RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W REE1P40893 198 aa3.17□□□□□ -1.9
PTR3YFR029W CUP9P41817 306 aa3.17□□□□□ -1.9
PTR3YFR029W YGL118CP53132 145 aa3.17□□□□□ -1.9
PTR3YFR029W YDR274CP87283 123 aa3.17□□□□□ -1.9
PTR3YFR029W ELC1Q03071 99 aa3.17□□□□□ -1.9
PTR3YFR029W DDP1Q99321 188 aaKnown RBP3.17□□□□□ -1.9
PTR3YFR029W KRE5P22023 1365 aa3.16□□□□□ -1.9
PTR3YFR029W NOP1P15646 327 aaKnown RBP3.16□□□□□ -1.9
PTR3YFR029W YAR068WP39564 161 aa3.16□□□□□ -1.9
PTR3YFR029W EAF6P47128 113 aa3.16□□□□□ -1.9
PTR3YFR029W SMD1Q02260 146 aaPredicted RBP3.16□□□□□ -1.9
PTR3YFR029W PIN3Q06449 215 aa3.16□□□□□ -1.9
PTR3YFR029W MYO2P19524 1574 aaKnown RBP3.16□□□□□ -1.9
PTR3YFR029W RPL9AP05738 191 aaKnown RBP3.15□□□□□ -1.9
PTR3YFR029W VMA11P32842 164 aa3.15□□□□□ -1.9
PTR3YFR029W SDH3P33421 198 aa3.15□□□□□ -1.9
PTR3YFR029W SKG1P36169 355 aa3.15□□□□□ -1.9
PTR3YFR029W RPL9BP51401 191 aaKnown RBP3.15□□□□□ -1.9
PTR3YFR029W ATP20Q12233 115 aa3.15□□□□□ -1.9
PTR3YFR029W PST1Q12355 444 aa3.15□□□□□ -1.9
PTR3YFR029W GTT2Q12390 233 aa3.15□□□□□ -1.9
PTR3YFR029W YNL162W-AQ3E7A8 72 aa3.15□□□□□ -1.9
PTR3YFR029W KTI11Q3E840 82 aa3.15□□□□□ -1.9
PTR3YFR029W YAL067W-AQ8TGK6 75 aa3.15□□□□□ -1.9
PTR3YFR029W TIM9O74700 87 aa3.15□□□□□ -1.91
PTR3YFR029W PEX4P29340 183 aa3.15□□□□□ -1.91
PTR3YFR029W SWD3P38123 315 aa3.15□□□□□ -1.91
PTR3YFR029W ASP1P38986 381 aaPredicted RBP3.15□□□□□ -1.91
PTR3YFR029W YER134CP40081 178 aa3.15□□□□□ -1.91
PTR3YFR029W YER135CP40082 130 aa3.15□□□□□ -1.91
PTR3YFR029W FIS1P40515 155 aa3.15□□□□□ -1.91
PTR3YFR029W RSM27P53305 110 aa3.15□□□□□ -1.91
PTR3YFR029W SCW4P53334 386 aaKnown RBP3.15□□□□□ -1.91
PTR3YFR029W TVP15Q03860 143 aa3.15□□□□□ -1.91
PTR3YFR029W SPG3Q04398 127 aaPredicted RBP3.15□□□□□ -1.91
PTR3YFR029W SYM1Q06563 197 aa3.15□□□□□ -1.91
PTR3YFR029W POL1P13382 1468 aa3.15□□□□□ -1.91
PTR3YFR029W SCC2Q04002 1493 aa3.15□□□□□ -1.91
PTR3YFR029W YPK9Q12697 1472 aa3.15□□□□□ -1.91
PTR3YFR029W YCR050CP25630 102 aa3.14□□□□□ -1.91
PTR3YFR029W MIG3P39943 394 aa3.14□□□□□ -1.91
PTR3YFR029W GON7P46984 123 aa3.14□□□□□ -1.91
PTR3YFR029W EMC4P53073 190 aa3.14□□□□□ -1.91
PTR3YFR029W YOL085CQ99345 113 aa3.14□□□□□ -1.91
PTR3YFR029W UFD4P33202 1483 aa3.14□□□□□ -1.91
PTR3YFR029W HYP2P23301 157 aaKnown RBP3.14□□□□□ -1.91
PTR3YFR029W RNP1P32385 249 aa3.14□□□□□ -1.91
PTR3YFR029W SFT2P38166 215 aa3.14□□□□□ -1.91
PTR3YFR029W SMD3P43321 101 aaKnown RBP3.14□□□□□ -1.91
PTR3YFR029W MPC3P53311 146 aa3.14□□□□□ -1.91
PTR3YFR029W SAY1P53324 424 aa3.14□□□□□ -1.91
PTR3YFR029W UPS1Q05776 175 aa3.14□□□□□ -1.91
PTR3YFR029W MMS22Q06164 1454 aa3.13□□□□□ -1.91
PTR3YFR029W PRE1P22141 198 aaKnown RBP3.13□□□□□ -1.91
PTR3YFR029W CCS1P40202 249 aaKnown RBP3.13□□□□□ -1.91
PTR3YFR029W PAM16P42949 149 aa3.13□□□□□ -1.91
PTR3YFR029W RCE1Q03530 315 aa3.13□□□□□ -1.91
PTR3YFR029W YOR097CQ12274 175 aaPredicted RBP3.13□□□□□ -1.91
PTR3YFR029W GPI18P38211 433 aa3.12□□□□□ -1.91
PTR3YFR029W YAL064WP39711 94 aa3.12□□□□□ -1.91
PTR3YFR029W NSA2P40078 261 aaKnown RBP3.12□□□□□ -1.91
PTR3YFR029W YMR103CQ04436 120 aa3.12□□□□□ -1.91
PTR3YFR029W PBA1Q05778 276 aa3.12□□□□□ -1.91
PTR3YFR029W ODC2Q99297 307 aa3.12□□□□□ -1.91
PTR3YFR029W RKR1Q04781 1562 aa3.12□□□□□ -1.91
PTR3YFR029W POR1P04840 283 aaKnown RBP3.12□□□□□ -1.91
PTR3YFR029W RRT13P40042 185 aa3.12□□□□□ -1.91
PTR3YFR029W GNA1P43577 159 aaPredicted RBP3.12□□□□□ -1.91
PTR3YFR029W IGD1P43598 195 aa3.12□□□□□ -1.91
PTR3YFR029W LSM8P47093 109 aaKnown RBP3.12□□□□□ -1.91
PTR3YFR029W RPO31P04051 1460 aa3.11□□□□□ -1.91
PTR3YFR029W FLO11P08640 1367 aa3.11□□□□□ -1.91
PTR3YFR029W YEL009C-AA0A023PZF2 135 aa3.11□□□□□ -1.91
PTR3YFR029W YHR125WP38831 101 aa3.11□□□□□ -1.91
PTR3YFR029W PTH1P38876 190 aaKnown RBP3.11□□□□□ -1.91
PTR3YFR029W SNU13P39990 126 aaKnown RBP3.11□□□□□ -1.91
PTR3YFR029W NSE4P43124 402 aa3.11□□□□□ -1.91
PTR3YFR029W CSI2Q08054 341 aa3.11□□□□□ -1.91
PTR3YFR029W FEX1Q08913 375 aa3.11□□□□□ -1.91
PTR3YFR029W FEX2Q08991 375 aa3.11□□□□□ -1.91
PTR3YFR029W YPR063CQ12160 140 aa3.11□□□□□ -1.91
PTR3YFR029W YBR298C-AQ8TGK4 73 aa3.11□□□□□ -1.91
PTR3YFR029W SAS5Q99314 248 aa3.11□□□□□ -1.91
PTR3YFR029W PDR11P40550 1411 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-LR1P0C2J3 1770 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-FP0CX63 1770 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-GR2P0CX64 1770 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-CP25384 1770 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-DR2Q03494 1770 aa3.11□□□□□ -1.91
PTR3YFR029W TY1B-DR1Q03855 1755 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-DR3Q07791 1770 aaKnown RBP3.11□□□□□ -1.91
PTR3YFR029W TY2B-OR1Q12113 1770 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-DR1Q12472 1770 aa3.11□□□□□ -1.91
PTR3YFR029W TY2B-OR2Q12501 1770 aa3.11□□□□□ -1.91
PTR3YFR029W UBR1P19812 1950 aa3.11□□□□□ -1.91
PTR3YFR029W HAP3P13434 144 aa3.1□□□□□ -1.91
PTR3YFR029W YET1P35723 206 aa3.1□□□□□ -1.91
PTR3YFR029W YCF1P39109 1515 aaKnown RBP3.1□□□□□ -1.91
PTR3YFR029W ADH3P07246 375 aaKnown RBP3.1□□□□□ -1.91
PTR3YFR029W CPA1P07258 411 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms