RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	SNF4	P12904	322 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	MSI1	P13712	422 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	1.29	□□□□□ -2.2	not detected
SSK2	YNR031C	RFA2	P26754	273 aa	Known RBP	1.29	□□□□□ -2.2
SSK2	YNR031C	PRE2	P30656	287 aa	Known RBP	1.29	□□□□□ -2.2
SSK2	YNR031C	IES6	P32617	166 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	ALK2	P32789	676 aa	Predicted RBP	1.29	□□□□□ -2.2
SSK2	YNR031C	PEX22	P39718	180 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	ERJ5	P43613	295 aa	Predicted RBP	1.29	□□□□□ -2.2
SSK2	YNR031C	KEG1	P43614	200 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	SPC1	P46965	94 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	CIS3	P47001	227 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	GWT1	P47026	490 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	WSC2	P53832	503 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	UBC7	Q02159	165 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	TMA23	Q03525	211 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	INP1	Q03694	420 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	SEI1	Q06058	285 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	NAT5	Q08689	176 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	NIP7	Q08962	181 aa	Known RBP	1.29	□□□□□ -2.2
SSK2	YNR031C	YPR202W	Q08993	238 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	SPC3	Q12133	184 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	YKL018C-A	Q3E7A7	99 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	YHR213W-A	Q8TGT4	77 aa		1.29	□□□□□ -2.2
SSK2	YNR031C	CYC3	P06182	269 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YMR31	P19955	123 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	POF1	P25576	258 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YHL042W	P38729	150 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	GEP4	P38812	185 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YEA4	P40004	342 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	GAT2	P40209	560 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YIL152W	P40455	235 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	OST3	P48439	350 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	GEP7	P53171	287 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YNR071C	P53757	342 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YMR166C	Q03829	368 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	ELP6	Q04868	273 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	FCF1	Q05498	189 aa	Predicted RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	PFA4	Q12006	378 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	TFC7	Q12415	435 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	FOL3	Q12676	427 aa	Predicted RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	RPL27A	P0C2H6	136 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	RPL27B	P0C2H7	136 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	CAP2	P13517	287 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	TFS1	P14306	219 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	RPB3	P16370	318 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	FCY2	P17064	533 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	MRP49	P32388	137 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	MNS1	P32906	549 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YER076C	P40049	302 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YFL012W	P43580	148 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	ATG18	P43601	500 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	CIN2	P46670	268 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	UBC9	P50623	157 aa	Predicted RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	SUT1	P53032	299 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	ALG13	P53178	202 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	FRE4	P53746	719 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	ALG9	P53868	555 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	RPL21A	Q02753	160 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	PIR1	Q03178	341 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	AIM36	Q03798	255 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	HNT1	Q04344	158 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	RRT7	Q07829	113 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	TRM13	Q12383	476 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	RPL21B	Q12672	160 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	SAL1	D6W196	494 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	SGA1	P08019	549 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	RPL20A	P0CX23	172 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	RPL20B	P0CX24	172 aa	Predicted RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	MAK32	P23060	363 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	RNQ1	P25367	405 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	EMP24	P32803	203 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	NTF2	P33331	125 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	RRT1	P38192	103 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YHR130C	P38834	111 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	CHL4	P38907	458 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	IRC18	P47056	224 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	RCE1	Q03530	315 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YLR224W	Q05947	369 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	HEM25	Q07534	307 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YLR042C	Q07990	161 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YLR412C-A	Q3E742	68 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	SCS22	Q6Q595	175 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	DET1	Q99288	334 aa	Known RBP	1.28	□□□□□ -2.2
SSK2	YNR031C	UBA3	Q99344	299 aa		1.28	□□□□□ -2.2
SSK2	YNR031C	YPS1	P32329	569 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	AIM26	P32858	118 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	TEM1	P38987	245 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	CCS1	P40202	249 aa	Known RBP	1.28	□□□□□ -2.21
SSK2	YNR031C	SIM1	P40472	476 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	POP6	P53218	158 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	YGR039W	P53225	103 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	YGR045C	P53229	120 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	LSM7	P53905	115 aa	Known RBP	1.28	□□□□□ -2.21
SSK2	YNR031C	ERI1	P62651	68 aa	Known RBP	1.28	□□□□□ -2.21
SSK2	YNR031C	VPS28	Q02767	242 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	PIN3	Q06449	215 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	ALG6	Q12001	544 aa	Known RBP	1.28	□□□□□ -2.21
SSK2	YNR031C	NAG1	Q8TGN9	163 aa		1.28	□□□□□ -2.21
SSK2	YNR031C	COX1	P00401	534 aa		1.27	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms