RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W SEC17P32602 292 aa1.87□□□□□ -2.11
SDC25YLL016W MEP2P41948 499 aa1.87□□□□□ -2.11
SDC25YLL016W RPA43P46669 326 aa1.87□□□□□ -2.11
SDC25YLL016W HHO1P53551 258 aa1.87□□□□□ -2.11
SDC25YLL016W ALG9P53868 555 aaKnown RBP1.87□□□□□ -2.11
SDC25YLL016W RPL22AP05749 121 aaKnown RBP1.87□□□□□ -2.11
SDC25YLL016W RPB3P16370 318 aaKnown RBP1.87□□□□□ -2.11
SDC25YLL016W COX10P21592 462 aa1.87□□□□□ -2.11
SDC25YLL016W YIL086CP40503 102 aa1.87□□□□□ -2.11
SDC25YLL016W PFS2P42841 465 aaKnown RBP1.87□□□□□ -2.11
SDC25YLL016W THI74Q04083 370 aa1.87□□□□□ -2.11
SDC25YLL016W STP22P25604 385 aa1.86□□□□□ -2.11
SDC25YLL016W CPR5P35176 225 aa1.86□□□□□ -2.11
SDC25YLL016W MRX8Q05473 314 aa1.86□□□□□ -2.11
SDC25YLL016W Q0144Q9ZZW2 109 aa1.86□□□□□ -2.11
SDC25YLL016W CPA1P07258 411 aaKnown RBP1.86□□□□□ -2.11
SDC25YLL016W VMA11P32842 164 aa1.86□□□□□ -2.11
SDC25YLL016W OST2P46964 130 aa1.86□□□□□ -2.11
SDC25YLL016W YGL088WP53151 121 aa1.86□□□□□ -2.11
SDC25YLL016W FMN1Q03778 218 aa1.86□□□□□ -2.11
SDC25YLL016W YPD1Q07688 167 aa1.86□□□□□ -2.11
SDC25YLL016W IES3Q12345 250 aa1.86□□□□□ -2.11
SDC25YLL016W GTT2Q12390 233 aa1.86□□□□□ -2.11
SDC25YLL016W HSP30P25619 332 aa1.86□□□□□ -2.11
SDC25YLL016W YPT53P36019 220 aa1.86□□□□□ -2.11
SDC25YLL016W CSH1P38287 376 aa1.86□□□□□ -2.11
SDC25YLL016W NSG1P38837 291 aa1.86□□□□□ -2.11
SDC25YLL016W YFR054CP43622 192 aa1.86□□□□□ -2.11
SDC25YLL016W YGL193CP53097 103 aa1.86□□□□□ -2.11
SDC25YLL016W ORM1P53224 222 aa1.86□□□□□ -2.11
SDC25YLL016W DAS2Q12084 232 aa1.86□□□□□ -2.11
SDC25YLL016W DGK1Q12382 290 aa1.86□□□□□ -2.11
SDC25YLL016W TAD3Q9URQ3 322 aa1.86□□□□□ -2.11
SDC25YLL016W RAD10P06838 210 aa1.85□□□□□ -2.11
SDC25YLL016W MRPL27P36526 146 aaPredicted RBP1.85□□□□□ -2.11
SDC25YLL016W YPL073CP40323 161 aa1.85□□□□□ -2.11
SDC25YLL016W ARC15P40518 154 aaRIP-Chip data1.85□□□□□ -2.11not detected
SDC25YLL016W SNX4P47057 423 aa1.85□□□□□ -2.11
SDC25YLL016W TRM12Q04235 462 aa1.85□□□□□ -2.11
SDC25YLL016W SDH7Q04401 133 aa1.85□□□□□ -2.11
SDC25YLL016W LDB18Q07887 179 aa1.85□□□□□ -2.11
SDC25YLL016W MCP1Q12106 302 aa1.85□□□□□ -2.11
SDC25YLL016W YDL180WQ12301 547 aa1.85□□□□□ -2.11
SDC25YLL016W YHR125WP38831 101 aa1.85□□□□□ -2.11
SDC25YLL016W PRE5P40302 234 aaKnown RBP1.85□□□□□ -2.11
SDC25YLL016W DLS1P40366 167 aa1.85□□□□□ -2.11
SDC25YLL016W SER2P42941 309 aa1.85□□□□□ -2.11
SDC25YLL016W SKI6P46948 246 aaPredicted RBP1.85□□□□□ -2.11
SDC25YLL016W DSK2P48510 373 aa1.85□□□□□ -2.11
SDC25YLL016W CYR1P08678 2026 aaKnown RBP1.84□□□□□ -2.11
SDC25YLL016W YEL028WP39989 153 aa1.84□□□□□ -2.11
SDC25YLL016W CUP9P41817 306 aa1.84□□□□□ -2.11
SDC25YLL016W GLR1P41921 483 aaKnown RBP1.84□□□□□ -2.11
SDC25YLL016W XPT1P47165 209 aa1.84□□□□□ -2.11
SDC25YLL016W NSP1P14907 823 aaKnown RBP1.84□□□□□ -2.11
SDC25YLL016W YEL073CP39974 107 aa1.84□□□□□ -2.11
SDC25YLL016W TDA4P47153 279 aa1.84□□□□□ -2.11
SDC25YLL016W TTI2P47168 421 aa1.84□□□□□ -2.11
SDC25YLL016W COF1Q03048 143 aaKnown RBP1.84□□□□□ -2.11
SDC25YLL016W FRQ1Q06389 190 aa1.84□□□□□ -2.11
SDC25YLL016W FCY1Q12178 158 aa1.84□□□□□ -2.11
SDC25YLL016W YER188WP40103 239 aa1.84□□□□□ -2.12
SDC25YLL016W ECO1P43605 281 aa1.84□□□□□ -2.12
SDC25YLL016W YDR274CP87283 123 aa1.84□□□□□ -2.12
SDC25YLL016W SMD1Q02260 146 aaPredicted RBP1.84□□□□□ -2.12
SDC25YLL016W YTH1Q06102 208 aaPredicted RBP1.84□□□□□ -2.12
SDC25YLL016W HRD1Q08109 551 aa1.84□□□□□ -2.12
SDC25YLL016W TIM9O74700 87 aa1.83□□□□□ -2.12
SDC25YLL016W YHR032W-AP0C5N6 59 aa1.83□□□□□ -2.12
SDC25YLL016W TIR1P10863 254 aa1.83□□□□□ -2.12
SDC25YLL016W RPS1AP33442 255 aaKnown RBP1.83□□□□□ -2.12
SDC25YLL016W PAN3P36102 679 aaPredicted RBP1.83□□□□□ -2.12
SDC25YLL016W FMP23P38231 175 aa1.83□□□□□ -2.12
SDC25YLL016W GLC8P41818 229 aa1.83□□□□□ -2.12
SDC25YLL016W SBH1P52870 82 aa1.83□□□□□ -2.12
SDC25YLL016W IGO1P53897 168 aa1.83□□□□□ -2.12
SDC25YLL016W APJ1P53940 528 aa1.83□□□□□ -2.12
SDC25YLL016W YDR366CP87287 132 aa1.83□□□□□ -2.12
SDC25YLL016W YMR320WQ04897 101 aa1.83□□□□□ -2.12
SDC25YLL016W PRP11Q07350 266 aaPredicted RBP1.83□□□□□ -2.12
SDC25YLL016W PSF1Q12488 208 aa1.83□□□□□ -2.12
SDC25YLL016W YIR021W-AQ3E739 70 aa1.83□□□□□ -2.12
SDC25YLL016W YOR032W-AQ8TGS1 66 aa1.83□□□□□ -2.12
SDC25YLL016W REP2P03872 296 aa1.83□□□□□ -2.12
SDC25YLL016W RPL9AP05738 191 aaKnown RBP1.83□□□□□ -2.12
SDC25YLL016W ATP15P21306 62 aa1.83□□□□□ -2.12
SDC25YLL016W TOM40P23644 387 aaKnown RBP1.83□□□□□ -2.12
SDC25YLL016W MRPL24P36525 258 aaPredicted RBP1.83□□□□□ -2.12
SDC25YLL016W RPS20P38701 121 aaKnown RBP1.83□□□□□ -2.12
SDC25YLL016W GON7P46984 123 aa1.83□□□□□ -2.12
SDC25YLL016W RPL9BP51401 191 aaKnown RBP1.83□□□□□ -2.12
SDC25YLL016W CAB4P53332 305 aa1.83□□□□□ -2.12
SDC25YLL016W YMR099CQ03161 297 aaKnown RBP1.83□□□□□ -2.12
SDC25YLL016W SWC7Q06707 132 aa1.83□□□□□ -2.12
SDC25YLL016W ATP14Q12349 124 aa1.83□□□□□ -2.12
SDC25YLL016W WIP1Q2V2P8 89 aa1.83□□□□□ -2.12
SDC25YLL016W FAS1P07149 2051 aaKnown RBP1.83□□□□□ -2.12
SDC25YLL016W DYN1P36022 4092 aa1.82□□□□□ -2.12
SDC25YLL016W SGA1P08019 549 aa1.82□□□□□ -2.12
SDC25YLL016W ATP5P09457 212 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms