RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C COX5AP00424 153 aa1.46□□□□□ -2.18
VPS35YJL154C ERG24P32462 438 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C SHE2P36068 246 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
VPS35YJL154C YKR032WP36127 104 aa1.46□□□□□ -2.18
VPS35YJL154C MRPL15P36523 253 aa1.46□□□□□ -2.18
VPS35YJL154C TRS20P38334 175 aa1.46□□□□□ -2.18
VPS35YJL154C GLR1P41921 483 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C YJL028WP47062 111 aa1.46□□□□□ -2.18
VPS35YJL154C HHT1P61830 136 aa1.46□□□□□ -2.18
VPS35YJL154C GEP5Q12393 293 aa1.46□□□□□ -2.18
VPS35YJL154C YBL112CQ3E7Y4 105 aa1.46□□□□□ -2.18
VPS35YJL154C IPP1P00817 287 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C RPL2AP0CX45 254 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C RPL2BP0CX46 254 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C PEX34P25584 144 aa1.46□□□□□ -2.18
VPS35YJL154C RPC19P28000 142 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C PTC1P35182 281 aa1.46□□□□□ -2.18
VPS35YJL154C RPF1P38805 295 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C AYR1P40471 297 aa1.46□□□□□ -2.18
VPS35YJL154C GVP36P40531 326 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C APQ12P40532 138 aa1.46□□□□□ -2.18
VPS35YJL154C LSM8P47093 109 aaKnown RBP1.46□□□□□ -2.18
VPS35YJL154C AIM25P47140 327 aa1.46□□□□□ -2.18
VPS35YJL154C YGL088WP53151 121 aa1.46□□□□□ -2.18
VPS35YJL154C SLM2P53955 656 aa1.46□□□□□ -2.18
VPS35YJL154C SPG4Q04438 115 aa1.46□□□□□ -2.18
VPS35YJL154C SCP1Q08873 200 aa1.46□□□□□ -2.18
VPS35YJL154C HAP2P06774 265 aa1.45□□□□□ -2.18
VPS35YJL154C PHO85P17157 305 aa1.45□□□□□ -2.18
VPS35YJL154C SEC59P20048 519 aa1.45□□□□□ -2.18
VPS35YJL154C MOB1P40484 314 aa1.45□□□□□ -2.18
VPS35YJL154C XPT1P47165 209 aa1.45□□□□□ -2.18
VPS35YJL154C DAD3P69850 94 aa1.45□□□□□ -2.18
VPS35YJL154C FCF2Q12035 217 aaPredicted RBP1.45□□□□□ -2.18
VPS35YJL154C UBR2Q07963 1872 aa1.45□□□□□ -2.18
VPS35YJL154C VAR1P02381 398 aa1.45□□□□□ -2.18
VPS35YJL154C ATG22P25568 528 aa1.45□□□□□ -2.18
VPS35YJL154C YKL102CP34249 101 aa1.45□□□□□ -2.18
VPS35YJL154C YHL026CP38740 315 aa1.45□□□□□ -2.18
VPS35YJL154C HHO1P53551 258 aa1.45□□□□□ -2.18
VPS35YJL154C LSM7P53905 115 aaKnown RBP1.45□□□□□ -2.18
VPS35YJL154C YNL046WP53956 172 aa1.45□□□□□ -2.18
VPS35YJL154C DIG2Q03373 323 aaKnown RBP1.45□□□□□ -2.18
VPS35YJL154C AIM36Q03798 255 aa1.45□□□□□ -2.18
VPS35YJL154C SHH4Q06236 168 aa1.45□□□□□ -2.18
VPS35YJL154C ACC1Q00955 2233 aaKnown RBP1.45□□□□□ -2.18
VPS35YJL154C YHR139C-AO13536 103 aa1.44□□□□□ -2.18
VPS35YJL154C SNF4P12904 322 aa1.44□□□□□ -2.18
VPS35YJL154C STP22P25604 385 aa1.44□□□□□ -2.18
VPS35YJL154C MIG1P27705 504 aa1.44□□□□□ -2.18
VPS35YJL154C SNC2P33328 115 aa1.44□□□□□ -2.18
VPS35YJL154C HMF1P40037 129 aaKnown RBP1.44□□□□□ -2.18
VPS35YJL154C PEX17P40155 199 aa1.44□□□□□ -2.18
VPS35YJL154C OST2P46964 130 aa1.44□□□□□ -2.18
VPS35YJL154C MNN5P46982 586 aa1.44□□□□□ -2.18
VPS35YJL154C AIF1P52923 378 aa1.44□□□□□ -2.18
VPS35YJL154C YGR039WP53225 103 aa1.44□□□□□ -2.18
VPS35YJL154C CAB4P53332 305 aa1.44□□□□□ -2.18
VPS35YJL154C LSM3P57743 89 aaKnown RBP1.44□□□□□ -2.18
VPS35YJL154C YKR005CQ02203 525 aa1.44□□□□□ -2.18
VPS35YJL154C YLR179CQ06252 201 aaKnown RBP1.44□□□□□ -2.18
VPS35YJL154C YOL160WQ08321 113 aa1.44□□□□□ -2.18
VPS35YJL154C DGA1Q08650 418 aa1.44□□□□□ -2.18
VPS35YJL154C YOR342CQ12182 319 aa1.44□□□□□ -2.18
VPS35YJL154C YPR011CQ12251 326 aa1.44□□□□□ -2.18
VPS35YJL154C SMT3Q12306 101 aaKnown RBP1.44□□□□□ -2.18
VPS35YJL154C RAD10P06838 210 aa1.44□□□□□ -2.18
VPS35YJL154C SPS2P08459 502 aa1.44□□□□□ -2.18
VPS35YJL154C YER039C-AP0CD97 72 aa1.44□□□□□ -2.18
VPS35YJL154C PRE1P22141 198 aaKnown RBP1.44□□□□□ -2.18
VPS35YJL154C SPO13P23624 291 aa1.44□□□□□ -2.18
VPS35YJL154C SEC17P32602 292 aa1.44□□□□□ -2.18
VPS35YJL154C APS1P35181 156 aa1.44□□□□□ -2.18
VPS35YJL154C MED6P38782 295 aa1.44□□□□□ -2.18
VPS35YJL154C YPL073CP40323 161 aa1.44□□□□□ -2.18
VPS35YJL154C YJL144WP47009 104 aa1.44□□□□□ -2.18
VPS35YJL154C YGR219WP53307 113 aa1.44□□□□□ -2.18
VPS35YJL154C PGA1P53896 198 aa1.44□□□□□ -2.18
VPS35YJL154C YDR366CP87287 132 aa1.44□□□□□ -2.18
VPS35YJL154C THI74Q04083 370 aa1.44□□□□□ -2.18
VPS35YJL154C YOR186WQ08560 144 aa1.44□□□□□ -2.18
VPS35YJL154C FEX1Q08913 375 aa1.44□□□□□ -2.18
VPS35YJL154C FEX2Q08991 375 aa1.44□□□□□ -2.18
VPS35YJL154C YLR118CQ12354 227 aa1.44□□□□□ -2.18
VPS35YJL154C MPD1Q12404 318 aaKnown RBP1.44□□□□□ -2.18
VPS35YJL154C FMP49A0A023PZB3 126 aa1.44□□□□□ -2.18
VPS35YJL154C CCA1P21269 546 aa1.44□□□□□ -2.18
VPS35YJL154C CSH1P38287 376 aa1.44□□□□□ -2.18
VPS35YJL154C YER188WP40103 239 aa1.44□□□□□ -2.18
VPS35YJL154C DLS1P40366 167 aa1.44□□□□□ -2.18
VPS35YJL154C IGO1P53897 168 aa1.44□□□□□ -2.18
VPS35YJL154C VPS28Q02767 242 aa1.44□□□□□ -2.18
VPS35YJL154C VPS71Q03433 280 aa1.44□□□□□ -2.18
VPS35YJL154C MSA1Q08471 629 aa1.44□□□□□ -2.18
VPS35YJL154C KRE1P17260 313 aa1.43□□□□□ -2.18
VPS35YJL154C PTM1P32857 523 aa1.43□□□□□ -2.18
VPS35YJL154C YKR070WP36151 352 aaKnown RBP1.43□□□□□ -2.18
VPS35YJL154C YBR063CP38083 404 aa1.43□□□□□ -2.18
VPS35YJL154C YFR054CP43622 192 aa1.43□□□□□ -2.18
VPS35YJL154C MRH4P53166 561 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms