RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W YLR046CQ12253 270 aa2.36□□□□□ -2.03
CTM1YHR109W YLR412C-AQ3E742 68 aa2.36□□□□□ -2.03
CTM1YHR109W YOR1P53049 1477 aa2.35□□□□□ -2.03
CTM1YHR109W RAS2P01120 322 aaKnown RBP2.35□□□□□ -2.03
CTM1YHR109W LSM3P57743 89 aaKnown RBP2.35□□□□□ -2.03
CTM1YHR109W GAL83Q04739 417 aa2.35□□□□□ -2.03
CTM1YHR109W RPO41P13433 1351 aaKnown RBP2.34□□□□□ -2.03
CTM1YHR109W PEX4P29340 183 aa2.34□□□□□ -2.03
CTM1YHR109W FZF1P32805 299 aa2.34□□□□□ -2.03
CTM1YHR109W YOR062CP36025 268 aa2.34□□□□□ -2.03
CTM1YHR109W PHO88P38264 188 aaPredicted RBP2.34□□□□□ -2.03
CTM1YHR109W FYV4P38783 130 aaPredicted RBP2.34□□□□□ -2.03
CTM1YHR109W YGR201CP42936 225 aa2.34□□□□□ -2.03
CTM1YHR109W MOG1P47123 218 aa2.34□□□□□ -2.03
CTM1YHR109W YMR295CQ03559 197 aa2.34□□□□□ -2.03
CTM1YHR109W WIP1Q2V2P8 89 aa2.34□□□□□ -2.03
CTM1YHR109W SCL1P21243 252 aaKnown RBP2.33□□□□□ -2.04
CTM1YHR109W HSP30P25619 332 aa2.33□□□□□ -2.04
CTM1YHR109W CLB6P32943 380 aa2.33□□□□□ -2.04
CTM1YHR109W PAM17P36147 197 aa2.33□□□□□ -2.04
CTM1YHR109W YNL200CP40165 246 aaKnown RBP2.33□□□□□ -2.04
CTM1YHR109W APQ12P40532 138 aa2.33□□□□□ -2.04
CTM1YHR109W YMR253CQ04835 414 aa2.33□□□□□ -2.04
CTM1YHR109W YLR361C-AQ3E795 98 aa2.33□□□□□ -2.04
CTM1YHR109W SNT2P53127 1403 aa2.33□□□□□ -2.04
CTM1YHR109W PBI2P0CT04 75 aaKnown RBP2.33□□□□□ -2.04
CTM1YHR109W RPL30P14120 105 aaKnown RBP2.33□□□□□ -2.04
CTM1YHR109W NOP1P15646 327 aaKnown RBP2.33□□□□□ -2.04
CTM1YHR109W SPC25P40014 221 aa2.33□□□□□ -2.04
CTM1YHR109W YNL217WP40152 326 aa2.33□□□□□ -2.04
CTM1YHR109W CUP9P41817 306 aa2.33□□□□□ -2.04
CTM1YHR109W YOR214CQ12282 236 aa2.33□□□□□ -2.04
CTM1YHR109W TOP2P06786 1428 aaKnown RBP2.33□□□□□ -2.04
CTM1YHR109W STP22P25604 385 aa2.32□□□□□ -2.04
CTM1YHR109W YCR101CP25607 182 aa2.32□□□□□ -2.04
CTM1YHR109W YBR220CP38318 560 aa2.32□□□□□ -2.04
CTM1YHR109W IPI1P38803 334 aaPredicted RBP2.32□□□□□ -2.04
CTM1YHR109W YJR015WP47090 510 aa2.32□□□□□ -2.04
CTM1YHR109W HHT1P61830 136 aa2.32□□□□□ -2.04
CTM1YHR109W CYT2Q00873 224 aa2.32□□□□□ -2.04
CTM1YHR109W DYN2Q02647 92 aa2.32□□□□□ -2.04
CTM1YHR109W IRC23Q08416 157 aa2.32□□□□□ -2.04
CTM1YHR109W ATP20Q12233 115 aa2.32□□□□□ -2.04
CTM1YHR109W EMC6Q12431 108 aa2.32□□□□□ -2.04
CTM1YHR109W Q0144Q9ZZW2 109 aa2.32□□□□□ -2.04
CTM1YHR109W SSN2P38931 1420 aa2.31□□□□□ -2.04
CTM1YHR109W IDP1P21954 428 aaKnown RBP2.31□□□□□ -2.04
CTM1YHR109W RPS1AP33442 255 aaKnown RBP2.31□□□□□ -2.04
CTM1YHR109W YHR022CP38763 256 aa2.31□□□□□ -2.04
CTM1YHR109W NSA2P40078 261 aaKnown RBP2.31□□□□□ -2.04
CTM1YHR109W XPT1P47165 209 aa2.31□□□□□ -2.04
CTM1YHR109W CCC1P47818 322 aa2.31□□□□□ -2.04
CTM1YHR109W TIM13P53299 105 aa2.31□□□□□ -2.04
CTM1YHR109W SHH3Q04487 196 aa2.31□□□□□ -2.04
CTM1YHR109W YLR236CA0A023PZG4 107 aa2.31□□□□□ -2.04
CTM1YHR109W KIN28P06242 306 aa2.31□□□□□ -2.04
CTM1YHR109W NHP6AP11632 93 aaKnown RBP2.31□□□□□ -2.04
CTM1YHR109W NMT1P14743 455 aa2.31□□□□□ -2.04
CTM1YHR109W HPM1P40481 377 aa2.31□□□□□ -2.04
CTM1YHR109W GLR1P41921 483 aaKnown RBP2.31□□□□□ -2.04
CTM1YHR109W VPS28Q02767 242 aa2.31□□□□□ -2.04
CTM1YHR109W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
CTM1YHR109W RIB3Q99258 208 aa2.31□□□□□ -2.04
CTM1YHR109W ATG40Q99325 256 aa2.31□□□□□ -2.04
CTM1YHR109W PRS3P38689 320 aaKnown RBP2.3□□□□□ -2.04
CTM1YHR109W DLS1P40366 167 aa2.3□□□□□ -2.04
CTM1YHR109W YFR054CP43622 192 aa2.3□□□□□ -2.04
CTM1YHR109W FIP1P45976 327 aa2.3□□□□□ -2.04
CTM1YHR109W PKR1Q03880 122 aaKnown RBP2.3□□□□□ -2.04
CTM1YHR109W RAV2Q03956 351 aa2.3□□□□□ -2.04
CTM1YHR109W ATP5P09457 212 aa2.29□□□□□ -2.04
CTM1YHR109W YEL028WP39989 153 aa2.29□□□□□ -2.04
CTM1YHR109W DAN1P47178 298 aa2.29□□□□□ -2.04
CTM1YHR109W YGL193CP53097 103 aa2.29□□□□□ -2.04
CTM1YHR109W YNL033WP53964 284 aa2.29□□□□□ -2.04
CTM1YHR109W YKR005CQ02203 525 aa2.29□□□□□ -2.04
CTM1YHR109W RUB1Q03919 77 aa2.29□□□□□ -2.04
CTM1YHR109W RAD28Q12021 506 aa2.29□□□□□ -2.04
CTM1YHR109W BUD23P25627 275 aaPredicted RBP2.28□□□□□ -2.04
CTM1YHR109W GSP1P32835 219 aaKnown RBP2.28□□□□□ -2.04
CTM1YHR109W GSP2P32836 220 aaKnown RBP2.28□□□□□ -2.04
CTM1YHR109W PTC1P35182 281 aa2.28□□□□□ -2.04
CTM1YHR109W SHE2P36068 246 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
CTM1YHR109W RRT1P38192 103 aa2.28□□□□□ -2.04
CTM1YHR109W GAA1P39012 614 aa2.28□□□□□ -2.04
CTM1YHR109W TIM8P57744 87 aa2.28□□□□□ -2.04
CTM1YHR109W YPL225WQ08971 146 aaKnown RBP2.28□□□□□ -2.04
CTM1YHR109W UTR5P32630 166 aa2.28□□□□□ -2.04
CTM1YHR109W UGX2P32772 223 aa2.28□□□□□ -2.04
CTM1YHR109W GLC8P41818 229 aa2.28□□□□□ -2.04
CTM1YHR109W CSN9Q03981 162 aa2.28□□□□□ -2.04
CTM1YHR109W DUR1,2P32528 1835 aaKnown RBP2.27□□□□□ -2.05
CTM1YHR109W RAD6P06104 172 aa2.27□□□□□ -2.05
CTM1YHR109W SUI1P32911 108 aaKnown RBP2.27□□□□□ -2.05
CTM1YHR109W ERG25P53045 309 aa2.27□□□□□ -2.05
CTM1YHR109W RGM1Q00453 211 aa2.27□□□□□ -2.05
CTM1YHR109W ARL3Q02804 198 aa2.27□□□□□ -2.05
CTM1YHR109W YMR320WQ04897 101 aa2.27□□□□□ -2.05
CTM1YHR109W LDB18Q07887 179 aa2.27□□□□□ -2.05
CTM1YHR109W MET5P47169 1442 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms