RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W LTE1P07866 1435 aa2.16□□□□□ -2.06
SPO20YMR017W IKI3Q06706 1349 aaKnown RBP2.16□□□□□ -2.06
SPO20YMR017W IQG1Q12280 1495 aa2.15□□□□□ -2.06
SPO20YMR017W URA5P13298 226 aaKnown RBP2.15□□□□□ -2.07
SPO20YMR017W MER1P16523 270 aa2.15□□□□□ -2.07
SPO20YMR017W BET1P22804 142 aa2.15□□□□□ -2.07
SPO20YMR017W YCR087C-AP37263 153 aa2.15□□□□□ -2.07
SPO20YMR017W GLE2P40066 365 aa2.15□□□□□ -2.07
SPO20YMR017W GPM2Q12008 311 aa2.15□□□□□ -2.07
SPO20YMR017W FSF1Q12029 327 aaKnown RBP2.15□□□□□ -2.07
SPO20YMR017W YFR032C-BQ8TGU2 87 aa2.15□□□□□ -2.07
SPO20YMR017W YOR093CQ12275 1648 aa2.15□□□□□ -2.07
SPO20YMR017W NUP188P52593 1655 aaKnown RBP2.15□□□□□ -2.07
SPO20YMR017W RPL25P04456 142 aaKnown RBP2.14□□□□□ -2.07
SPO20YMR017W CDC36P06100 191 aaPredicted RBP2.14□□□□□ -2.07
SPO20YMR017W MAG1P22134 296 aaKnown RBP2.14□□□□□ -2.07
SPO20YMR017W RFA3P26755 122 aaKnown RBP2.14□□□□□ -2.07
SPO20YMR017W YBR220CP38318 560 aa2.14□□□□□ -2.07
SPO20YMR017W TRM5P38793 499 aa2.14□□□□□ -2.07
SPO20YMR017W SRB8P25648 1427 aa2.14□□□□□ -2.07
SPO20YMR017W USO1P25386 1790 aa2.13□□□□□ -2.07
SPO20YMR017W HTB1P02293 131 aaKnown RBP2.13□□□□□ -2.07
SPO20YMR017W HTB2P02294 131 aa2.13□□□□□ -2.07
SPO20YMR017W RPL13BP40212 199 aaKnown RBP2.13□□□□□ -2.07
SPO20YMR017W COG5P53951 403 aa2.13□□□□□ -2.07
SPO20YMR017W MDM32Q12171 622 aa2.13□□□□□ -2.07
SPO20YMR017W RPL13AQ12690 199 aaPredicted RBP2.13□□□□□ -2.07
SPO20YMR017W TRM3Q07527 1436 aa2.13□□□□□ -2.07
SPO20YMR017W MLP1Q02455 1875 aaKnown RBP2.12□□□□□ -2.07
SPO20YMR017W RPB3P16370 318 aaKnown RBP2.12□□□□□ -2.07
SPO20YMR017W TMA19P35691 167 aaKnown RBP2.12□□□□□ -2.07
SPO20YMR017W YKT6P36015 200 aaKnown RBP2.12□□□□□ -2.07
SPO20YMR017W YBR285WP38354 144 aa2.12□□□□□ -2.07
SPO20YMR017W SAY1P53324 424 aa2.12□□□□□ -2.07
SPO20YMR017W ANT1Q06497 328 aa2.12□□□□□ -2.07
SPO20YMR017W YOL160WQ08321 113 aa2.12□□□□□ -2.07
SPO20YMR017W YNG1Q08465 219 aa2.12□□□□□ -2.07
SPO20YMR017W DNF3Q12674 1656 aa2.12□□□□□ -2.07
SPO20YMR017W VMR1P38735 1592 aa2.11□□□□□ -2.07
SPO20YMR017W MMS1Q06211 1407 aa2.11□□□□□ -2.07
SPO20YMR017W RPL2AP0CX45 254 aaKnown RBP2.11□□□□□ -2.07
SPO20YMR017W RPL2BP0CX46 254 aaKnown RBP2.11□□□□□ -2.07
SPO20YMR017W YDR274CP87283 123 aa2.11□□□□□ -2.07
SPO20YMR017W YRA1Q12159 226 aaKnown RBP2.11□□□□□ -2.07
SPO20YMR017W ATG40Q99325 256 aa2.11□□□□□ -2.07
SPO20YMR017W PDR5P33302 1511 aaKnown RBP2.11□□□□□ -2.07
SPO20YMR017W YSP2Q06681 1438 aa2.1□□□□□ -2.07
SPO20YMR017W FPR1P20081 114 aaKnown RBP2.1□□□□□ -2.07
SPO20YMR017W ATP15P21306 62 aa2.1□□□□□ -2.07
SPO20YMR017W HMF1P40037 129 aaKnown RBP2.1□□□□□ -2.07
SPO20YMR017W ERJ5P43613 295 aaPredicted RBP2.1□□□□□ -2.07
SPO20YMR017W MZM1Q03429 123 aaPredicted RBP2.1□□□□□ -2.07
SPO20YMR017W IML1P47170 1584 aa2.1□□□□□ -2.07
SPO20YMR017W NUP192P47054 1683 aa2.09□□□□□ -2.07
SPO20YMR017W CPA1P07258 411 aaKnown RBP2.09□□□□□ -2.07
SPO20YMR017W TFC1P32367 649 aa2.09□□□□□ -2.07
SPO20YMR017W UPS2P35200 230 aa2.09□□□□□ -2.07
SPO20YMR017W SHE2P36068 246 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SPO20YMR017W YBR209WP38311 105 aa2.09□□□□□ -2.07
SPO20YMR017W AIM25P47140 327 aa2.09□□□□□ -2.07
SPO20YMR017W CUS2P53830 285 aaPredicted RBP2.09□□□□□ -2.07
SPO20YMR017W NUP49Q02199 472 aa2.09□□□□□ -2.07
SPO20YMR017W YMR226CQ05016 267 aaKnown RBP2.09□□□□□ -2.07
SPO20YMR017W GPA2P10823 449 aa2.08□□□□□ -2.08
SPO20YMR017W CBF1P17106 351 aa2.08□□□□□ -2.08
SPO20YMR017W CKS1P20486 150 aaKnown RBP2.08□□□□□ -2.08
SPO20YMR017W RFC4P40339 323 aaKnown RBP2.08□□□□□ -2.08
SPO20YMR017W POP3P53833 195 aaPredicted RBP2.08□□□□□ -2.08
SPO20YMR017W KNH1P50112 268 aa2.07□□□□□ -2.08
SPO20YMR017W CWC21Q03375 135 aaKnown RBP2.07□□□□□ -2.08
SPO20YMR017W GGA1Q06336 557 aa2.07□□□□□ -2.08
SPO20YMR017W TY1B-NL2Q99337 1749 aaKnown RBP2.07□□□□□ -2.08
SPO20YMR017W TY4B-HP0C2J7 1802 aa2.07□□□□□ -2.08
SPO20YMR017W TY4B-JP47024 1803 aa2.07□□□□□ -2.08
SPO20YMR017W YLR236CA0A023PZG4 107 aa2.06□□□□□ -2.08
SPO20YMR017W SIR2P06700 562 aa2.06□□□□□ -2.08
SPO20YMR017W QCR8P08525 94 aa2.06□□□□□ -2.08
SPO20YMR017W RPL27AP0C2H6 136 aaKnown RBP2.06□□□□□ -2.08
SPO20YMR017W MATALPHA2P0CY08 210 aa2.06□□□□□ -2.08
SPO20YMR017W HMLALPHA2P0CY09 210 aa2.06□□□□□ -2.08
SPO20YMR017W YCL012CQ8J0M4 134 aa2.06□□□□□ -2.08
SPO20YMR017W HNT1Q04344 158 aaKnown RBP2.05□□□□□ -2.08
SPO20YMR017W ADF1Q2V2Q1 113 aa2.05□□□□□ -2.08
SPO20YMR017W GET1P53192 235 aa2.04□□□□□ -2.08
SPO20YMR017W ABP140Q08641 628 aaKnown RBP2.04□□□□□ -2.08
SPO20YMR017W GET4Q12125 312 aa2.04□□□□□ -2.08
SPO20YMR017W RIO1Q12196 484 aaKnown RBP2.04□□□□□ -2.08
SPO20YMR017W UBR2Q07963 1872 aa2.03□□□□□ -2.08
SPO20YMR017W FKS3Q04952 1785 aa2.03□□□□□ -2.08
SPO20YMR017W YRF1-2P40105 1681 aa2.03□□□□□ -2.08
SPO20YMR017W HAP1P0CE41 1502 aa2.03□□□□□ -2.08
SPO20YMR017W PDR11P40550 1411 aa2.03□□□□□ -2.08
SPO20YMR017W OCH1P31755 480 aa2.03□□□□□ -2.08
SPO20YMR017W KDX1P36005 433 aa2.03□□□□□ -2.08
SPO20YMR017W OPY1P38271 328 aa2.03□□□□□ -2.08
SPO20YMR017W ERG10P41338 398 aaKnown RBP2.03□□□□□ -2.08
SPO20YMR017W MMS2P53152 137 aa2.03□□□□□ -2.08
SPO20YMR017W CGR1P53188 120 aa2.03□□□□□ -2.08
SPO20YMR017W MRPS17Q03246 237 aaPredicted RBP2.03□□□□□ -2.08
SPO20YMR017W CUE4Q04201 117 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 142.9 ms