RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C VOA1P53262 265 aa2.99□□□□□ -1.93
RPN6YDL097C SCW4P53334 386 aaKnown RBP2.99□□□□□ -1.93
RPN6YDL097C HCH1P53834 153 aa2.99□□□□□ -1.93
RPN6YDL097C PGA1P53896 198 aa2.99□□□□□ -1.93
RPN6YDL097C SDO1Q07953 250 aaKnown RBP2.99□□□□□ -1.93
RPN6YDL097C VAM10Q08474 114 aa2.99□□□□□ -1.93
RPN6YDL097C TIM18Q08749 192 aa2.99□□□□□ -1.93
RPN6YDL097C YPR013CQ12145 317 aa2.99□□□□□ -1.93
RPN6YDL097C AGC1Q12482 902 aa2.99□□□□□ -1.93
RPN6YDL097C COA6Q3E846 104 aa2.99□□□□□ -1.93
RPN6YDL097C HTB1P02293 131 aaKnown RBP2.98□□□□□ -1.93
RPN6YDL097C HTB2P02294 131 aa2.98□□□□□ -1.93
RPN6YDL097C RPL12AP0CX53 165 aaKnown RBP2.98□□□□□ -1.93
RPN6YDL097C RPL12BP0CX54 165 aa2.98□□□□□ -1.93
RPN6YDL097C RPS18AP0CX55 146 aaKnown RBP2.98□□□□□ -1.93
RPN6YDL097C RPS18BP0CX56 146 aaPredicted RBP2.98□□□□□ -1.93
RPN6YDL097C MATALPHA1P0CY06 175 aa2.98□□□□□ -1.93
RPN6YDL097C HMLALPHA1P0CY07 175 aa2.98□□□□□ -1.93
RPN6YDL097C MAG1P22134 296 aaKnown RBP2.98□□□□□ -1.93
RPN6YDL097C YCR001WP25347 104 aa2.98□□□□□ -1.93
RPN6YDL097C HOM6P31116 359 aaKnown RBP2.98□□□□□ -1.93
RPN6YDL097C SSS1P35179 80 aa2.98□□□□□ -1.93
RPN6YDL097C MST28P39552 234 aa2.98□□□□□ -1.93
RPN6YDL097C NSE4P43124 402 aa2.98□□□□□ -1.93
RPN6YDL097C MST27P53176 234 aa2.98□□□□□ -1.93
RPN6YDL097C SAY1P53324 424 aa2.98□□□□□ -1.93
RPN6YDL097C FIT1Q04433 528 aa2.98□□□□□ -1.93
RPN6YDL097C ANT1Q06497 328 aa2.98□□□□□ -1.93
RPN6YDL097C MRPL35Q06678 367 aa2.98□□□□□ -1.93
RPN6YDL097C QCR7P00128 127 aa2.97□□□□□ -1.93
RPN6YDL097C PUT1P09368 476 aa2.97□□□□□ -1.93
RPN6YDL097C ATP5P09457 212 aa2.97□□□□□ -1.93
RPN6YDL097C SEC59P20048 519 aa2.97□□□□□ -1.93
RPN6YDL097C YCR043CP25361 127 aa2.97□□□□□ -1.93
RPN6YDL097C ATG8P38182 117 aaRIP-Chip data2.97□□□□□ -1.93not detected
RPN6YDL097C GCV3P39726 170 aaPredicted RBP2.97□□□□□ -1.93
RPN6YDL097C HPA3P39979 161 aa2.97□□□□□ -1.93
RPN6YDL097C SMB1P40018 196 aaKnown RBP2.97□□□□□ -1.93
RPN6YDL097C RRG9P40156 214 aa2.97□□□□□ -1.93
RPN6YDL097C CDC40P40968 455 aaPredicted RBP2.97□□□□□ -1.93
RPN6YDL097C ERJ5P43613 295 aaPredicted RBP2.97□□□□□ -1.93
RPN6YDL097C MCM22P47167 239 aa2.97□□□□□ -1.93
RPN6YDL097C OST6Q03723 332 aa2.97□□□□□ -1.93
RPN6YDL097C RUB1Q03919 77 aa2.97□□□□□ -1.93
RPN6YDL097C ATC1Q04005 294 aa2.97□□□□□ -1.93
RPN6YDL097C CUE4Q04201 117 aaPredicted RBP2.97□□□□□ -1.93
RPN6YDL097C DFM1Q12743 341 aaKnown RBP2.97□□□□□ -1.93
RPN6YDL097C YEL009C-AA0A023PZF2 135 aa2.96□□□□□ -1.93
RPN6YDL097C GSP1P32835 219 aaKnown RBP2.96□□□□□ -1.93
RPN6YDL097C GSP2P32836 220 aaKnown RBP2.96□□□□□ -1.93
RPN6YDL097C SRY1P36007 326 aa2.96□□□□□ -1.93
RPN6YDL097C YBR013CP38215 129 aa2.96□□□□□ -1.93
RPN6YDL097C YPT31P38555 223 aaKnown RBP2.96□□□□□ -1.93
RPN6YDL097C TAD2P47058 250 aa2.96□□□□□ -1.93
RPN6YDL097C DAN1P47178 298 aa2.96□□□□□ -1.93
RPN6YDL097C TIM21P53220 239 aa2.96□□□□□ -1.93
RPN6YDL097C YLR152CP54072 576 aa2.96□□□□□ -1.93
RPN6YDL097C LPP1Q04396 274 aa2.96□□□□□ -1.93
RPN6YDL097C SCP1Q08873 200 aa2.96□□□□□ -1.93
RPN6YDL097C YPR145C-AQ2V2P0 78 aa2.96□□□□□ -1.93
RPN6YDL097C YOR192C-CQ3E736 78 aa2.96□□□□□ -1.93
RPN6YDL097C YDL085C-AQ3E7B7 68 aaKnown RBP2.96□□□□□ -1.93
RPN6YDL097C ZRC1P20107 442 aa2.95□□□□□ -1.94
RPN6YDL097C PRE7P23724 241 aaKnown RBP2.95□□□□□ -1.94
RPN6YDL097C MSK1P32048 576 aa2.95□□□□□ -1.94
RPN6YDL097C OAC1P32332 324 aa2.95□□□□□ -1.94
RPN6YDL097C HMX1P32339 317 aa2.95□□□□□ -1.94
RPN6YDL097C SPS18P32572 300 aa2.95□□□□□ -1.94
RPN6YDL097C SFK1P35735 353 aa2.95□□□□□ -1.94
RPN6YDL097C AIM29P36154 155 aa2.95□□□□□ -1.94
RPN6YDL097C ASP1P38986 381 aaPredicted RBP2.95□□□□□ -1.94
RPN6YDL097C SUR2P38992 349 aa2.95□□□□□ -1.94
RPN6YDL097C AIM10P39965 576 aaKnown RBP2.95□□□□□ -1.94
RPN6YDL097C CCS1P40202 249 aaKnown RBP2.95□□□□□ -1.94
RPN6YDL097C YGL185CP53100 379 aa2.95□□□□□ -1.94
RPN6YDL097C FMP41P53889 259 aaKnown RBP2.95□□□□□ -1.94
RPN6YDL097C BUD25P85052 153 aa2.95□□□□□ -1.94
RPN6YDL097C CAB5Q03941 241 aa2.95□□□□□ -1.94
RPN6YDL097C VBA1Q04301 562 aa2.95□□□□□ -1.94
RPN6YDL097C ELP6Q04868 273 aa2.95□□□□□ -1.94
RPN6YDL097C FRQ1Q06389 190 aa2.95□□□□□ -1.94
RPN6YDL097C LDS2Q08218 356 aa2.95□□□□□ -1.94
RPN6YDL097C FYV7Q12247 151 aa2.95□□□□□ -1.94
RPN6YDL097C YOP1Q12402 180 aa2.95□□□□□ -1.94
RPN6YDL097C YPL229WQ99395 206 aa2.95□□□□□ -1.94
RPN6YDL097C VPS63O13549 108 aa2.94□□□□□ -1.94
RPN6YDL097C FUN14P18411 198 aa2.94□□□□□ -1.94
RPN6YDL097C MIR1P23641 311 aaKnown RBP2.94□□□□□ -1.94
RPN6YDL097C PET18P25362 215 aa2.94□□□□□ -1.94
RPN6YDL097C SHG1P38337 142 aa2.94□□□□□ -1.94
RPN6YDL097C PAU15P40585 124 aa2.94□□□□□ -1.94
RPN6YDL097C AIM25P47140 327 aa2.94□□□□□ -1.94
RPN6YDL097C SNO1Q03144 224 aa2.94□□□□□ -1.94
RPN6YDL097C TVP18Q04767 167 aa2.94□□□□□ -1.94
RPN6YDL097C CSM4Q08955 156 aa2.94□□□□□ -1.94
RPN6YDL097C AYT1Q12226 474 aa2.94□□□□□ -1.94
RPN6YDL097C TPT1Q12272 230 aaKnown RBP2.94□□□□□ -1.94
RPN6YDL097C ADH3P07246 375 aaKnown RBP2.93□□□□□ -1.94
RPN6YDL097C URA6P15700 204 aa2.93□□□□□ -1.94
RPN6YDL097C RPB3P16370 318 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms