSA2P40078 261 aaKnown RBP0.87□□□□□ -2.27
SMD3YLR147C YFL051CP43552 160 aa0.87□□□□□ -2.27
SMD3YLR147C PGA1P53896 198 aa0.87□□□□□ -2.27
SMD3YLR147C YOL024WQ08172 172 aa0.87□□□□□ -2.27
SMD3YLR147C YLR412C-AQ3E742 68 aa0.87□□□□□ -2.27
SMD3YLR147C SEC7P11075 2009 aaKnown RBP0.87□□□□□ -2.27
SMD3YLR147C NUP192P47054 1683 aa0.87□□□□□ -2.27
SMD3YLR147C FLO1P32768 1537 aa0.86□□□□□ -2.27
SMD3YLR147C YBR056W-AI2HB52 66 aa0.86□□□□□ -2.27
SMD3YLR147C PIR1Q03178 341 aa0.86□□□□□ -2.27
SMD3YLR147C YHP1Q04116 353 aa0.86□□□□□ -2.27
SMD3YLR147C UPS1Q05776 175 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms