RNA–Protein interactions for RNA: YMR180C

CTL1, Transcript of RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm, yeastyeast

Gene CTL1, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTL1YMR180C SMD2Q06217 110 aaKnown RBP1.68□□□□□ -2.14
CTL1YMR180C YOL014WQ08110 124 aa1.68□□□□□ -2.14
CTL1YMR180C NSL1Q12143 216 aa1.68□□□□□ -2.14
CTL1YMR180C RDI1Q12434 202 aa1.68□□□□□ -2.14
CTL1YMR180C NSP1P14907 823 aaKnown RBP1.67□□□□□ -2.14
CTL1YMR180C SPO13P23624 291 aa1.67□□□□□ -2.14
CTL1YMR180C RME1P32338 300 aaKnown RBP1.67□□□□□ -2.14
CTL1YMR180C UBC6P33296 250 aaPredicted RBP1.67□□□□□ -2.14
CTL1YMR180C FMP23P38231 175 aa1.67□□□□□ -2.14
CTL1YMR180C TVP23P38962 199 aa1.67□□□□□ -2.14
CTL1YMR180C YDL180WQ12301 547 aa1.67□□□□□ -2.14
CTL1YMR180C POR1P04840 283 aaKnown RBP1.66□□□□□ -2.14
CTL1YMR180C BUB2P26448 306 aaPredicted RBP1.66□□□□□ -2.14
CTL1YMR180C SRP102P36057 244 aaPredicted RBP1.66□□□□□ -2.14
CTL1YMR180C NSA2P40078 261 aaKnown RBP1.66□□□□□ -2.14
CTL1YMR180C SBH2P52871 88 aa1.66□□□□□ -2.14
CTL1YMR180C YGL235WP53071 178 aa1.66□□□□□ -2.14
CTL1YMR180C VPS28Q02767 242 aa1.66□□□□□ -2.14
CTL1YMR180C YMR099CQ03161 297 aaKnown RBP1.66□□□□□ -2.14
CTL1YMR180C YPR127WQ06494 345 aa1.66□□□□□ -2.14
CTL1YMR180C RAD28Q12021 506 aa1.66□□□□□ -2.14
CTL1YMR180C YOR214CQ12282 236 aa1.66□□□□□ -2.14
CTL1YMR180C DGK1Q12382 290 aa1.66□□□□□ -2.14
CTL1YMR180C YNL146C-AQ3E7Z1 64 aa1.66□□□□□ -2.14
CTL1YMR180C SEC11P15367 167 aa1.65□□□□□ -2.15
CTL1YMR180C DER1P38307 211 aa1.65□□□□□ -2.15
CTL1YMR180C EDC3P39998 551 aaKnown RBP1.65□□□□□ -2.15
CTL1YMR180C YFL019CP43576 117 aa1.65□□□□□ -2.15
CTL1YMR180C TTI2P47168 421 aa1.65□□□□□ -2.15
CTL1YMR180C EFG1Q3E705 233 aaKnown RBP1.65□□□□□ -2.15
CTL1YMR180C FAS1P07149 2051 aaKnown RBP1.65□□□□□ -2.15
CTL1YMR180C VAR1P02381 398 aa1.64□□□□□ -2.15
CTL1YMR180C IDP1P21954 428 aaKnown RBP1.64□□□□□ -2.15
CTL1YMR180C HSP30P25619 332 aa1.64□□□□□ -2.15
CTL1YMR180C YGL101WP53144 215 aa1.64□□□□□ -2.15
CTL1YMR180C YPR174CQ06616 221 aaPredicted RBP1.64□□□□□ -2.15
CTL1YMR180C YPD1Q07688 167 aa1.64□□□□□ -2.15
CTL1YMR180C RAD6P06104 172 aa1.63□□□□□ -2.15
CTL1YMR180C AQY2P0CD90 149 aa1.63□□□□□ -2.15
CTL1YMR180C TIR1P10863 254 aa1.63□□□□□ -2.15
CTL1YMR180C STP22P25604 385 aa1.63□□□□□ -2.15
CTL1YMR180C SFK1P35735 353 aa1.63□□□□□ -2.15
CTL1YMR180C SPC25P40014 221 aa1.63□□□□□ -2.15
CTL1YMR180C RIO2P40160 425 aaKnown RBP1.63□□□□□ -2.15
CTL1YMR180C YKR005CQ02203 525 aa1.63□□□□□ -2.15
CTL1YMR180C PKR1Q03880 122 aaKnown RBP1.63□□□□□ -2.15
CTL1YMR180C RRP17Q04031 235 aaPredicted RBP1.63□□□□□ -2.15
CTL1YMR180C YDR391CQ04170 232 aa1.63□□□□□ -2.15
CTL1YMR180C YMR253CQ04835 414 aa1.63□□□□□ -2.15
CTL1YMR180C NAT3Q06504 195 aa1.63□□□□□ -2.15
CTL1YMR180C YHR007C-AQ07074 71 aa1.63□□□□□ -2.15
CTL1YMR180C YAP3P38749 330 aa1.62□□□□□ -2.15
CTL1YMR180C DLS1P40366 167 aa1.62□□□□□ -2.15
CTL1YMR180C SBH1P52870 82 aa1.62□□□□□ -2.15
CTL1YMR180C MPC3P53311 146 aa1.62□□□□□ -2.15
CTL1YMR180C LSM3P57743 89 aaKnown RBP1.62□□□□□ -2.15
CTL1YMR180C RAV2Q03956 351 aa1.62□□□□□ -2.15
CTL1YMR180C IRC23Q08416 157 aa1.62□□□□□ -2.15
CTL1YMR180C YOR015WQ12169 119 aa1.62□□□□□ -2.15
CTL1YMR180C PET20Q99373 253 aa1.62□□□□□ -2.15
CTL1YMR180C TRM3Q07527 1436 aa1.62□□□□□ -2.15
CTL1YMR180C PEX34P25584 144 aa1.61□□□□□ -2.15
CTL1YMR180C GSP2P32836 220 aaKnown RBP1.61□□□□□ -2.15
CTL1YMR180C PAM17P36147 197 aa1.61□□□□□ -2.15
CTL1YMR180C APQ12P40532 138 aa1.61□□□□□ -2.15
CTL1YMR180C LSM1P47017 172 aaKnown RBP1.61□□□□□ -2.15
CTL1YMR180C MOG1P47123 218 aa1.61□□□□□ -2.15
CTL1YMR180C HHT1P61830 136 aa1.61□□□□□ -2.15
CTL1YMR180C HSK3P69852 69 aa1.61□□□□□ -2.15
CTL1YMR180C THI74Q04083 370 aa1.61□□□□□ -2.15
CTL1YMR180C DAS2Q12084 232 aa1.61□□□□□ -2.15
CTL1YMR180C YPR013CQ12145 317 aa1.61□□□□□ -2.15
CTL1YMR180C UBI4P0CG63 381 aaKnown RBP1.6□□□□□ -2.15
CTL1YMR180C YRA2P36036 203 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
CTL1YMR180C DAD4P69851 72 aa1.6□□□□□ -2.15
CTL1YMR180C PIR1Q03178 341 aa1.6□□□□□ -2.15
CTL1YMR180C PRP11Q07350 266 aaPredicted RBP1.6□□□□□ -2.15
CTL1YMR180C HRD1Q08109 551 aa1.6□□□□□ -2.15
CTL1YMR180C TAF2P23255 1407 aa1.59□□□□□ -2.15
CTL1YMR180C PET54P10834 293 aa1.59□□□□□ -2.15
CTL1YMR180C PHO85P17157 305 aa1.59□□□□□ -2.15
CTL1YMR180C NQM1P53228 333 aaPredicted RBP1.59□□□□□ -2.15
CTL1YMR180C YNL033WP53964 284 aa1.59□□□□□ -2.15
CTL1YMR180C DIG2Q03373 323 aaKnown RBP1.59□□□□□ -2.15
CTL1YMR180C GAL83Q04739 417 aa1.59□□□□□ -2.15
CTL1YMR180C ATP20Q12233 115 aa1.59□□□□□ -2.15
CTL1YMR180C YLR046CQ12253 270 aa1.59□□□□□ -2.15
CTL1YMR180C ATP5P09457 212 aa1.58□□□□□ -2.16
CTL1YMR180C YCR023CP25351 611 aa1.58□□□□□ -2.16
CTL1YMR180C PTC1P35182 281 aa1.58□□□□□ -2.16
CTL1YMR180C RRT1P38192 103 aa1.58□□□□□ -2.16
CTL1YMR180C SOK1P40317 901 aa1.58□□□□□ -2.16
CTL1YMR180C YPL073CP40323 161 aa1.58□□□□□ -2.16
CTL1YMR180C RCE1Q03530 315 aa1.58□□□□□ -2.16
CTL1YMR180C SYM1Q06563 197 aa1.58□□□□□ -2.16
CTL1YMR180C MDM35O60200 86 aa1.57□□□□□ -2.16
CTL1YMR180C RPL30P14120 105 aaKnown RBP1.57□□□□□ -2.16
CTL1YMR180C MAK31P23059 88 aa1.57□□□□□ -2.16
CTL1YMR180C RPC19P28000 142 aaKnown RBP1.57□□□□□ -2.16
CTL1YMR180C YEL073CP39974 107 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 530.1 ms